RNA–Protein interactions for RNA: ENST00000543259.1

C12orf56-206, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 4

Gene C12orf56, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-206ENST00000543259 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
C12orf56-206ENST00000543259 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
C12orf56-206ENST00000543259 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
C12orf56-206ENST00000543259 MIA2Q96PC5 1412 aa18.68■□□□□ 0.58
C12orf56-206ENST00000543259 TCOF1Q13428 1488 aaKnown RBP18.67■□□□□ 0.58
C12orf56-206ENST00000543259 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
C12orf56-206ENST00000543259 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.58
C12orf56-206ENST00000543259 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
C12orf56-206ENST00000543259 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
C12orf56-206ENST00000543259 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
C12orf56-206ENST00000543259 SPATA31D1Q6ZQQ2 1576 aa18.62■□□□□ 0.57
C12orf56-206ENST00000543259 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
C12orf56-206ENST00000543259 MAST1Q9Y2H9 1570 aa18.61■□□□□ 0.57
C12orf56-206ENST00000543259 KANK4Q5T7N3 995 aaPredicted RBP18.61■□□□□ 0.57
C12orf56-206ENST00000543259 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
C12orf56-206ENST00000543259 A2ML1A8K2U0 1454 aa18.6■□□□□ 0.57
C12orf56-206ENST00000543259 KDM5DQ9BY66 1539 aa18.59■□□□□ 0.57
C12orf56-206ENST00000543259 GGT6Q6P531 493 aa18.59■□□□□ 0.57
C12orf56-206ENST00000543259 NCKAP5LQ9HCH0 1330 aa18.58■□□□□ 0.57
C12orf56-206ENST00000543259 NEURL4Q96JN8 1562 aa18.58■□□□□ 0.56
C12orf56-206ENST00000543259 PZPP20742 1482 aa18.57■□□□□ 0.56
C12orf56-206ENST00000543259 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
C12orf56-206ENST00000543259 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
C12orf56-206ENST00000543259 PKD2Q13563 968 aa18.55■□□□□ 0.56
C12orf56-206ENST00000543259 SHANK2Q9UPX8 1470 aa18.54■□□□□ 0.56
C12orf56-206ENST00000543259 RNF17Q9BXT8 1623 aaKnown RBP18.54■□□□□ 0.56
C12orf56-206ENST00000543259 PTPN23Q9H3S7 1636 aa18.53■□□□□ 0.56
C12orf56-206ENST00000543259 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
C12orf56-206ENST00000543259 KIF3BO15066 747 aa18.53■□□□□ 0.56
C12orf56-206ENST00000543259 ILDR2Q71H61 639 aa18.52■□□□□ 0.56
C12orf56-206ENST00000543259 CROCC2H7BZ55 1655 aa18.51■□□□□ 0.55
C12orf56-206ENST00000543259 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
C12orf56-206ENST00000543259 TNRQ92752 1358 aa18.51■□□□□ 0.55
C12orf56-206ENST00000543259 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
C12orf56-206ENST00000543259 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
C12orf56-206ENST00000543259 MROH1Q8NDA8 1641 aa18.48■□□□□ 0.55
C12orf56-206ENST00000543259 DEPDC5O75140 1603 aa18.47■□□□□ 0.55
C12orf56-206ENST00000543259 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
C12orf56-206ENST00000543259 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
C12orf56-206ENST00000543259 ABCC3O15438 1527 aa18.46■□□□□ 0.55
C12orf56-206ENST00000543259 FBXO31Q5XUX0 539 aaPredicted RBP18.46■□□□□ 0.55
C12orf56-206ENST00000543259 VWDEQ8N2E2 1590 aa18.46■□□□□ 0.55
C12orf56-206ENST00000543259 CPS1P31327 1500 aa18.45■□□□□ 0.54
C12orf56-206ENST00000543259 DAPK1P53355 1430 aa18.45■□□□□ 0.54
C12orf56-206ENST00000543259 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
C12orf56-206ENST00000543259 ABCC5O15440 1437 aa18.44■□□□□ 0.54
C12orf56-206ENST00000543259 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
C12orf56-206ENST00000543259 UGGT1Q9NYU2 1555 aa18.43■□□□□ 0.54
C12orf56-206ENST00000543259 MED14O60244 1454 aa18.42■□□□□ 0.54
C12orf56-206ENST00000543259 CEP152O94986 1710 aa18.42■□□□□ 0.54
C12orf56-206ENST00000543259 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
C12orf56-206ENST00000543259 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
C12orf56-206ENST00000543259 ANKRD30AQ9BXX3 1397 aa18.41■□□□□ 0.54
C12orf56-206ENST00000543259 SOCS7O14512 581 aa18.4■□□□□ 0.54
C12orf56-206ENST00000543259 ALKQ9UM73 1620 aa18.4■□□□□ 0.54
C12orf56-206ENST00000543259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.4■□□□□ 0.54
C12orf56-206ENST00000543259 ERVK-7P63135 1459 aa18.39■□□□□ 0.54
C12orf56-206ENST00000543259 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.54
C12orf56-206ENST00000543259 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
C12orf56-206ENST00000543259 NPHP4O75161 1426 aaPredicted RBP18.37■□□□□ 0.53
C12orf56-206ENST00000543259 UBR1Q8IWV7 1749 aa18.37■□□□□ 0.53
C12orf56-206ENST00000543259 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
C12orf56-206ENST00000543259 KANK1Q14678 1352 aa18.35■□□□□ 0.53
C12orf56-206ENST00000543259 SYNMO15061 1565 aa18.34■□□□□ 0.53
C12orf56-206ENST00000543259 RRP7BPQ9NSQ0 103 aa18.34■□□□□ 0.53
C12orf56-206ENST00000543259 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
C12orf56-206ENST00000543259 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.52
C12orf56-206ENST00000543259 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
C12orf56-206ENST00000543259 THEMISQ8N1K5 641 aaPredicted RBP18.32■□□□□ 0.52
C12orf56-206ENST00000543259 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
C12orf56-206ENST00000543259 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
C12orf56-206ENST00000543259 ARHGAP23Q9P227 1491 aa18.28■□□□□ 0.52
C12orf56-206ENST00000543259 CHIC2Q9UKJ5 165 aa18.28■□□□□ 0.52
C12orf56-206ENST00000543259 SLIT1O75093 1534 aa18.28■□□□□ 0.52
C12orf56-206ENST00000543259 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
C12orf56-206ENST00000543259 LMTK2Q8IWU2 1503 aa18.27■□□□□ 0.51
C12orf56-206ENST00000543259 SCAF11Q99590 1463 aaKnown RBP18.26■□□□□ 0.51
C12orf56-206ENST00000543259 HSPA1LP34931 641 aa18.26■□□□□ 0.51
C12orf56-206ENST00000543259 PIK3C2BO00750 1634 aa18.25■□□□□ 0.51
C12orf56-206ENST00000543259 XIRP1Q702N8 1843 aaKnown RBP18.25■□□□□ 0.51
C12orf56-206ENST00000543259 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
C12orf56-206ENST00000543259 TOM1O60784 492 aa18.24■□□□□ 0.51
C12orf56-206ENST00000543259 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
C12orf56-206ENST00000543259 ROCK1Q13464 1354 aa18.23■□□□□ 0.51
C12orf56-206ENST00000543259 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
C12orf56-206ENST00000543259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
C12orf56-206ENST00000543259 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
C12orf56-206ENST00000543259 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
C12orf56-206ENST00000543259 RPRD2Q5VT52 1461 aaKnown RBP18.19■□□□□ 0.5
C12orf56-206ENST00000543259 UNC13BO14795 1591 aa18.17■□□□□ 0.5
C12orf56-206ENST00000543259 LTKP29376 864 aa18.16■□□□□ 0.5
C12orf56-206ENST00000543259 TET3O43151 1660 aa18.15■□□□□ 0.5
C12orf56-206ENST00000543259 ADGRB3O60242 1522 aa18.13■□□□□ 0.49
C12orf56-206ENST00000543259 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
C12orf56-206ENST00000543259 TMEM2Q9UHN6 1383 aa18.13■□□□□ 0.49
C12orf56-206ENST00000543259 NOS1P29475 1434 aa18.13■□□□□ 0.49
C12orf56-206ENST00000543259 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
C12orf56-206ENST00000543259 EID1Q9Y6B2 187 aa18.11■□□□□ 0.49
C12orf56-206ENST00000543259 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
C12orf56-206ENST00000543259 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms