RNA–Protein interactions for RNA: ENST00000543507.1

KDM5A-209, Transcript of lysine demethylase 5A, humanhuman

TSL 4

Gene KDM5A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-209ENST00000543507 FGD6Q6ZV73 1430 aa33.19■■■□□ 2.9
KDM5A-209ENST00000543507 SHANK2Q9UPX8 1470 aa33.18■■■□□ 2.9
KDM5A-209ENST00000543507 EIF2AK4Q9P2K8 1649 aaKnown RBP33.16■■■□□ 2.9
KDM5A-209ENST00000543507 NCOA1Q15788 1441 aa33.15■■■□□ 2.9
KDM5A-209ENST00000543507 MYO3AQ8NEV4 1616 aa33.14■■■□□ 2.9
KDM5A-209ENST00000543507 DUOX2Q9NRD8 1548 aa33.14■■■□□ 2.9
KDM5A-209ENST00000543507 TCOF1Q13428 1488 aaKnown RBP33.14■■■□□ 2.9
KDM5A-209ENST00000543507 PZPP20742 1482 aa33.13■■■□□ 2.89
KDM5A-209ENST00000543507 ZNF142P52746 1687 aaPredicted RBP33.13■■■□□ 2.89
KDM5A-209ENST00000543507 ABCC5O15440 1437 aa33.12■■■□□ 2.89
KDM5A-209ENST00000543507 CERKQ8TCT0 537 aa33.12■■■□□ 2.89
KDM5A-209ENST00000543507 CAMSAP1Q5T5Y3 1602 aa33.12■■■□□ 2.89
KDM5A-209ENST00000543507 RNF17Q9BXT8 1623 aaKnown RBP33.11■■■□□ 2.89
KDM5A-209ENST00000543507 CEP170BQ9Y4F5 1589 aaPredicted RBP33.11■■■□□ 2.89
KDM5A-209ENST00000543507 DAPK1P53355 1430 aa33.1■■■□□ 2.89
KDM5A-209ENST00000543507 PKD2Q13563 968 aa33.09■■■□□ 2.89
KDM5A-209ENST00000543507 TNRQ92752 1358 aa33.09■■■□□ 2.89
KDM5A-209ENST00000543507 KIF15Q9NS87 1388 aa33.09■■■□□ 2.89
KDM5A-209ENST00000543507 CROCC2H7BZ55 1655 aa33.08■■■□□ 2.89
KDM5A-209ENST00000543507 PLA2R1Q13018 1463 aa33.08■■■□□ 2.89
KDM5A-209ENST00000543507 DNMT1P26358 1616 aaKnown RBP33.08■■■□□ 2.89
KDM5A-209ENST00000543507 ZC3H13Q5T200 1668 aaKnown RBP33.07■■■□□ 2.88
KDM5A-209ENST00000543507 A2ML1A8K2U0 1454 aa33.06■■■□□ 2.88
KDM5A-209ENST00000543507 ERBINQ96RT1 1412 aa33.05■■■□□ 2.88
KDM5A-209ENST00000543507 FBXO31Q5XUX0 539 aaPredicted RBP33.04■■■□□ 2.88
KDM5A-209ENST00000543507 RRP7BPQ9NSQ0 103 aa33.04■■■□□ 2.88
KDM5A-209ENST00000543507 ANKRD30AQ9BXX3 1397 aa33.04■■■□□ 2.88
KDM5A-209ENST00000543507 ABCC3O15438 1527 aa33■■■□□ 2.87
KDM5A-209ENST00000543507 NLRP1Q9C000 1473 aa32.98■■■□□ 2.87
KDM5A-209ENST00000543507 NCKAP5LQ9HCH0 1330 aa32.98■■■□□ 2.87
KDM5A-209ENST00000543507 FAM50AQ14320 339 aaKnown RBP32.97■■■□□ 2.87
KDM5A-209ENST00000543507 THEMISQ8N1K5 641 aaPredicted RBP32.95■■■□□ 2.87
KDM5A-209ENST00000543507 CHIC2Q9UKJ5 165 aa32.95■■■□□ 2.87
KDM5A-209ENST00000543507 KANK1Q14678 1352 aa32.94■■■□□ 2.86
KDM5A-209ENST00000543507 MROH1Q8NDA8 1641 aa32.93■■■□□ 2.86
KDM5A-209ENST00000543507 PRDM15P57071 1507 aaPredicted RBP32.9■■■□□ 2.86
KDM5A-209ENST00000543507 SPATA31D1Q6ZQQ2 1576 aa32.88■■■□□ 2.85
KDM5A-209ENST00000543507 ADGRL2O95490 1459 aa32.87■■■□□ 2.85
KDM5A-209ENST00000543507 UGGT1Q9NYU2 1555 aa32.87■■■□□ 2.85
KDM5A-209ENST00000543507 ANKLE2Q86XL3 938 aa32.86■■■□□ 2.85
KDM5A-209ENST00000543507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.86■■■□□ 2.851e-7■■■■□ 21.7
KDM5A-209ENST00000543507 ERVK-7P63135 1459 aa32.86■■■□□ 2.85
KDM5A-209ENST00000543507 ARHGAP31Q2M1Z3 1444 aa32.85■■■□□ 2.85
KDM5A-209ENST00000543507 CEP152O94986 1710 aa32.85■■■□□ 2.85
KDM5A-209ENST00000543507 DEPDC5O75140 1603 aa32.83■■■□□ 2.85
KDM5A-209ENST00000543507 IQSEC2Q5JU85 1478 aa32.82■■■□□ 2.84
KDM5A-209ENST00000543507 LTBP4Q8N2S1 1624 aa32.81■■■□□ 2.84
KDM5A-209ENST00000543507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.79■■■□□ 2.84
KDM5A-209ENST00000543507 POLR1AO95602 1720 aaPredicted RBP32.77■■■□□ 2.84
KDM5A-209ENST00000543507 ANKRD50Q9ULJ7 1429 aa32.75■■■□□ 2.83
KDM5A-209ENST00000543507 LMTK2Q8IWU2 1503 aa32.74■■■□□ 2.83
KDM5A-209ENST00000543507 ZNF335Q9H4Z2 1342 aaPredicted RBP32.74■■■□□ 2.83
KDM5A-209ENST00000543507 VWDEQ8N2E2 1590 aa32.7■■■□□ 2.83
KDM5A-209ENST00000543507 ROCK1Q13464 1354 aa32.69■■■□□ 2.82
KDM5A-209ENST00000543507 CFAP65Q6ZU64 1925 aaKnown RBP32.69■■■□□ 2.82
KDM5A-209ENST00000543507 MED14O60244 1454 aa32.68■■■□□ 2.82
KDM5A-209ENST00000543507 NEURL4Q96JN8 1562 aa32.68■■■□□ 2.82
KDM5A-209ENST00000543507 NPHP4O75161 1426 aaPredicted RBP32.66■■■□□ 2.82
KDM5A-209ENST00000543507 STAG3Q9UJ98 1225 aa32.63■■■□□ 2.81
KDM5A-209ENST00000543507 UBR1Q8IWV7 1749 aa32.62■■■□□ 2.81
KDM5A-209ENST00000543507 PPARGC1BQ86YN6 1023 aaKnown RBP32.61■■■□□ 2.81
KDM5A-209ENST00000543507 EFCAB6Q5THR3 1501 aa32.61■■■□□ 2.81
KDM5A-209ENST00000543507 EID1Q9Y6B2 187 aa32.6■■■□□ 2.81
KDM5A-209ENST00000543507 CPS1P31327 1500 aa32.59■■■□□ 2.81
KDM5A-209ENST00000543507 RPRD2Q5VT52 1461 aaKnown RBP32.59■■■□□ 2.81
KDM5A-209ENST00000543507 SLC52A1Q9NWF4 448 aa32.57■■■□□ 2.8
KDM5A-209ENST00000543507 IQGAP1P46940 1657 aa32.56■■■□□ 2.8
KDM5A-209ENST00000543507 SLIT1O75093 1534 aa32.56■■■□□ 2.8
KDM5A-209ENST00000543507 SCAF11Q99590 1463 aaKnown RBP32.55■■■□□ 2.8
KDM5A-209ENST00000543507 ITGAEP38570 1179 aa32.55■■■□□ 2.8
KDM5A-209ENST00000543507 TXNDC2Q86VQ3 553 aa32.55■■■□□ 2.8
KDM5A-209ENST00000543507 NOS1P29475 1434 aa32.54■■■□□ 2.8
KDM5A-209ENST00000543507 KDM5AP29375 1690 aaKnown RBP32.54■■■□□ 2.8
KDM5A-209ENST00000543507 ARHGAP23Q9P227 1491 aa32.54■■■□□ 2.8
KDM5A-209ENST00000543507 IDI1Q13907 227 aa32.53■■■□□ 2.8
KDM5A-209ENST00000543507 PIK3C2BO00750 1634 aa32.52■■■□□ 2.8
KDM5A-209ENST00000543507 UNC13BO14795 1591 aa32.51■■■□□ 2.79
KDM5A-209ENST00000543507 UBAP1LF5GYI3 381 aa32.51■■■□□ 2.79
KDM5A-209ENST00000543507 TET3O43151 1660 aa32.5■■■□□ 2.79
KDM5A-209ENST00000543507 TMEM2Q9UHN6 1383 aa32.49■■■□□ 2.79
KDM5A-209ENST00000543507 SYNMO15061 1565 aa32.46■■■□□ 2.79
KDM5A-209ENST00000543507 LTKP29376 864 aa32.46■■■□□ 2.79
KDM5A-209ENST00000543507 RRBP1Q9P2E9 1410 aaKnown RBP32.45■■■□□ 2.79
KDM5A-209ENST00000543507 GCC2Q8IWJ2 1684 aa32.45■■■□□ 2.79
KDM5A-209ENST00000543507 TOM1O60784 492 aa32.42■■■□□ 2.78
KDM5A-209ENST00000543507 HDGFP51858 240 aaKnown RBP32.41■■■□□ 2.78
KDM5A-209ENST00000543507 NUP155O75694 1391 aa32.41■■■□□ 2.78
KDM5A-209ENST00000543507 ADGRB3O60242 1522 aa32.41■■■□□ 2.78
KDM5A-209ENST00000543507 IQGAP3Q86VI3 1631 aa32.39■■■□□ 2.78
KDM5A-209ENST00000543507 E9PCH4 1651 aa32.31■■■□□ 2.76
KDM5A-209ENST00000543507 LRRC7Q96NW7 1537 aa32.27■■■□□ 2.76
KDM5A-209ENST00000543507 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.27■■■□□ 2.76
KDM5A-209ENST00000543507 BCANQ96GW7 911 aa32.27■■■□□ 2.76
KDM5A-209ENST00000543507 SCAF1Q9H7N4 1312 aaKnown RBP32.26■■■□□ 2.76
KDM5A-209ENST00000543507 PPP1R15AO75807 674 aaPredicted RBP32.25■■■□□ 2.75
KDM5A-209ENST00000543507 CHGAP10645 457 aaKnown RBP32.25■■■□□ 2.75
KDM5A-209ENST00000543507 STRCP1A6NGW2 1772 aa32.23■■■□□ 2.75
KDM5A-209ENST00000543507 PIP4K2BP78356 416 aa32.23■■■□□ 2.75
KDM5A-209ENST00000543507 TMEM131LA2VDJ0 1609 aa32.22■■■□□ 2.75
KDM5A-209ENST00000543507 RIMS2Q9UQ26 1411 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms