RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
BECN1-203ENST00000543382 FAM9BQ8IZU0 186 aa22.42■■□□□ 1.18
BECN1-203ENST00000543382 NEFLP07196 543 aa22.41■■□□□ 1.18
BECN1-203ENST00000543382 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
BECN1-203ENST00000543382 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
BECN1-203ENST00000543382 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.18
BECN1-203ENST00000543382 ABCC1P33527 1531 aa22.39■■□□□ 1.17
BECN1-203ENST00000543382 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
BECN1-203ENST00000543382 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
BECN1-203ENST00000543382 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
BECN1-203ENST00000543382 CNGB1Q14028 1251 aaPredicted RBP22.37■■□□□ 1.17
BECN1-203ENST00000543382 ARID4BQ4LE39 1312 aaPredicted RBP22.37■■□□□ 1.17
BECN1-203ENST00000543382 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
BECN1-203ENST00000543382 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
BECN1-203ENST00000543382 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
BECN1-203ENST00000543382 TSHZ2Q9NRE2 1034 aa22.35■■□□□ 1.17
BECN1-203ENST00000543382 ROCK2O75116 1388 aaKnown RBP22.35■■□□□ 1.17
BECN1-203ENST00000543382 ERBINQ96RT1 1412 aa22.35■■□□□ 1.17
BECN1-203ENST00000543382 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
BECN1-203ENST00000543382 A2MP01023 1474 aa22.33■■□□□ 1.17
BECN1-203ENST00000543382 NBPF1Q3BBV0 1214 aa22.29■■□□□ 1.16
BECN1-203ENST00000543382 AFAP1Q8N556 730 aa22.29■■□□□ 1.16
BECN1-203ENST00000543382 ZBED9Q6R2W3 1325 aa22.27■■□□□ 1.16
BECN1-203ENST00000543382 ATP10AO60312 1499 aa22.27■■□□□ 1.15
BECN1-203ENST00000543382 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
BECN1-203ENST00000543382 SPAG9O60271 1321 aaKnown RBP22.25■■□□□ 1.15
BECN1-203ENST00000543382 ZFYVE16Q7Z3T8 1539 aa22.25■■□□□ 1.15
BECN1-203ENST00000543382 ARAP3Q8WWN8 1544 aa22.25■■□□□ 1.15
BECN1-203ENST00000543382 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
BECN1-203ENST00000543382 E9PCH4 1651 aa22.24■■□□□ 1.15
BECN1-203ENST00000543382 GPRASP1Q5JY77 1395 aa22.23■■□□□ 1.15
BECN1-203ENST00000543382 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
BECN1-203ENST00000543382 ABCA9Q8IUA7 1624 aa22.19■■□□□ 1.14
BECN1-203ENST00000543382 PRDM15P57071 1507 aaPredicted RBP22.19■■□□□ 1.14
BECN1-203ENST00000543382 FANCAO15360 1455 aa22.18■■□□□ 1.14
BECN1-203ENST00000543382 LAMC1P11047 1609 aa22.17■■□□□ 1.14
BECN1-203ENST00000543382 EIF2AK4Q9P2K8 1649 aaKnown RBP22.16■■□□□ 1.14
BECN1-203ENST00000543382 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
BECN1-203ENST00000543382 INO80Q9ULG1 1556 aaPredicted RBP22.15■■□□□ 1.14
BECN1-203ENST00000543382 DEPDC5O75140 1603 aa22.14■■□□□ 1.14
BECN1-203ENST00000543382 ATP7AQ04656 1500 aa22.14■■□□□ 1.14
BECN1-203ENST00000543382 TESK2Q96S53 571 aa22.14■■□□□ 1.14
BECN1-203ENST00000543382 DISP3Q9P2K9 1392 aa22.13■■□□□ 1.13
BECN1-203ENST00000543382 COL17A1Q9UMD9 1497 aaPredicted RBP22.13■■□□□ 1.13
BECN1-203ENST00000543382 SENP3-EIF4A1A0A087X0R7 540 aa22.12■■□□□ 1.13
BECN1-203ENST00000543382 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
BECN1-203ENST00000543382 TMC1Q8TDI8 760 aa22.12■■□□□ 1.13
BECN1-203ENST00000543382 TRPM2O94759 1503 aa22.11■■□□□ 1.13
BECN1-203ENST00000543382 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
BECN1-203ENST00000543382 RNF17Q9BXT8 1623 aaKnown RBP22.11■■□□□ 1.13
BECN1-203ENST00000543382 SPHKAPQ2M3C7 1700 aa22.1■■□□□ 1.13
BECN1-203ENST00000543382 SCAPERQ9BY12 1400 aa22.1■■□□□ 1.13
BECN1-203ENST00000543382 MYBBP1AQ9BQG0 1328 aaKnown RBP22.09■■□□□ 1.13
BECN1-203ENST00000543382 PTPRTO14522 1441 aa22.09■■□□□ 1.13
BECN1-203ENST00000543382 CLTCL1P53675 1640 aa22.08■■□□□ 1.13
BECN1-203ENST00000543382 RALBP1Q15311 655 aa22.08■■□□□ 1.13
BECN1-203ENST00000543382 MADDQ8WXG6 1647 aa22.08■■□□□ 1.13
BECN1-203ENST00000543382 TET3O43151 1660 aa22.07■■□□□ 1.12
BECN1-203ENST00000543382 CEP152O94986 1710 aa22.07■■□□□ 1.12
BECN1-203ENST00000543382 PER1O15534 1290 aaPredicted RBP22.07■■□□□ 1.12
BECN1-203ENST00000543382 VWDEQ8N2E2 1590 aa22.07■■□□□ 1.12
BECN1-203ENST00000543382 BRD4O60885 1362 aaPredicted RBP22.06■■□□□ 1.12
BECN1-203ENST00000543382 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
BECN1-203ENST00000543382 KIF3BO15066 747 aa22.06■■□□□ 1.12
BECN1-203ENST00000543382 MYT1LQ9UL68 1186 aa22.06■■□□□ 1.12
BECN1-203ENST00000543382 LRPPRCP42704 1394 aaKnown RBP22.05■■□□□ 1.12
BECN1-203ENST00000543382 SMG6Q86US8 1419 aaKnown RBP22.05■■□□□ 1.12
BECN1-203ENST00000543382 PARD3Q8TEW0 1356 aa22.04■■□□□ 1.12
BECN1-203ENST00000543382 MROH1Q8NDA8 1641 aa22.04■■□□□ 1.12
BECN1-203ENST00000543382 ERICH6BQ5W0A0 696 aa22.02■■□□□ 1.12
BECN1-203ENST00000543382 KANK1Q14678 1352 aa22.01■■□□□ 1.11
BECN1-203ENST00000543382 KIDINS220Q9ULH0 1771 aa22■■□□□ 1.11
BECN1-203ENST00000543382 IQGAP1P46940 1657 aa22■■□□□ 1.11
BECN1-203ENST00000543382 TMF1P82094 1093 aa22■■□□□ 1.11
BECN1-203ENST00000543382 NUDCQ9Y266 331 aa22■■□□□ 1.11
BECN1-203ENST00000543382 PANK3Q9H999 370 aa22■■□□□ 1.11
BECN1-203ENST00000543382 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
BECN1-203ENST00000543382 UGGT1Q9NYU2 1555 aa21.98■■□□□ 1.11
BECN1-203ENST00000543382 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
BECN1-203ENST00000543382 CC2D1BQ5T0F9 858 aaKnown RBP21.97■■□□□ 1.11
BECN1-203ENST00000543382 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
BECN1-203ENST00000543382 RBM19Q9Y4C8 960 aaKnown RBP21.96■■□□□ 1.11
BECN1-203ENST00000543382 MYT1Q01538 1121 aa21.94■■□□□ 1.1
BECN1-203ENST00000543382 ZNF518AQ6AHZ1 1483 aa21.92■■□□□ 1.1
BECN1-203ENST00000543382 SCAF11Q99590 1463 aaKnown RBP21.92■■□□□ 1.1
BECN1-203ENST00000543382 B4GALNT3Q6L9W6 998 aa21.92■■□□□ 1.1
BECN1-203ENST00000543382 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
BECN1-203ENST00000543382 EFCAB6Q5THR3 1501 aa21.91■■□□□ 1.1
BECN1-203ENST00000543382 NPM1P06748 294 aaKnown RBP eCLIP21.91■■□□□ 1.1
BECN1-203ENST00000543382 PPRC1Q5VV67 1664 aaKnown RBP21.91■■□□□ 1.1
BECN1-203ENST00000543382 RNF123Q5XPI4 1314 aa21.9■■□□□ 1.1
BECN1-203ENST00000543382 STAC3Q96MF2 364 aa21.89■■□□□ 1.1
BECN1-203ENST00000543382 CD109Q6YHK3 1445 aa21.89■■□□□ 1.09
BECN1-203ENST00000543382 NEURL4Q96JN8 1562 aa21.88■■□□□ 1.09
BECN1-203ENST00000543382 MROH2AA6NES4 1674 aa21.87■■□□□ 1.09
BECN1-203ENST00000543382 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
BECN1-203ENST00000543382 KIF1BO60333 1816 aa21.86■■□□□ 1.09
BECN1-203ENST00000543382 ADGRF5Q8IZF2 1346 aa21.86■■□□□ 1.09
BECN1-203ENST00000543382 POGZQ7Z3K3 1410 aa21.86■■□□□ 1.09
BECN1-203ENST00000543382 MAP3K4Q9Y6R4 1608 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms