RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 ZFYVE16Q7Z3T8 1539 aa28.66■■■□□ 2.18
ME3-212ENST00000543262 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
ME3-212ENST00000543262 KDM2AQ9Y2K7 1162 aa28.66■■■□□ 2.18
ME3-212ENST00000543262 DCAF11Q8TEB1 546 aa28.65■■■□□ 2.18
ME3-212ENST00000543262 RALGAPBQ86X10 1494 aa28.65■■■□□ 2.18
ME3-212ENST00000543262 USP47Q96K76 1375 aa28.65■■■□□ 2.18
ME3-212ENST00000543262 KIF7Q2M1P5 1343 aa28.64■■■□□ 2.18
ME3-212ENST00000543262 NPM1P06748 294 aaKnown RBP eCLIP28.63■■■□□ 2.17
ME3-212ENST00000543262 KDM5CP41229 1560 aa28.62■■■□□ 2.17
ME3-212ENST00000543262 ADGRL1O94910 1474 aa28.59■■■□□ 2.17
ME3-212ENST00000543262 SCAPERQ9BY12 1400 aa28.58■■■□□ 2.17
ME3-212ENST00000543262 BCORL1Q5H9F3 1711 aa28.58■■■□□ 2.17
ME3-212ENST00000543262 INO80Q9ULG1 1556 aaPredicted RBP28.58■■■□□ 2.17
ME3-212ENST00000543262 ATP7AQ04656 1500 aa28.57■■■□□ 2.16
ME3-212ENST00000543262 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
ME3-212ENST00000543262 ATP10AO60312 1499 aa28.56■■■□□ 2.16
ME3-212ENST00000543262 RGL3Q3MIN7 710 aa28.54■■■□□ 2.16
ME3-212ENST00000543262 DEPDC5O75140 1603 aa28.5■■■□□ 2.15
ME3-212ENST00000543262 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
ME3-212ENST00000543262 PRAG1Q86YV5 1406 aa28.49■■■□□ 2.15
ME3-212ENST00000543262 E9PCH4 1651 aa28.49■■■□□ 2.15
ME3-212ENST00000543262 A2MP01023 1474 aa28.49■■■□□ 2.15
ME3-212ENST00000543262 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
ME3-212ENST00000543262 ROCK2O75116 1388 aaKnown RBP28.46■■■□□ 2.15
ME3-212ENST00000543262 PRKRIP1Q9H875 184 aaPredicted RBP28.46■■■□□ 2.15
ME3-212ENST00000543262 ARID4BQ4LE39 1312 aaPredicted RBP28.45■■■□□ 2.14
ME3-212ENST00000543262 CD109Q6YHK3 1445 aa28.44■■■□□ 2.14
ME3-212ENST00000543262 DHX29Q7Z478 1369 aaKnown RBP28.43■■■□□ 2.14
ME3-212ENST00000543262 ST20-MTHFSA0A0A6YYL1 179 aa28.42■■■□□ 2.14
ME3-212ENST00000543262 POLR3GLQ9BT43 218 aa28.42■■■□□ 2.14
ME3-212ENST00000543262 KIDINS220Q9ULH0 1771 aa28.42■■■□□ 2.14
ME3-212ENST00000543262 KIF3BO15066 747 aa28.41■■■□□ 2.14
ME3-212ENST00000543262 EIF2AK4Q9P2K8 1649 aaKnown RBP28.41■■■□□ 2.14
ME3-212ENST00000543262 TET3O43151 1660 aa28.4■■■□□ 2.14
ME3-212ENST00000543262 ZNF518AQ6AHZ1 1483 aa28.39■■■□□ 2.14
ME3-212ENST00000543262 KANK1Q14678 1352 aa28.39■■■□□ 2.14
ME3-212ENST00000543262 VWDEQ8N2E2 1590 aa28.39■■■□□ 2.14
ME3-212ENST00000543262 CFAP74Q9C0B2 1584 aa28.39■■■□□ 2.13
ME3-212ENST00000543262 NBPF1Q3BBV0 1214 aa28.37■■■□□ 2.13
ME3-212ENST00000543262 SPHKAPQ2M3C7 1700 aa28.37■■■□□ 2.13
ME3-212ENST00000543262 TRPM2O94759 1503 aa28.37■■■□□ 2.13
ME3-212ENST00000543262 CCDC184Q52MB2 194 aa28.36■■■□□ 2.13
ME3-212ENST00000543262 PTPRTO14522 1441 aa28.35■■■□□ 2.13
ME3-212ENST00000543262 MROH1Q8NDA8 1641 aa28.34■■■□□ 2.13
ME3-212ENST00000543262 PRDM15P57071 1507 aaPredicted RBP28.34■■■□□ 2.13
ME3-212ENST00000543262 GPRASP1Q5JY77 1395 aa28.33■■■□□ 2.13
ME3-212ENST00000543262 CEP152O94986 1710 aa28.32■■■□□ 2.12
ME3-212ENST00000543262 LAMC1P11047 1609 aa28.31■■■□□ 2.12
ME3-212ENST00000543262 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
ME3-212ENST00000543262 CLTCL1P53675 1640 aa28.3■■■□□ 2.12
ME3-212ENST00000543262 SUPT16HQ9Y5B9 1047 aaKnown RBP28.29■■■□□ 2.12
ME3-212ENST00000543262 HNRNPUQ00839 825 aaKnown RBP eCLIP28.27■■■□□ 2.12
ME3-212ENST00000543262 MRS2Q9HD23 443 aa28.26■■■□□ 2.12
ME3-212ENST00000543262 MLH3Q9UHC1 1453 aa28.25■■■□□ 2.11
ME3-212ENST00000543262 HECW2Q9P2P5 1572 aa28.23■■■□□ 2.11
ME3-212ENST00000543262 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
ME3-212ENST00000543262 NEO1Q92859 1461 aa28.21■■■□□ 2.11
ME3-212ENST00000543262 RNF17Q9BXT8 1623 aaKnown RBP28.2■■■□□ 2.11
ME3-212ENST00000543262 EFCAB6Q5THR3 1501 aa28.2■■■□□ 2.11
ME3-212ENST00000543262 CNGB1Q14028 1251 aaPredicted RBP28.2■■■□□ 2.1
ME3-212ENST00000543262 CYB5RLQ6IPT4 315 aa28.2■■■□□ 2.1
ME3-212ENST00000543262 FAM9BQ8IZU0 186 aa28.19■■■□□ 2.1
ME3-212ENST00000543262 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
ME3-212ENST00000543262 PPRC1Q5VV67 1664 aaKnown RBP28.18■■■□□ 2.1
ME3-212ENST00000543262 STAC3Q96MF2 364 aa28.17■■■□□ 2.1
ME3-212ENST00000543262 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
ME3-212ENST00000543262 TESK2Q96S53 571 aa28.16■■■□□ 2.1
ME3-212ENST00000543262 RAPGEF3O95398 923 aa28.15■■■□□ 2.1
ME3-212ENST00000543262 ABCA6Q8N139 1617 aa28.15■■■□□ 2.1
ME3-212ENST00000543262 UGGT1Q9NYU2 1555 aa28.14■■■□□ 2.1
ME3-212ENST00000543262 MAP3K4Q9Y6R4 1608 aa28.13■■■□□ 2.09
ME3-212ENST00000543262 NEURL4Q96JN8 1562 aa28.13■■■□□ 2.09
ME3-212ENST00000543262 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
ME3-212ENST00000543262 RIMBP3CA6NJZ7 1639 aa28.11■■■□□ 2.09
ME3-212ENST00000543262 RIMBP3BA6NNM3 1639 aa28.11■■■□□ 2.09
ME3-212ENST00000543262 RIMBP3Q9UFD9 1639 aa28.11■■■□□ 2.09
ME3-212ENST00000543262 KIF1BO60333 1816 aa28.11■■■□□ 2.09
ME3-212ENST00000543262 DISP3Q9P2K9 1392 aa28.1■■■□□ 2.09
ME3-212ENST00000543262 GGT6Q6P531 493 aa28.1■■■□□ 2.09
ME3-212ENST00000543262 IQGAP1P46940 1657 aa28.08■■■□□ 2.09
ME3-212ENST00000543262 RICTORQ6R327 1708 aa28.06■■■□□ 2.08
ME3-212ENST00000543262 FKBP8Q14318 412 aa28.06■■■□□ 2.08
ME3-212ENST00000543262 TMF1P82094 1093 aa28.05■■■□□ 2.08
ME3-212ENST00000543262 GLI2P10070 1586 aa28.05■■■□□ 2.08
ME3-212ENST00000543262 CFAP65Q6ZU64 1925 aaKnown RBP28.04■■■□□ 2.08
ME3-212ENST00000543262 DIP2CQ9Y2E4 1556 aa28.03■■■□□ 2.08
ME3-212ENST00000543262 MROH2AA6NES4 1674 aa28.02■■■□□ 2.08
ME3-212ENST00000543262 NPATQ14207 1427 aa28.02■■■□□ 2.08
ME3-212ENST00000543262 KIAA1210Q9ULL0 1709 aa28.02■■■□□ 2.08
ME3-212ENST00000543262 KTN1Q86UP2 1357 aaKnown RBP28.02■■■□□ 2.08
ME3-212ENST00000543262 WASHC2CQ9Y4E1 1318 aa28.01■■■□□ 2.07
ME3-212ENST00000543262 IFT172Q9UG01 1749 aa28■■■□□ 2.07
ME3-212ENST00000543262 SCAF11Q99590 1463 aaKnown RBP28■■■□□ 2.07
ME3-212ENST00000543262 RALBP1Q15311 655 aa28■■■□□ 2.07
ME3-212ENST00000543262 MYOM2P54296 1465 aa28■■■□□ 2.07
ME3-212ENST00000543262 ABCC3O15438 1527 aa28■■■□□ 2.07
ME3-212ENST00000543262 NEFLP07196 543 aa28■■■□□ 2.07
ME3-212ENST00000543262 PER1O15534 1290 aaPredicted RBP27.99■■■□□ 2.07
ME3-212ENST00000543262 ZBED9Q6R2W3 1325 aa27.98■■■□□ 2.07
ME3-212ENST00000543262 MYT1Q01538 1121 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms