RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 CFAP65Q6ZU64 1925 aaKnown RBP11.09□□□□□ -0.63
NUP43-206ENST00000543637 CAMSAP1Q5T5Y3 1602 aa11.09□□□□□ -0.63
NUP43-206ENST00000543637 PTPRTO14522 1441 aa11.09□□□□□ -0.63
NUP43-206ENST00000543637 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
NUP43-206ENST00000543637 FAM135AQ9P2D6 1515 aa11.08□□□□□ -0.64
NUP43-206ENST00000543637 PTPRKQ15262 1439 aa11.08□□□□□ -0.64
NUP43-206ENST00000543637 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
NUP43-206ENST00000543637 KDM5DQ9BY66 1539 aa11.07□□□□□ -0.64
NUP43-206ENST00000543637 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
NUP43-206ENST00000543637 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
NUP43-206ENST00000543637 EIF2AK4Q9P2K8 1649 aaKnown RBP11.06□□□□□ -0.64
NUP43-206ENST00000543637 FBXO31Q5XUX0 539 aaPredicted RBP11.06□□□□□ -0.64
NUP43-206ENST00000543637 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
NUP43-206ENST00000543637 DUOX2Q9NRD8 1548 aa11.05□□□□□ -0.64
NUP43-206ENST00000543637 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
NUP43-206ENST00000543637 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
NUP43-206ENST00000543637 CEP170BQ9Y4F5 1589 aaPredicted RBP11.05□□□□□ -0.64
NUP43-206ENST00000543637 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
NUP43-206ENST00000543637 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
NUP43-206ENST00000543637 TNRQ92752 1358 aa11.04□□□□□ -0.64
NUP43-206ENST00000543637 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
NUP43-206ENST00000543637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.642e-7■□□□□ 8
NUP43-206ENST00000543637 CHIC2Q9UKJ5 165 aa11.04□□□□□ -0.64
NUP43-206ENST00000543637 A2ML1A8K2U0 1454 aa11.04□□□□□ -0.64
NUP43-206ENST00000543637 FGD6Q6ZV73 1430 aa11.03□□□□□ -0.64
NUP43-206ENST00000543637 PZPP20742 1482 aa11.03□□□□□ -0.64
NUP43-206ENST00000543637 CEP152O94986 1710 aa11.03□□□□□ -0.64
NUP43-206ENST00000543637 KANK1Q14678 1352 aa11.03□□□□□ -0.64
NUP43-206ENST00000543637 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
NUP43-206ENST00000543637 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.64
NUP43-206ENST00000543637 RNF17Q9BXT8 1623 aaKnown RBP11.02□□□□□ -0.64
NUP43-206ENST00000543637 DAPK1P53355 1430 aa11.02□□□□□ -0.64
NUP43-206ENST00000543637 PLA2R1Q13018 1463 aa11.02□□□□□ -0.65
NUP43-206ENST00000543637 ANKLE2Q86XL3 938 aa11.02□□□□□ -0.65
NUP43-206ENST00000543637 KIF15Q9NS87 1388 aa11.02□□□□□ -0.65
NUP43-206ENST00000543637 ABCC5O15440 1437 aa11.01□□□□□ -0.65
NUP43-206ENST00000543637 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
NUP43-206ENST00000543637 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
NUP43-206ENST00000543637 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
NUP43-206ENST00000543637 NLRP1Q9C000 1473 aa11□□□□□ -0.65
NUP43-206ENST00000543637 UGGT1Q9NYU2 1555 aa10.99□□□□□ -0.65
NUP43-206ENST00000543637 ERBINQ96RT1 1412 aa10.99□□□□□ -0.65
NUP43-206ENST00000543637 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
NUP43-206ENST00000543637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
NUP43-206ENST00000543637 ABCC3O15438 1527 aa10.98□□□□□ -0.65
NUP43-206ENST00000543637 IQSEC2Q5JU85 1478 aa10.96□□□□□ -0.65
NUP43-206ENST00000543637 ZNF335Q9H4Z2 1342 aaPredicted RBP10.96□□□□□ -0.65
NUP43-206ENST00000543637 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
NUP43-206ENST00000543637 SPATA31D1Q6ZQQ2 1576 aa10.95□□□□□ -0.66
NUP43-206ENST00000543637 MROH1Q8NDA8 1641 aa10.95□□□□□ -0.66
NUP43-206ENST00000543637 EID1Q9Y6B2 187 aa10.94□□□□□ -0.66
NUP43-206ENST00000543637 ERVK-7P63135 1459 aa10.93□□□□□ -0.66
NUP43-206ENST00000543637 ARHGAP31Q2M1Z3 1444 aa10.93□□□□□ -0.66
NUP43-206ENST00000543637 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
NUP43-206ENST00000543637 ITGAEP38570 1179 aa10.93□□□□□ -0.66
NUP43-206ENST00000543637 PPARGC1BQ86YN6 1023 aaKnown RBP10.93□□□□□ -0.66
NUP43-206ENST00000543637 DEPDC5O75140 1603 aa10.93□□□□□ -0.66
NUP43-206ENST00000543637 PRDM15P57071 1507 aaPredicted RBP10.93□□□□□ -0.66
NUP43-206ENST00000543637 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
NUP43-206ENST00000543637 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
NUP43-206ENST00000543637 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
NUP43-206ENST00000543637 MSH5O43196 834 aa10.91□□□□□ -0.66
NUP43-206ENST00000543637 POTEDQ86YR6 584 aa10.91□□□□□ -0.66
NUP43-206ENST00000543637 ADGRL2O95490 1459 aa10.91□□□□□ -0.66
NUP43-206ENST00000543637 IQGAP1P46940 1657 aa10.9□□□□□ -0.66
NUP43-206ENST00000543637 TOM1O60784 492 aa10.9□□□□□ -0.66
NUP43-206ENST00000543637 HDGFP51858 240 aaKnown RBP10.9□□□□□ -0.66
NUP43-206ENST00000543637 ANKRD50Q9ULJ7 1429 aa10.9□□□□□ -0.66
NUP43-206ENST00000543637 CPS1P31327 1500 aa10.89□□□□□ -0.67
NUP43-206ENST00000543637 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
NUP43-206ENST00000543637 MED14O60244 1454 aa10.89□□□□□ -0.67
NUP43-206ENST00000543637 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
NUP43-206ENST00000543637 NEURL4Q96JN8 1562 aa10.89□□□□□ -0.67
NUP43-206ENST00000543637 PIK3C2BO00750 1634 aa10.88□□□□□ -0.67
NUP43-206ENST00000543637 IDI1Q13907 227 aa10.88□□□□□ -0.67
NUP43-206ENST00000543637 BCANQ96GW7 911 aa10.88□□□□□ -0.67
NUP43-206ENST00000543637 LMTK2Q8IWU2 1503 aa10.88□□□□□ -0.67
NUP43-206ENST00000543637 KDM5AP29375 1690 aaKnown RBP10.86□□□□□ -0.67
NUP43-206ENST00000543637 GCC2Q8IWJ2 1684 aa10.86□□□□□ -0.67
NUP43-206ENST00000543637 PIP4K2BP78356 416 aa10.86□□□□□ -0.67
NUP43-206ENST00000543637 ROCK1Q13464 1354 aa10.86□□□□□ -0.67
NUP43-206ENST00000543637 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
NUP43-206ENST00000543637 VWDEQ8N2E2 1590 aa10.86□□□□□ -0.67
NUP43-206ENST00000543637 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
NUP43-206ENST00000543637 LTKP29376 864 aa10.85□□□□□ -0.67
NUP43-206ENST00000543637 RPRD2Q5VT52 1461 aaKnown RBP10.85□□□□□ -0.67
NUP43-206ENST00000543637 TET3O43151 1660 aa10.85□□□□□ -0.67
NUP43-206ENST00000543637 SLIT1O75093 1534 aa10.84□□□□□ -0.67
NUP43-206ENST00000543637 EFCAB6Q5THR3 1501 aa10.84□□□□□ -0.67
NUP43-206ENST00000543637 TMEM2Q9UHN6 1383 aa10.83□□□□□ -0.68
NUP43-206ENST00000543637 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 MYO5BQ9ULV0 1848 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 NUP155O75694 1391 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 DISP3Q9P2K9 1392 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 PPP1R15AO75807 674 aaPredicted RBP10.82□□□□□ -0.68
NUP43-206ENST00000543637 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.82□□□□□ -0.68
NUP43-206ENST00000543637 NOS1P29475 1434 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 UNC13BO14795 1591 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 SYNMO15061 1565 aa10.82□□□□□ -0.68
NUP43-206ENST00000543637 STRCP1A6NGW2 1772 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms