RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 IQSEC2Q5JU85 1478 aa27.53■■■□□ 2
PPP1CA-210ENST00000542876 ARHGEF5Q12774 1597 aa27.52■■■□□ 2
PPP1CA-210ENST00000542876 A2ML1A8K2U0 1454 aa27.51■■■□□ 2
PPP1CA-210ENST00000542876 KDM5DQ9BY66 1539 aa27.51■■□□□ 1.99
PPP1CA-210ENST00000542876 FAM135AQ9P2D6 1515 aa27.51■■□□□ 1.99
PPP1CA-210ENST00000542876 TCOF1Q13428 1488 aaKnown RBP27.51■■□□□ 1.99
PPP1CA-210ENST00000542876 TNRQ92752 1358 aa27.5■■□□□ 1.99
PPP1CA-210ENST00000542876 ZNF335Q9H4Z2 1342 aaPredicted RBP27.49■■□□□ 1.99
PPP1CA-210ENST00000542876 FBXO31Q5XUX0 539 aaPredicted RBP27.49■■□□□ 1.99
PPP1CA-210ENST00000542876 PZPP20742 1482 aa27.47■■□□□ 1.99
PPP1CA-210ENST00000542876 KANK4Q5T7N3 995 aaPredicted RBP27.46■■□□□ 1.99
PPP1CA-210ENST00000542876 MAP3K1Q13233 1512 aa27.45■■□□□ 1.98
PPP1CA-210ENST00000542876 DNMT1P26358 1616 aaKnown RBP27.42■■□□□ 1.98
PPP1CA-210ENST00000542876 MIA2Q96PC5 1412 aa27.41■■□□□ 1.98
PPP1CA-210ENST00000542876 MYOM3Q5VTT5 1437 aa27.41■■□□□ 1.98
PPP1CA-210ENST00000542876 DISP3Q9P2K9 1392 aa27.4■■□□□ 1.98
PPP1CA-210ENST00000542876 APLP2Q06481 763 aa27.4■■□□□ 1.98
PPP1CA-210ENST00000542876 THEMISQ8N1K5 641 aaPredicted RBP27.4■■□□□ 1.98
PPP1CA-210ENST00000542876 UBAP1LF5GYI3 381 aa27.39■■□□□ 1.98
PPP1CA-210ENST00000542876 ANKLE2Q86XL3 938 aa27.37■■□□□ 1.97
PPP1CA-210ENST00000542876 MAST1Q9Y2H9 1570 aa27.37■■□□□ 1.97
PPP1CA-210ENST00000542876 NLRP1Q9C000 1473 aa27.37■■□□□ 1.97
PPP1CA-210ENST00000542876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.34■■□□□ 1.975e-6■■■■■ 46.2
PPP1CA-210ENST00000542876 UGGT1Q9NYU2 1555 aa27.31■■□□□ 1.96
PPP1CA-210ENST00000542876 RNF17Q9BXT8 1623 aaKnown RBP27.3■■□□□ 1.96
PPP1CA-210ENST00000542876 ABCC3O15438 1527 aa27.3■■□□□ 1.96
PPP1CA-210ENST00000542876 EIF2AK4Q9P2K8 1649 aaKnown RBP27.28■■□□□ 1.96
PPP1CA-210ENST00000542876 POLR1AO95602 1720 aaPredicted RBP27.27■■□□□ 1.96
PPP1CA-210ENST00000542876 ZC3H13Q5T200 1668 aaKnown RBP27.27■■□□□ 1.96
PPP1CA-210ENST00000542876 DUOX2Q9NRD8 1548 aa27.26■■□□□ 1.96
PPP1CA-210ENST00000542876 NEURL4Q96JN8 1562 aa27.26■■□□□ 1.95
PPP1CA-210ENST00000542876 KIF15Q9NS87 1388 aa27.24■■□□□ 1.95
PPP1CA-210ENST00000542876 SHANK2Q9UPX8 1470 aa27.24■■□□□ 1.95
PPP1CA-210ENST00000542876 CPS1P31327 1500 aa27.23■■□□□ 1.95
PPP1CA-210ENST00000542876 NPHP4O75161 1426 aaPredicted RBP27.23■■□□□ 1.95
PPP1CA-210ENST00000542876 ERVK-7P63135 1459 aa27.22■■□□□ 1.95
PPP1CA-210ENST00000542876 RRP7BPQ9NSQ0 103 aa27.22■■□□□ 1.95
PPP1CA-210ENST00000542876 SPATA31D1Q6ZQQ2 1576 aa27.22■■□□□ 1.95
PPP1CA-210ENST00000542876 SCAF1Q9H7N4 1312 aaKnown RBP27.2■■□□□ 1.95
PPP1CA-210ENST00000542876 ABCC5O15440 1437 aa27.2■■□□□ 1.94
PPP1CA-210ENST00000542876 TOM1O60784 492 aa27.2■■□□□ 1.94
PPP1CA-210ENST00000542876 MED14O60244 1454 aa27.19■■□□□ 1.94
PPP1CA-210ENST00000542876 ERBINQ96RT1 1412 aa27.19■■□□□ 1.94
PPP1CA-210ENST00000542876 ILDR2Q71H61 639 aa27.19■■□□□ 1.94
PPP1CA-210ENST00000542876 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
PPP1CA-210ENST00000542876 PTPN23Q9H3S7 1636 aa27.18■■□□□ 1.94
PPP1CA-210ENST00000542876 DEPDC5O75140 1603 aa27.17■■□□□ 1.94
PPP1CA-210ENST00000542876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.16■■□□□ 1.94
PPP1CA-210ENST00000542876 DAPK1P53355 1430 aa27.16■■□□□ 1.94
PPP1CA-210ENST00000542876 PIP4K2BP78356 416 aa27.15■■□□□ 1.94
PPP1CA-210ENST00000542876 FGD6Q6ZV73 1430 aa27.15■■□□□ 1.94
PPP1CA-210ENST00000542876 KANK1Q14678 1352 aa27.14■■□□□ 1.94
PPP1CA-210ENST00000542876 ARHGAP31Q2M1Z3 1444 aa27.12■■□□□ 1.93
PPP1CA-210ENST00000542876 VWDEQ8N2E2 1590 aa27.12■■□□□ 1.93
PPP1CA-210ENST00000542876 CEP152O94986 1710 aa27.12■■□□□ 1.93
PPP1CA-210ENST00000542876 PRDM15P57071 1507 aaPredicted RBP27.11■■□□□ 1.93
PPP1CA-210ENST00000542876 ANKRD30AQ9BXX3 1397 aa27.11■■□□□ 1.93
PPP1CA-210ENST00000542876 CHIC2Q9UKJ5 165 aa27.11■■□□□ 1.93
PPP1CA-210ENST00000542876 CROCC2H7BZ55 1655 aa27.11■■□□□ 1.93
PPP1CA-210ENST00000542876 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
PPP1CA-210ENST00000542876 SOCS7O14512 581 aa27.09■■□□□ 1.93
PPP1CA-210ENST00000542876 HSPA1LP34931 641 aa27.06■■□□□ 1.92
PPP1CA-210ENST00000542876 TXNDC2Q86VQ3 553 aa27.06■■□□□ 1.92
PPP1CA-210ENST00000542876 STAG3Q9UJ98 1225 aa27.06■■□□□ 1.92
PPP1CA-210ENST00000542876 EID1Q9Y6B2 187 aa27.06■■□□□ 1.92
PPP1CA-210ENST00000542876 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
PPP1CA-210ENST00000542876 CFAP65Q6ZU64 1925 aaKnown RBP27.03■■□□□ 1.92
PPP1CA-210ENST00000542876 UBR1Q8IWV7 1749 aa27.03■■□□□ 1.92
PPP1CA-210ENST00000542876 LTKP29376 864 aa27.01■■□□□ 1.91
PPP1CA-210ENST00000542876 FAM50AQ14320 339 aaKnown RBP27.01■■□□□ 1.91
PPP1CA-210ENST00000542876 SLIT1O75093 1534 aa26.99■■□□□ 1.91
PPP1CA-210ENST00000542876 ARHGAP23Q9P227 1491 aa26.99■■□□□ 1.91
PPP1CA-210ENST00000542876 LRRC7Q96NW7 1537 aa26.97■■□□□ 1.91
PPP1CA-210ENST00000542876 LMTK2Q8IWU2 1503 aa26.96■■□□□ 1.91
PPP1CA-210ENST00000542876 TMEM2Q9UHN6 1383 aa26.96■■□□□ 1.91
PPP1CA-210ENST00000542876 SYNMO15061 1565 aa26.94■■□□□ 1.9
PPP1CA-210ENST00000542876 IDI1Q13907 227 aa26.93■■□□□ 1.9
PPP1CA-210ENST00000542876 ADGRL2O95490 1459 aa26.93■■□□□ 1.9
PPP1CA-210ENST00000542876 PIK3C2BO00750 1634 aa26.92■■□□□ 1.9
PPP1CA-210ENST00000542876 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
PPP1CA-210ENST00000542876 STRCP1A6NGW2 1772 aa26.89■■□□□ 1.9
PPP1CA-210ENST00000542876 ANKRD50Q9ULJ7 1429 aa26.89■■□□□ 1.89
PPP1CA-210ENST00000542876 SLC52A1Q9NWF4 448 aa26.88■■□□□ 1.89
PPP1CA-210ENST00000542876 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
PPP1CA-210ENST00000542876 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
PPP1CA-210ENST00000542876 NOS1P29475 1434 aa26.86■■□□□ 1.89
PPP1CA-210ENST00000542876 MED1Q15648 1581 aaPredicted RBP26.84■■□□□ 1.89
PPP1CA-210ENST00000542876 KDM5AP29375 1690 aaKnown RBP26.83■■□□□ 1.89
PPP1CA-210ENST00000542876 BCANQ96GW7 911 aa26.82■■□□□ 1.88
PPP1CA-210ENST00000542876 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
PPP1CA-210ENST00000542876 RPRD2Q5VT52 1461 aaKnown RBP26.81■■□□□ 1.88
PPP1CA-210ENST00000542876 SLC26A8Q96RN1 970 aa26.81■■□□□ 1.88
PPP1CA-210ENST00000542876 KCNA6P17658 529 aa26.8■■□□□ 1.88
PPP1CA-210ENST00000542876 ADGRB3O60242 1522 aa26.79■■□□□ 1.88
PPP1CA-210ENST00000542876 HDGFP51858 240 aaKnown RBP26.77■■□□□ 1.88
PPP1CA-210ENST00000542876 TMEM94Q12767 1356 aa26.75■■□□□ 1.87
PPP1CA-210ENST00000542876 PROSER2Q86WR7 435 aaPredicted RBP26.75■■□□□ 1.87
PPP1CA-210ENST00000542876 PPP1R15AO75807 674 aaPredicted RBP26.74■■□□□ 1.87
PPP1CA-210ENST00000542876 TET3O43151 1660 aa26.72■■□□□ 1.87
PPP1CA-210ENST00000542876 ROCK1Q13464 1354 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms