RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-208	ENST00000542602	MROH2A	A6NES4	1674 aa		29.12	■■■□□ 2.25
PSMD9-208	ENST00000542602	C3	P01024	1663 aa		29.12	■■■□□ 2.25
PSMD9-208	ENST00000542602	DNMT1	P26358	1616 aa	Known RBP	29.12	■■■□□ 2.25
PSMD9-208	ENST00000542602	FAM135A	Q9P2D6	1515 aa		29.11	■■■□□ 2.25
PSMD9-208	ENST00000542602	NCOA1	Q15788	1441 aa		29.09	■■■□□ 2.25
PSMD9-208	ENST00000542602	PTPRK	Q15262	1439 aa		29.08	■■■□□ 2.25
PSMD9-208	ENST00000542602	CLTC	Q00610	1675 aa	Known RBP	29.07	■■■□□ 2.24
PSMD9-208	ENST00000542602	ERBIN	Q96RT1	1412 aa		29.07	■■■□□ 2.24
PSMD9-208	ENST00000542602	PREX1	Q8TCU6	1659 aa		29.06	■■■□□ 2.24
PSMD9-208	ENST00000542602	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.05	■■■□□ 2.24
PSMD9-208	ENST00000542602	KDM5D	Q9BY66	1539 aa		29.04	■■■□□ 2.24
PSMD9-208	ENST00000542602	DMRT2	Q9Y5R5	561 aa		29.04	■■■□□ 2.24
PSMD9-208	ENST00000542602	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.02	■■■□□ 2.24
PSMD9-208	ENST00000542602	CROCC2	H7BZ55	1655 aa		29.02	■■■□□ 2.24
PSMD9-208	ENST00000542602	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.01	■■■□□ 2.23
PSMD9-208	ENST00000542602	ADGRL2	O95490	1459 aa		29	■■■□□ 2.23
PSMD9-208	ENST00000542602	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.98	■■■□□ 2.23
PSMD9-208	ENST00000542602	RNF17	Q9BXT8	1623 aa	Known RBP	28.98	■■■□□ 2.23
PSMD9-208	ENST00000542602	PZP	P20742	1482 aa		28.97	■■■□□ 2.23
PSMD9-208	ENST00000542602	KANK1	Q14678	1352 aa		28.97	■■■□□ 2.23
PSMD9-208	ENST00000542602	TNR	Q92752	1358 aa		28.95	■■■□□ 2.22
PSMD9-208	ENST00000542602	ROCK1	Q13464	1354 aa		28.93	■■■□□ 2.22
PSMD9-208	ENST00000542602	ITGAE	P38570	1179 aa		28.92	■■■□□ 2.22
PSMD9-208	ENST00000542602	ABCC3	O15438	1527 aa		28.92	■■■□□ 2.22
PSMD9-208	ENST00000542602	ANKRD50	Q9ULJ7	1429 aa		28.92	■■■□□ 2.22
PSMD9-208	ENST00000542602	MROH1	Q8NDA8	1641 aa		28.87	■■■□□ 2.21
PSMD9-208	ENST00000542602	RRBP1	Q9P2E9	1410 aa	Known RBP	28.86	■■■□□ 2.21
PSMD9-208	ENST00000542602	ZC3H13	Q5T200	1668 aa	Known RBP	28.86	■■■□□ 2.21
PSMD9-208	ENST00000542602	ARHGAP31	Q2M1Z3	1444 aa		28.86	■■■□□ 2.21
PSMD9-208	ENST00000542602	PKD2	Q13563	968 aa		28.85	■■■□□ 2.21
PSMD9-208	ENST00000542602	THEMIS	Q8N1K5	641 aa	Predicted RBP	28.85	■■■□□ 2.21
PSMD9-208	ENST00000542602	A2ML1	A8K2U0	1454 aa		28.85	■■■□□ 2.21
PSMD9-208	ENST00000542602	PRDM15	P57071	1507 aa	Predicted RBP	28.84	■■■□□ 2.21
PSMD9-208	ENST00000542602	NLRP1	Q9C000	1473 aa		28.82	■■■□□ 2.2
PSMD9-208	ENST00000542602	PTPRT	O14522	1441 aa		28.81	■■■□□ 2.2
PSMD9-208	ENST00000542602	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.8	■■■□□ 2.2
PSMD9-208	ENST00000542602	MYO3A	Q8NEV4	1616 aa		28.8	■■■□□ 2.2
PSMD9-208	ENST00000542602	DEPDC5	O75140	1603 aa		28.79	■■■□□ 2.2
PSMD9-208	ENST00000542602	PLA2R1	Q13018	1463 aa		28.78	■■■□□ 2.2
PSMD9-208	ENST00000542602	NCKAP5L	Q9HCH0	1330 aa		28.78	■■■□□ 2.2
PSMD9-208	ENST00000542602	CAMSAP1	Q5T5Y3	1602 aa		28.78	■■■□□ 2.2
PSMD9-208	ENST00000542602	LMTK2	Q8IWU2	1503 aa		28.77	■■■□□ 2.2
PSMD9-208	ENST00000542602	ERVK-7	P63135	1459 aa		28.77	■■■□□ 2.2
PSMD9-208	ENST00000542602	SPATA31D1	Q6ZQQ2	1576 aa		28.75	■■■□□ 2.19
PSMD9-208	ENST00000542602	STRC	Q7RTU9	1775 aa		28.75	■■■□□ 2.19
PSMD9-208	ENST00000542602	ZNF142	P52746	1687 aa	Predicted RBP	28.74	■■■□□ 2.19
PSMD9-208	ENST00000542602	ANKLE2	Q86XL3	938 aa		28.73	■■■□□ 2.19
PSMD9-208	ENST00000542602	VWDE	Q8N2E2	1590 aa		28.73	■■■□□ 2.19
PSMD9-208	ENST00000542602	CEP152	O94986	1710 aa		28.7	■■■□□ 2.19
PSMD9-208	ENST00000542602	UGGT1	Q9NYU2	1555 aa		28.67	■■■□□ 2.18
PSMD9-208	ENST00000542602	CERK	Q8TCT0	537 aa		28.67	■■■□□ 2.18
PSMD9-208	ENST00000542602	SLC52A1	Q9NWF4	448 aa		28.67	■■■□□ 2.18
PSMD9-208	ENST00000542602	NUP155	O75694	1391 aa		28.66	■■■□□ 2.18
PSMD9-208	ENST00000542602	ILDR1	Q86SU0	546 aa	Predicted RBP	28.65	■■■□□ 2.18
PSMD9-208	ENST00000542602	STAG3	Q9UJ98	1225 aa		28.64	■■■□□ 2.18
PSMD9-208	ENST00000542602	IDI1	Q13907	227 aa		28.63	■■■□□ 2.17
PSMD9-208	ENST00000542602	FBXO41	Q8TF61	875 aa		28.63	■■■□□ 2.17
PSMD9-208	ENST00000542602	RPRD2	Q5VT52	1461 aa	Known RBP	28.63	■■■□□ 2.17
PSMD9-208	ENST00000542602	NOS1	P29475	1434 aa		28.6	■■■□□ 2.17
PSMD9-208	ENST00000542602	EFCAB6	Q5THR3	1501 aa		28.6	■■■□□ 2.17
PSMD9-208	ENST00000542602	CFAP65	Q6ZU64	1925 aa	Known RBP	28.58	■■■□□ 2.17
PSMD9-208	ENST00000542602	UNC13B	O14795	1591 aa		28.58	■■■□□ 2.17
PSMD9-208	ENST00000542602	NAIP	Q13075	1403 aa		28.57	■■■□□ 2.16
PSMD9-208	ENST00000542602	EID1	Q9Y6B2	187 aa		28.56	■■■□□ 2.16
PSMD9-208	ENST00000542602	TXNDC2	Q86VQ3	553 aa		28.54	■■■□□ 2.16
PSMD9-208	ENST00000542602	HFM1	A2PYH4	1435 aa		28.53	■■■□□ 2.16
PSMD9-208	ENST00000542602	MED14	O60244	1454 aa		28.52	■■■□□ 2.16
PSMD9-208	ENST00000542602	TET3	O43151	1660 aa		28.51	■■■□□ 2.16
PSMD9-208	ENST00000542602	NPHP4	O75161	1426 aa	Predicted RBP	28.5	■■■□□ 2.15
PSMD9-208	ENST00000542602	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.49	■■■□□ 2.15
PSMD9-208	ENST00000542602	TMEM2	Q9UHN6	1383 aa		28.49	■■■□□ 2.15
PSMD9-208	ENST00000542602	LTK	P29376	864 aa		28.48	■■■□□ 2.15
PSMD9-208	ENST00000542602	HDGF	P51858	240 aa	Known RBP	28.48	■■■□□ 2.15
PSMD9-208	ENST00000542602	TRIM52	Q96A61	297 aa		28.48	■■■□□ 2.15
PSMD9-208	ENST00000542602	IQGAP3	Q86VI3	1631 aa		28.47	■■■□□ 2.15
PSMD9-208	ENST00000542602	ARHGAP23	Q9P227	1491 aa		28.46	■■■□□ 2.15
PSMD9-208	ENST00000542602	SLIT1	O75093	1534 aa		28.45	■■■□□ 2.15
PSMD9-208	ENST00000542602	UBR1	Q8IWV7	1749 aa		28.45	■■■□□ 2.14
PSMD9-208	ENST00000542602	SYNM	O15061	1565 aa		28.45	■■■□□ 2.14
PSMD9-208	ENST00000542602	ACIN1	Q9UKV3	1341 aa	Known RBP	28.43	■■■□□ 2.14
PSMD9-208	ENST00000542602	LTBP4	Q8N2S1	1624 aa		28.43	■■■□□ 2.14
PSMD9-208	ENST00000542602	GCC2	Q8IWJ2	1684 aa		28.43	■■■□□ 2.14
PSMD9-208	ENST00000542602	NEURL4	Q96JN8	1562 aa		28.43	■■■□□ 2.14
PSMD9-208	ENST00000542602	SCAF11	Q99590	1463 aa	Known RBP	28.43	■■■□□ 2.14
PSMD9-208	ENST00000542602	PIK3C2B	O00750	1634 aa		28.42	■■■□□ 2.14
PSMD9-208	ENST00000542602	POLR1A	O95602	1720 aa	Predicted RBP	28.4	■■■□□ 2.14
PSMD9-208	ENST00000542602	KDM5A	P29375	1690 aa	Known RBP	28.39	■■■□□ 2.14
PSMD9-208	ENST00000542602	CHGA	P10645	457 aa	Known RBP	28.39	■■■□□ 2.14
PSMD9-208	ENST00000542602	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.37	■■■□□ 2.13
PSMD9-208	ENST00000542602	IQSEC2	Q5JU85	1478 aa		28.37	■■■□□ 2.13
PSMD9-208	ENST00000542602		E9PCH4	1651 aa		28.36	■■■□□ 2.13
PSMD9-208	ENST00000542602	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.36	■■■□□ 2.13
PSMD9-208	ENST00000542602	ADGRB3	O60242	1522 aa		28.34	■■■□□ 2.13
PSMD9-208	ENST00000542602	IQGAP1	P46940	1657 aa		28.3	■■■□□ 2.12
PSMD9-208	ENST00000542602	PPP1R15A	O75807	674 aa	Predicted RBP	28.3	■■■□□ 2.12
PSMD9-208	ENST00000542602	BCAN	Q96GW7	911 aa		28.3	■■■□□ 2.12
PSMD9-208	ENST00000542602	CPS1	P31327	1500 aa		28.29	■■■□□ 2.12
PSMD9-208	ENST00000542602	SETD5	Q9C0A6	1442 aa		28.27	■■■□□ 2.12
PSMD9-208	ENST00000542602	RIMS2	Q9UQ26	1411 aa		28.27	■■■□□ 2.12
PSMD9-208	ENST00000542602	MPHOSPH9	Q99550	1183 aa		28.25	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms