RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 ILDR1Q86SU0 546 aaPredicted RBP27.09■■□□□ 1.93
LTBR-210ENST00000542830 DAPK1P53355 1430 aa27.08■■□□□ 1.93
LTBR-210ENST00000542830 DUOX2Q9NRD8 1548 aa27.08■■□□□ 1.93
LTBR-210ENST00000542830 EIF2AK4Q9P2K8 1649 aaKnown RBP27.08■■□□□ 1.93
LTBR-210ENST00000542830 CROCC2H7BZ55 1655 aa27.08■■□□□ 1.92
LTBR-210ENST00000542830 DNMT1P26358 1616 aaKnown RBP27.06■■□□□ 1.92
LTBR-210ENST00000542830 RNF17Q9BXT8 1623 aaKnown RBP27.06■■□□□ 1.92
LTBR-210ENST00000542830 STRCQ7RTU9 1775 aa27.05■■□□□ 1.92
LTBR-210ENST00000542830 KIF15Q9NS87 1388 aa27.05■■□□□ 1.92
LTBR-210ENST00000542830 PZPP20742 1482 aa27.04■■□□□ 1.92
LTBR-210ENST00000542830 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
LTBR-210ENST00000542830 NCOA1Q15788 1441 aa27.01■■□□□ 1.91
LTBR-210ENST00000542830 ZNF142P52746 1687 aaPredicted RBP27.01■■□□□ 1.91
LTBR-210ENST00000542830 ERBINQ96RT1 1412 aa27■■□□□ 1.91
LTBR-210ENST00000542830 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
LTBR-210ENST00000542830 CEP170BQ9Y4F5 1589 aaPredicted RBP27■■□□□ 1.91
LTBR-210ENST00000542830 PTPRTO14522 1441 aa26.99■■□□□ 1.91
LTBR-210ENST00000542830 ZC3H13Q5T200 1668 aaKnown RBP26.98■■□□□ 1.91
LTBR-210ENST00000542830 ANKRD30AQ9BXX3 1397 aa26.98■■□□□ 1.91
LTBR-210ENST00000542830 CAMSAP1Q5T5Y3 1602 aa26.98■■□□□ 1.91
LTBR-210ENST00000542830 TNRQ92752 1358 aa26.97■■□□□ 1.91
LTBR-210ENST00000542830 ABCC3O15438 1527 aa26.97■■□□□ 1.91
LTBR-210ENST00000542830 FAM50AQ14320 339 aaKnown RBP26.97■■□□□ 1.91
LTBR-210ENST00000542830 A2ML1A8K2U0 1454 aa26.96■■□□□ 1.91
LTBR-210ENST00000542830 FBXO31Q5XUX0 539 aaPredicted RBP26.96■■□□□ 1.91
LTBR-210ENST00000542830 FBXO41Q8TF61 875 aa26.95■■□□□ 1.9
LTBR-210ENST00000542830 PLA2R1Q13018 1463 aa26.94■■□□□ 1.9
LTBR-210ENST00000542830 CHIC2Q9UKJ5 165 aa26.94■■□□□ 1.9
LTBR-210ENST00000542830 MROH1Q8NDA8 1641 aa26.94■■□□□ 1.9
LTBR-210ENST00000542830 PKD2Q13563 968 aa26.91■■□□□ 1.9
LTBR-210ENST00000542830 PRDM15P57071 1507 aaPredicted RBP26.9■■□□□ 1.9
LTBR-210ENST00000542830 ADGRL2O95490 1459 aa26.9■■□□□ 1.9
LTBR-210ENST00000542830 CERKQ8TCT0 537 aa26.89■■□□□ 1.9
LTBR-210ENST00000542830 NLRP1Q9C000 1473 aa26.88■■□□□ 1.89
LTBR-210ENST00000542830 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
LTBR-210ENST00000542830 KANK1Q14678 1352 aa26.85■■□□□ 1.89
LTBR-210ENST00000542830 CEP152O94986 1710 aa26.85■■□□□ 1.89
LTBR-210ENST00000542830 SPATA31D1Q6ZQQ2 1576 aa26.84■■□□□ 1.89
LTBR-210ENST00000542830 DEPDC5O75140 1603 aa26.84■■□□□ 1.89
LTBR-210ENST00000542830 ERVK-7P63135 1459 aa26.83■■□□□ 1.89
LTBR-210ENST00000542830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.83■■□□□ 1.891e-7■□□□□ 11
LTBR-210ENST00000542830 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
LTBR-210ENST00000542830 THEMISQ8N1K5 641 aaPredicted RBP26.81■■□□□ 1.88
LTBR-210ENST00000542830 UGGT1Q9NYU2 1555 aa26.79■■□□□ 1.88
LTBR-210ENST00000542830 ANKRD50Q9ULJ7 1429 aa26.78■■□□□ 1.88
LTBR-210ENST00000542830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.77■■□□□ 1.88
LTBR-210ENST00000542830 LMTK2Q8IWU2 1503 aa26.76■■□□□ 1.87
LTBR-210ENST00000542830 PPARGC1BQ86YN6 1023 aaKnown RBP26.76■■□□□ 1.87
LTBR-210ENST00000542830 VWDEQ8N2E2 1590 aa26.75■■□□□ 1.87
LTBR-210ENST00000542830 ROCK1Q13464 1354 aa26.74■■□□□ 1.87
LTBR-210ENST00000542830 ANKLE2Q86XL3 938 aa26.74■■□□□ 1.87
LTBR-210ENST00000542830 CFAP65Q6ZU64 1925 aaKnown RBP26.73■■□□□ 1.87
LTBR-210ENST00000542830 LTBP4Q8N2S1 1624 aa26.72■■□□□ 1.87
LTBR-210ENST00000542830 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.87
LTBR-210ENST00000542830 IQSEC2Q5JU85 1478 aa26.67■■□□□ 1.86
LTBR-210ENST00000542830 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
LTBR-210ENST00000542830 ZNF335Q9H4Z2 1342 aaPredicted RBP26.66■■□□□ 1.86
LTBR-210ENST00000542830 EFCAB6Q5THR3 1501 aa26.65■■□□□ 1.86
LTBR-210ENST00000542830 MED14O60244 1454 aa26.64■■□□□ 1.86
LTBR-210ENST00000542830 ITGAEP38570 1179 aa26.64■■□□□ 1.86
LTBR-210ENST00000542830 UBR1Q8IWV7 1749 aa26.62■■□□□ 1.85
LTBR-210ENST00000542830 NPHP4O75161 1426 aaPredicted RBP26.62■■□□□ 1.85
LTBR-210ENST00000542830 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
LTBR-210ENST00000542830 RPRD2Q5VT52 1461 aaKnown RBP26.61■■□□□ 1.85
LTBR-210ENST00000542830 UNC13BO14795 1591 aa26.59■■□□□ 1.85
LTBR-210ENST00000542830 NOS1P29475 1434 aa26.59■■□□□ 1.85
LTBR-210ENST00000542830 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
LTBR-210ENST00000542830 TET3O43151 1660 aa26.57■■□□□ 1.84
LTBR-210ENST00000542830 ARHGAP23Q9P227 1491 aa26.56■■□□□ 1.84
LTBR-210ENST00000542830 SLIT1O75093 1534 aa26.56■■□□□ 1.84
LTBR-210ENST00000542830 SLC52A1Q9NWF4 448 aa26.56■■□□□ 1.84
LTBR-210ENST00000542830 PIK3C2BO00750 1634 aa26.55■■□□□ 1.84
LTBR-210ENST00000542830 IDI1Q13907 227 aa26.55■■□□□ 1.84
LTBR-210ENST00000542830 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
LTBR-210ENST00000542830 SYNMO15061 1565 aa26.54■■□□□ 1.84
LTBR-210ENST00000542830 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
LTBR-210ENST00000542830 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
LTBR-210ENST00000542830 EID1Q9Y6B2 187 aa26.53■■□□□ 1.84
LTBR-210ENST00000542830 CPS1P31327 1500 aa26.52■■□□□ 1.84
LTBR-210ENST00000542830 TXNDC2Q86VQ3 553 aa26.52■■□□□ 1.84
LTBR-210ENST00000542830 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
LTBR-210ENST00000542830 TMEM2Q9UHN6 1383 aa26.51■■□□□ 1.83
LTBR-210ENST00000542830 IQGAP3Q86VI3 1631 aa26.5■■□□□ 1.83
LTBR-210ENST00000542830 NUP155O75694 1391 aa26.49■■□□□ 1.83
LTBR-210ENST00000542830 LTKP29376 864 aa26.49■■□□□ 1.83
LTBR-210ENST00000542830 ADGRB3O60242 1522 aa26.47■■□□□ 1.83
LTBR-210ENST00000542830 E9PCH4 1651 aa26.42■■□□□ 1.82
LTBR-210ENST00000542830 UBAP1LF5GYI3 381 aa26.41■■□□□ 1.82
LTBR-210ENST00000542830 NAIPQ13075 1403 aa26.39■■□□□ 1.82
LTBR-210ENST00000542830 HDGFP51858 240 aaKnown RBP26.36■■□□□ 1.81
LTBR-210ENST00000542830 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
LTBR-210ENST00000542830 TMEM131LA2VDJ0 1609 aa26.33■■□□□ 1.81
LTBR-210ENST00000542830 TOM1O60784 492 aa26.33■■□□□ 1.81
LTBR-210ENST00000542830 ZFYVE9O95405 1425 aa26.31■■□□□ 1.8
LTBR-210ENST00000542830 STRCP1A6NGW2 1772 aa26.31■■□□□ 1.8
LTBR-210ENST00000542830 CHGAP10645 457 aaKnown RBP26.31■■□□□ 1.8
LTBR-210ENST00000542830 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
LTBR-210ENST00000542830 LRRC7Q96NW7 1537 aa26.3■■□□□ 1.8
LTBR-210ENST00000542830 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.29■■□□□ 1.8
LTBR-210ENST00000542830 MYO5BQ9ULV0 1848 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms