RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 PTPN23Q9H3S7 1636 aa28.32■■■□□ 2.12
FAM60A-208ENST00000543615 SHANK2Q9UPX8 1470 aa28.31■■■□□ 2.12
FAM60A-208ENST00000543615 PTPRKQ15262 1439 aa28.3■■■□□ 2.12
FAM60A-208ENST00000543615 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
FAM60A-208ENST00000543615 PTPRTO14522 1441 aa28.27■■■□□ 2.12
FAM60A-208ENST00000543615 DNMT1P26358 1616 aaKnown RBP28.26■■■□□ 2.11
FAM60A-208ENST00000543615 FBXO41Q8TF61 875 aa28.26■■■□□ 2.11
FAM60A-208ENST00000543615 KIF3BO15066 747 aa28.25■■■□□ 2.11
FAM60A-208ENST00000543615 TCOF1Q13428 1488 aaKnown RBP28.25■■■□□ 2.11
FAM60A-208ENST00000543615 NCOA1Q15788 1441 aa28.25■■■□□ 2.11
FAM60A-208ENST00000543615 DUOX2Q9NRD8 1548 aa28.24■■■□□ 2.11
FAM60A-208ENST00000543615 PZPP20742 1482 aa28.24■■■□□ 2.11
FAM60A-208ENST00000543615 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
FAM60A-208ENST00000543615 CAMSAP1Q5T5Y3 1602 aa28.23■■■□□ 2.11
FAM60A-208ENST00000543615 FGD6Q6ZV73 1430 aa28.22■■■□□ 2.11
FAM60A-208ENST00000543615 A2ML1A8K2U0 1454 aa28.17■■■□□ 2.1
FAM60A-208ENST00000543615 MROH1Q8NDA8 1641 aa28.16■■■□□ 2.1
FAM60A-208ENST00000543615 DAPK1P53355 1430 aa28.15■■■□□ 2.1
FAM60A-208ENST00000543615 ERBINQ96RT1 1412 aa28.15■■■□□ 2.1
FAM60A-208ENST00000543615 WASHC2CQ9Y4E1 1318 aa28.15■■■□□ 2.1
FAM60A-208ENST00000543615 POLR1AO95602 1720 aaPredicted RBP28.15■■■□□ 2.1
FAM60A-208ENST00000543615 ABCC5O15440 1437 aa28.14■■■□□ 2.1
FAM60A-208ENST00000543615 ABCC3O15438 1527 aa28.13■■■□□ 2.09
FAM60A-208ENST00000543615 CEP152O94986 1710 aa28.13■■■□□ 2.09
FAM60A-208ENST00000543615 DEPDC5O75140 1603 aa28.13■■■□□ 2.09
FAM60A-208ENST00000543615 PRDM15P57071 1507 aaPredicted RBP28.13■■■□□ 2.09
FAM60A-208ENST00000543615 TNRQ92752 1358 aa28.11■■■□□ 2.09
FAM60A-208ENST00000543615 NLRP1Q9C000 1473 aa28.1■■■□□ 2.09
FAM60A-208ENST00000543615 PKD2Q13563 968 aa28.1■■■□□ 2.09
FAM60A-208ENST00000543615 KIF15Q9NS87 1388 aa28.1■■■□□ 2.09
FAM60A-208ENST00000543615 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
FAM60A-208ENST00000543615 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
FAM60A-208ENST00000543615 IQSEC2Q5JU85 1478 aa28.07■■■□□ 2.08
FAM60A-208ENST00000543615 ADGRL2O95490 1459 aa28.04■■■□□ 2.08
FAM60A-208ENST00000543615 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
FAM60A-208ENST00000543615 CFAP65Q6ZU64 1925 aaKnown RBP28.02■■■□□ 2.08
FAM60A-208ENST00000543615 LTBP4Q8N2S1 1624 aa28.02■■■□□ 2.08
FAM60A-208ENST00000543615 ARHGAP31Q2M1Z3 1444 aa28■■■□□ 2.07
FAM60A-208ENST00000543615 UGGT1Q9NYU2 1555 aa27.99■■■□□ 2.07
FAM60A-208ENST00000543615 ERVK-7P63135 1459 aa27.99■■■□□ 2.07
FAM60A-208ENST00000543615 FBXO31Q5XUX0 539 aaPredicted RBP27.96■■■□□ 2.07
FAM60A-208ENST00000543615 LMTK2Q8IWU2 1503 aa27.95■■■□□ 2.06
FAM60A-208ENST00000543615 KANK1Q14678 1352 aa27.95■■■□□ 2.06
FAM60A-208ENST00000543615 VWDEQ8N2E2 1590 aa27.94■■■□□ 2.06
FAM60A-208ENST00000543615 NEURL4Q96JN8 1562 aa27.94■■■□□ 2.06
FAM60A-208ENST00000543615 KDM5AP29375 1690 aaKnown RBP27.92■■■□□ 2.06
FAM60A-208ENST00000543615 THEMISQ8N1K5 641 aaPredicted RBP27.92■■■□□ 2.06
FAM60A-208ENST00000543615 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
FAM60A-208ENST00000543615 UBR1Q8IWV7 1749 aa27.92■■■□□ 2.06
FAM60A-208ENST00000543615 NCKAP5LQ9HCH0 1330 aa27.92■■■□□ 2.06
FAM60A-208ENST00000543615 MED14O60244 1454 aa27.88■■■□□ 2.05
FAM60A-208ENST00000543615 IQGAP1P46940 1657 aa27.86■■■□□ 2.05
FAM60A-208ENST00000543615 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
FAM60A-208ENST00000543615 FAM50AQ14320 339 aaKnown RBP27.84■■■□□ 2.05
FAM60A-208ENST00000543615 ANKLE2Q86XL3 938 aa27.83■■■□□ 2.05
FAM60A-208ENST00000543615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.83■■■□□ 2.05
FAM60A-208ENST00000543615 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
FAM60A-208ENST00000543615 ANKRD50Q9ULJ7 1429 aa27.82■■■□□ 2.04
FAM60A-208ENST00000543615 CPS1P31327 1500 aa27.82■■■□□ 2.04
FAM60A-208ENST00000543615 GCC2Q8IWJ2 1684 aa27.81■■■□□ 2.04
FAM60A-208ENST00000543615 UNC13BO14795 1591 aa27.81■■■□□ 2.04
FAM60A-208ENST00000543615 TET3O43151 1660 aa27.81■■■□□ 2.04
FAM60A-208ENST00000543615 ROCK1Q13464 1354 aa27.8■■■□□ 2.04
FAM60A-208ENST00000543615 RPRD2Q5VT52 1461 aaKnown RBP27.79■■■□□ 2.04
FAM60A-208ENST00000543615 PIK3C2BO00750 1634 aa27.78■■■□□ 2.04
FAM60A-208ENST00000543615 SLIT1O75093 1534 aa27.78■■■□□ 2.04
FAM60A-208ENST00000543615 NPHP4O75161 1426 aaPredicted RBP27.77■■■□□ 2.04
FAM60A-208ENST00000543615 ZNF335Q9H4Z2 1342 aaPredicted RBP27.77■■■□□ 2.04
FAM60A-208ENST00000543615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.75■■■□□ 2.03
FAM60A-208ENST00000543615 ARHGAP23Q9P227 1491 aa27.75■■■□□ 2.03
FAM60A-208ENST00000543615 SCAF11Q99590 1463 aaKnown RBP27.71■■■□□ 2.03
FAM60A-208ENST00000543615 SYNMO15061 1565 aa27.71■■■□□ 2.03
FAM60A-208ENST00000543615 NOS1P29475 1434 aa27.71■■■□□ 2.03
FAM60A-208ENST00000543615 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.02
FAM60A-208ENST00000543615 ADGRB3O60242 1522 aa27.67■■■□□ 2.02
FAM60A-208ENST00000543615 SLC52A1Q9NWF4 448 aa27.62■■■□□ 2.01
FAM60A-208ENST00000543615 E9PCH4 1651 aa27.62■■■□□ 2.01
FAM60A-208ENST00000543615 STRCP1A6NGW2 1772 aa27.61■■■□□ 2.01
FAM60A-208ENST00000543615 RRBP1Q9P2E9 1410 aaKnown RBP27.61■■■□□ 2.01
FAM60A-208ENST00000543615 TMEM2Q9UHN6 1383 aa27.6■■■□□ 2.01
FAM60A-208ENST00000543615 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
FAM60A-208ENST00000543615 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
FAM60A-208ENST00000543615 STAG3Q9UJ98 1225 aa27.58■■■□□ 2.01
FAM60A-208ENST00000543615 IDI1Q13907 227 aa27.55■■■□□ 2
FAM60A-208ENST00000543615 TXNDC2Q86VQ3 553 aa27.55■■■□□ 2
FAM60A-208ENST00000543615 UBAP1LF5GYI3 381 aa27.53■■■□□ 2
FAM60A-208ENST00000543615 TMEM131LA2VDJ0 1609 aa27.52■■■□□ 2
FAM60A-208ENST00000543615 LTKP29376 864 aa27.5■■□□□ 1.99
FAM60A-208ENST00000543615 SPHKAPQ2M3C7 1700 aa27.5■■□□□ 1.99
FAM60A-208ENST00000543615 TOM1O60784 492 aa27.49■■□□□ 1.99
FAM60A-208ENST00000543615 LRRC7Q96NW7 1537 aa27.48■■□□□ 1.99
FAM60A-208ENST00000543615 XIRP1Q702N8 1843 aaKnown RBP27.46■■□□□ 1.99
FAM60A-208ENST00000543615 NUP155O75694 1391 aa27.45■■□□□ 1.98
FAM60A-208ENST00000543615 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
FAM60A-208ENST00000543615 ITGAEP38570 1179 aa27.43■■□□□ 1.98
FAM60A-208ENST00000543615 NWD1Q149M9 1564 aa27.43■■□□□ 1.98
FAM60A-208ENST00000543615 ZFYVE9O95405 1425 aa27.42■■□□□ 1.98
FAM60A-208ENST00000543615 PPARGC1BQ86YN6 1023 aaKnown RBP27.42■■□□□ 1.98
FAM60A-208ENST00000543615 CHD2O14647 1828 aaKnown RBP27.39■■□□□ 1.98
FAM60A-208ENST00000543615 DIP2AQ14689 1571 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms