RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 KDM5DQ9BY66 1539 aa25.61■■□□□ 1.69
SCNN1A-219ENST00000542966 SHANK2Q9UPX8 1470 aa25.6■■□□□ 1.69
SCNN1A-219ENST00000542966 CROCC2H7BZ55 1655 aa25.6■■□□□ 1.69
SCNN1A-219ENST00000542966 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
SCNN1A-219ENST00000542966 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
SCNN1A-219ENST00000542966 FAM50AQ14320 339 aaKnown RBP25.58■■□□□ 1.69
SCNN1A-219ENST00000542966 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.68
SCNN1A-219ENST00000542966 KIF15Q9NS87 1388 aa25.57■■□□□ 1.68
SCNN1A-219ENST00000542966 CHIC2Q9UKJ5 165 aa25.57■■□□□ 1.68
SCNN1A-219ENST00000542966 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
SCNN1A-219ENST00000542966 FAM135AQ9P2D6 1515 aa25.56■■□□□ 1.68
SCNN1A-219ENST00000542966 EIF2AK4Q9P2K8 1649 aaKnown RBP25.55■■□□□ 1.68
SCNN1A-219ENST00000542966 FBXO31Q5XUX0 539 aaPredicted RBP25.54■■□□□ 1.68
SCNN1A-219ENST00000542966 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
SCNN1A-219ENST00000542966 RNF17Q9BXT8 1623 aaKnown RBP25.54■■□□□ 1.68
SCNN1A-219ENST00000542966 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
SCNN1A-219ENST00000542966 MYO3AQ8NEV4 1616 aa25.53■■□□□ 1.68
SCNN1A-219ENST00000542966 PZPP20742 1482 aa25.52■■□□□ 1.68
SCNN1A-219ENST00000542966 CAMSAP1Q5T5Y3 1602 aa25.49■■□□□ 1.67
SCNN1A-219ENST00000542966 CEP170BQ9Y4F5 1589 aaPredicted RBP25.49■■□□□ 1.67
SCNN1A-219ENST00000542966 ERBINQ96RT1 1412 aa25.49■■□□□ 1.67
SCNN1A-219ENST00000542966 ANKRD30AQ9BXX3 1397 aa25.49■■□□□ 1.67
SCNN1A-219ENST00000542966 ABCC3O15438 1527 aa25.48■■□□□ 1.67
SCNN1A-219ENST00000542966 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
SCNN1A-219ENST00000542966 TNRQ92752 1358 aa25.48■■□□□ 1.67
SCNN1A-219ENST00000542966 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
SCNN1A-219ENST00000542966 ZNF142P52746 1687 aaPredicted RBP25.46■■□□□ 1.67
SCNN1A-219ENST00000542966 ZC3H13Q5T200 1668 aaKnown RBP25.45■■□□□ 1.66
SCNN1A-219ENST00000542966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.44■■□□□ 1.66
SCNN1A-219ENST00000542966 NCKAP5LQ9HCH0 1330 aa25.43■■□□□ 1.66
SCNN1A-219ENST00000542966 A2ML1A8K2U0 1454 aa25.43■■□□□ 1.66
SCNN1A-219ENST00000542966 PTPRTO14522 1441 aa25.42■■□□□ 1.66
SCNN1A-219ENST00000542966 CEP152O94986 1710 aa25.41■■□□□ 1.66
SCNN1A-219ENST00000542966 ADGRL2O95490 1459 aa25.4■■□□□ 1.66
SCNN1A-219ENST00000542966 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
SCNN1A-219ENST00000542966 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
SCNN1A-219ENST00000542966 KANK1Q14678 1352 aa25.35■■□□□ 1.65
SCNN1A-219ENST00000542966 DEPDC5O75140 1603 aa25.35■■□□□ 1.65
SCNN1A-219ENST00000542966 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
SCNN1A-219ENST00000542966 NLRP1Q9C000 1473 aa25.34■■□□□ 1.65
SCNN1A-219ENST00000542966 PKD2Q13563 968 aa25.34■■□□□ 1.65
SCNN1A-219ENST00000542966 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
SCNN1A-219ENST00000542966 ITGAEP38570 1179 aa25.33■■□□□ 1.65
SCNN1A-219ENST00000542966 ANKRD50Q9ULJ7 1429 aa25.32■■□□□ 1.64
SCNN1A-219ENST00000542966 DISP3Q9P2K9 1392 aa25.31■■□□□ 1.64
SCNN1A-219ENST00000542966 ILDR2Q71H61 639 aa25.3■■□□□ 1.64
SCNN1A-219ENST00000542966 UGGT1Q9NYU2 1555 aa25.3■■□□□ 1.64
SCNN1A-219ENST00000542966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.3■■□□□ 1.64
SCNN1A-219ENST00000542966 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
SCNN1A-219ENST00000542966 THEMISQ8N1K5 641 aaPredicted RBP25.29■■□□□ 1.64
SCNN1A-219ENST00000542966 CFAP65Q6ZU64 1925 aaKnown RBP25.26■■□□□ 1.63
SCNN1A-219ENST00000542966 VWDEQ8N2E2 1590 aa25.26■■□□□ 1.63
SCNN1A-219ENST00000542966 ROCK1Q13464 1354 aa25.25■■□□□ 1.63
SCNN1A-219ENST00000542966 LMTK2Q8IWU2 1503 aa25.25■■□□□ 1.63
SCNN1A-219ENST00000542966 ANKLE2Q86XL3 938 aa25.23■■□□□ 1.63
SCNN1A-219ENST00000542966 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
SCNN1A-219ENST00000542966 LTBP4Q8N2S1 1624 aa25.22■■□□□ 1.63
SCNN1A-219ENST00000542966 POLR1AO95602 1720 aaPredicted RBP25.2■■□□□ 1.63
SCNN1A-219ENST00000542966 NEURL4Q96JN8 1562 aa25.2■■□□□ 1.62
SCNN1A-219ENST00000542966 RRBP1Q9P2E9 1410 aaKnown RBP25.19■■□□□ 1.62
SCNN1A-219ENST00000542966 EFCAB6Q5THR3 1501 aa25.18■■□□□ 1.62
SCNN1A-219ENST00000542966 SOCS7O14512 581 aa25.17■■□□□ 1.62
SCNN1A-219ENST00000542966 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
SCNN1A-219ENST00000542966 UNC13BO14795 1591 aa25.14■■□□□ 1.61
SCNN1A-219ENST00000542966 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
SCNN1A-219ENST00000542966 STAG3Q9UJ98 1225 aa25.13■■□□□ 1.61
SCNN1A-219ENST00000542966 PIK3C2BO00750 1634 aa25.12■■□□□ 1.61
SCNN1A-219ENST00000542966 NOS1P29475 1434 aa25.12■■□□□ 1.61
SCNN1A-219ENST00000542966 SYNMO15061 1565 aa25.11■■□□□ 1.61
SCNN1A-219ENST00000542966 MED14O60244 1454 aa25.11■■□□□ 1.61
SCNN1A-219ENST00000542966 IDI1Q13907 227 aa25.11■■□□□ 1.61
SCNN1A-219ENST00000542966 IQSEC2Q5JU85 1478 aa25.1■■□□□ 1.61
SCNN1A-219ENST00000542966 TET3O43151 1660 aa25.09■■□□□ 1.61
SCNN1A-219ENST00000542966 RPRD2Q5VT52 1461 aaKnown RBP25.08■■□□□ 1.6
SCNN1A-219ENST00000542966 NUP155O75694 1391 aa25.07■■□□□ 1.6
SCNN1A-219ENST00000542966 UBAP1LF5GYI3 381 aa25.07■■□□□ 1.6
SCNN1A-219ENST00000542966 LTKP29376 864 aa25.07■■□□□ 1.6
SCNN1A-219ENST00000542966 TXNDC2Q86VQ3 553 aa25.07■■□□□ 1.6
SCNN1A-219ENST00000542966 SCAF11Q99590 1463 aaKnown RBP25.06■■□□□ 1.6
SCNN1A-219ENST00000542966 ARHGAP23Q9P227 1491 aa25.06■■□□□ 1.6
SCNN1A-219ENST00000542966 IQGAP1P46940 1657 aa25.06■■□□□ 1.6
SCNN1A-219ENST00000542966 SLIT1O75093 1534 aa25.05■■□□□ 1.6
SCNN1A-219ENST00000542966 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
SCNN1A-219ENST00000542966 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
SCNN1A-219ENST00000542966 EID1Q9Y6B2 187 aa25.04■■□□□ 1.6
SCNN1A-219ENST00000542966 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
SCNN1A-219ENST00000542966 TMEM2Q9UHN6 1383 aa25.04■■□□□ 1.6
SCNN1A-219ENST00000542966 E9PCH4 1651 aa25.01■■□□□ 1.59
SCNN1A-219ENST00000542966 ADGRB3O60242 1522 aa25■■□□□ 1.59
SCNN1A-219ENST00000542966 NAIPQ13075 1403 aa24.99■■□□□ 1.59
SCNN1A-219ENST00000542966 KDM5AP29375 1690 aaKnown RBP24.98■■□□□ 1.59
SCNN1A-219ENST00000542966 CPS1P31327 1500 aa24.98■■□□□ 1.59
SCNN1A-219ENST00000542966 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
SCNN1A-219ENST00000542966 HFM1A2PYH4 1435 aa24.91■■□□□ 1.58
SCNN1A-219ENST00000542966 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
SCNN1A-219ENST00000542966 STRCP1A6NGW2 1772 aa24.88■■□□□ 1.57
SCNN1A-219ENST00000542966 TMEM131LA2VDJ0 1609 aa24.88■■□□□ 1.57
SCNN1A-219ENST00000542966 TRIM52Q96A61 297 aa24.88■■□□□ 1.57
SCNN1A-219ENST00000542966 BCANQ96GW7 911 aa24.88■■□□□ 1.57
SCNN1A-219ENST00000542966 SLC26A8Q96RN1 970 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms