RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 ROCK1Q13464 1354 aa15.01□□□□□ -0.01
CDH4-201ENST00000543233 ANKRD30AQ9BXX3 1397 aa15□□□□□ -0.01
CDH4-201ENST00000543233 GCC2Q8IWJ2 1684 aa15□□□□□ -0.01
CDH4-201ENST00000543233 NUP160Q12769 1436 aa15□□□□□ -0.01
CDH4-201ENST00000543233 ATP10BO94823 1461 aa15□□□□□ -0.01
CDH4-201ENST00000543233 ARID4BQ4LE39 1312 aaPredicted RBP14.99□□□□□ -0.01
CDH4-201ENST00000543233 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
CDH4-201ENST00000543233 ANKRD50Q9ULJ7 1429 aa14.98□□□□□ -0.01
CDH4-201ENST00000543233 DNMT1P26358 1616 aaKnown RBP14.98□□□□□ -0.01
CDH4-201ENST00000543233 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
CDH4-201ENST00000543233 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
CDH4-201ENST00000543233 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.02
CDH4-201ENST00000543233 RPRD2Q5VT52 1461 aaKnown RBP14.95□□□□□ -0.02
CDH4-201ENST00000543233 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
CDH4-201ENST00000543233 KIF7Q2M1P5 1343 aa14.95□□□□□ -0.02
CDH4-201ENST00000543233 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
CDH4-201ENST00000543233 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
CDH4-201ENST00000543233 PZPP20742 1482 aa14.94□□□□□ -0.02
CDH4-201ENST00000543233 C9orf84Q5VXU9 1444 aa14.93□□□□□ -0.02
CDH4-201ENST00000543233 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
CDH4-201ENST00000543233 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
CDH4-201ENST00000543233 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
CDH4-201ENST00000543233 KIAA1107Q9UPP5 1409 aa14.9□□□□□ -0.02
CDH4-201ENST00000543233 TEX14Q8IWB6 1497 aa14.9□□□□□ -0.02
CDH4-201ENST00000543233 CHD1O14646 1710 aa14.89□□□□□ -0.03
CDH4-201ENST00000543233 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
CDH4-201ENST00000543233 USP47Q96K76 1375 aa14.88□□□□□ -0.03
CDH4-201ENST00000543233 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
CDH4-201ENST00000543233 ARXQ96QS3 562 aa14.88□□□□□ -0.03
CDH4-201ENST00000543233 PNNQ9H307 717 aaKnown RBP14.88□□□□□ -0.03
CDH4-201ENST00000543233 RRAGDQ9NQL2 400 aaPredicted RBP14.87□□□□□ -0.03
CDH4-201ENST00000543233 RGS3P49796 1198 aa14.86□□□□□ -0.03
CDH4-201ENST00000543233 ABCA8O94911 1581 aa14.86□□□□□ -0.03
CDH4-201ENST00000543233 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
CDH4-201ENST00000543233 ABCC10Q5T3U5 1492 aa14.85□□□□□ -0.03
CDH4-201ENST00000543233 ITSN2Q9NZM3 1697 aa14.85□□□□□ -0.03
CDH4-201ENST00000543233 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.03
CDH4-201ENST00000543233 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.04
CDH4-201ENST00000543233 CDC42BPAQ5VT25 1732 aa14.81□□□□□ -0.04
CDH4-201ENST00000543233 ARHGAP5Q13017 1502 aa14.81□□□□□ -0.04
CDH4-201ENST00000543233 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
CDH4-201ENST00000543233 ADGRL2O95490 1459 aa14.8□□□□□ -0.04
CDH4-201ENST00000543233 SLC4A3P48751 1232 aa14.8□□□□□ -0.04
CDH4-201ENST00000543233 SPATA31E1Q6ZUB1 1445 aa14.79□□□□□ -0.04
CDH4-201ENST00000543233 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
CDH4-201ENST00000543233 MBD5Q9P267 1494 aa14.78□□□□□ -0.04
CDH4-201ENST00000543233 ROCK2O75116 1388 aaKnown RBP14.77□□□□□ -0.04
CDH4-201ENST00000543233 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.05
CDH4-201ENST00000543233 CCDC141Q6ZP82 1450 aa14.77□□□□□ -0.05
CDH4-201ENST00000543233 BBXQ8WY36 941 aaPredicted RBP14.77□□□□□ -0.05
CDH4-201ENST00000543233 ADCY10Q96PN6 1610 aa14.76□□□□□ -0.05
CDH4-201ENST00000543233 TMC1Q8TDI8 760 aa14.76□□□□□ -0.05
CDH4-201ENST00000543233 ADGBQ8N7X0 1667 aa14.76□□□□□ -0.05
CDH4-201ENST00000543233 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
CDH4-201ENST00000543233 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
CDH4-201ENST00000543233 CCDC144AA2RUR9 1427 aa14.74□□□□□ -0.05
CDH4-201ENST00000543233 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
CDH4-201ENST00000543233 CHMP4BQ9H444 224 aaKnown RBP14.74□□□□□ -0.05
CDH4-201ENST00000543233 SAMD9LQ8IVG5 1584 aa14.73□□□□□ -0.05
CDH4-201ENST00000543233 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
CDH4-201ENST00000543233 RSPH4AQ5TD94 716 aa14.72□□□□□ -0.05
CDH4-201ENST00000543233 TTC37Q6PGP7 1564 aa14.72□□□□□ -0.05
CDH4-201ENST00000543233 FRAT2O75474 233 aaPredicted RBP14.72□□□□□ -0.05
CDH4-201ENST00000543233 CROCC2H7BZ55 1655 aa14.71□□□□□ -0.05
CDH4-201ENST00000543233 KLHL34Q8N239 644 aa14.71□□□□□ -0.05
CDH4-201ENST00000543233 PDE4AP27815 886 aa14.71□□□□□ -0.05
CDH4-201ENST00000543233 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.05
CDH4-201ENST00000543233 NAP1L2Q9ULW6 460 aaPredicted RBP14.71□□□□□ -0.05
CDH4-201ENST00000543233 SHANK2Q9UPX8 1470 aa14.7□□□□□ -0.06
CDH4-201ENST00000543233 CC2D1BQ5T0F9 858 aaKnown RBP14.7□□□□□ -0.06
CDH4-201ENST00000543233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.69□□□□□ -0.06
CDH4-201ENST00000543233 DHX29Q7Z478 1369 aaKnown RBP14.69□□□□□ -0.06
CDH4-201ENST00000543233 FAM135AQ9P2D6 1515 aa14.69□□□□□ -0.06
CDH4-201ENST00000543233 SPAG9O60271 1321 aaKnown RBP14.68□□□□□ -0.06
CDH4-201ENST00000543233 BCORL1Q5H9F3 1711 aa14.68□□□□□ -0.06
CDH4-201ENST00000543233 CDC42BPBQ9Y5S2 1711 aa14.68□□□□□ -0.06
CDH4-201ENST00000543233 SENP3Q9H4L4 574 aaPredicted RBP14.68□□□□□ -0.06
CDH4-201ENST00000543233 CALD1Q05682 793 aaKnown RBP14.68□□□□□ -0.06
CDH4-201ENST00000543233 PRDM4Q9UKN5 801 aa14.68□□□□□ -0.06
CDH4-201ENST00000543233 ARID3AQ99856 593 aa14.67□□□□□ -0.06
CDH4-201ENST00000543233 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
CDH4-201ENST00000543233 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
CDH4-201ENST00000543233 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
CDH4-201ENST00000543233 ABCC2Q92887 1545 aa14.65□□□□□ -0.06
CDH4-201ENST00000543233 KIF3BO15066 747 aa14.65□□□□□ -0.06
CDH4-201ENST00000543233 CANXP27824 592 aaKnown RBP14.64□□□□□ -0.07
CDH4-201ENST00000543233 RALGAPBQ86X10 1494 aa14.64□□□□□ -0.07
CDH4-201ENST00000543233 ZHX1Q9UKY1 873 aaPredicted RBP14.64□□□□□ -0.07
CDH4-201ENST00000543233 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
CDH4-201ENST00000543233 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
CDH4-201ENST00000543233 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
CDH4-201ENST00000543233 PDCL3Q9H2J4 239 aa14.63□□□□□ -0.07
CDH4-201ENST00000543233 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
CDH4-201ENST00000543233 ARHGEF5Q12774 1597 aa14.62□□□□□ -0.07
CDH4-201ENST00000543233 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
CDH4-201ENST00000543233 KDM5CP41229 1560 aa14.61□□□□□ -0.07
CDH4-201ENST00000543233 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
CDH4-201ENST00000543233 UHRF1BP1Q6BDS2 1440 aa14.61□□□□□ -0.07
CDH4-201ENST00000543233 TCERG1O14776 1098 aaKnown RBP14.61□□□□□ -0.07
CDH4-201ENST00000543233 POGKQ9P215 609 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms