RNA–Protein interactions for RNA: ENST00000542447.6

CADM1-212, Transcript of cell adhesion molecule 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CADM1, Length 4,223 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-212ENST00000542447 BCAR3O75815 825 aa14.69□□□□□ -0.06
CADM1-212ENST00000542447 RRP9O43818 475 aaKnown RBP14.68□□□□□ -0.06
CADM1-212ENST00000542447 TDRD9Q8NDG6 1382 aaKnown RBP14.67□□□□□ -0.06
CADM1-212ENST00000542447 MRC2Q9UBG0 1479 aa14.67□□□□□ -0.06
CADM1-212ENST00000542447 FOXD4L5Q5VV16 416 aaPredicted RBP14.66□□□□□ -0.06
CADM1-212ENST00000542447 FOXD4L4Q8WXT5 416 aaPredicted RBP14.66□□□□□ -0.06
CADM1-212ENST00000542447 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
CADM1-212ENST00000542447 TRAK2O60296 914 aa14.66□□□□□ -0.06
CADM1-212ENST00000542447 TMF1P82094 1093 aa14.65□□□□□ -0.06
CADM1-212ENST00000542447 NUP155O75694 1391 aa14.65□□□□□ -0.06
CADM1-212ENST00000542447 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.077e-6■■□□□ 13.1
CADM1-212ENST00000542447 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
CADM1-212ENST00000542447 TIAM1Q13009 1591 aa14.63□□□□□ -0.07
CADM1-212ENST00000542447 NAIPQ13075 1403 aa14.62□□□□□ -0.07
CADM1-212ENST00000542447 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
CADM1-212ENST00000542447 APBB1O00213 710 aa14.61□□□□□ -0.07
CADM1-212ENST00000542447 RNF123Q5XPI4 1314 aa14.61□□□□□ -0.07
CADM1-212ENST00000542447 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
CADM1-212ENST00000542447 R3HCC1Q9Y3T6 440 aaKnown RBP14.61□□□□□ -0.07
CADM1-212ENST00000542447 FOXD4L6Q3SYB3 417 aaPredicted RBP14.6□□□□□ -0.07
CADM1-212ENST00000542447 FOXD4L3Q6VB84 417 aaPredicted RBP14.6□□□□□ -0.07
CADM1-212ENST00000542447 MPNDQ8N594 471 aa14.6□□□□□ -0.07
CADM1-212ENST00000542447 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
CADM1-212ENST00000542447 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
CADM1-212ENST00000542447 NCOA1Q15788 1441 aa14.6□□□□□ -0.07
CADM1-212ENST00000542447 ITPRIPQ8IWB1 547 aa14.59□□□□□ -0.07
CADM1-212ENST00000542447 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
CADM1-212ENST00000542447 ESPNB1AK53 854 aa14.59□□□□□ -0.07
CADM1-212ENST00000542447 XRCC6P12956 609 aaKnown RBP eCLIP14.59□□□□□ -0.072e-11■■■■□ 25.4
CADM1-212ENST00000542447 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
CADM1-212ENST00000542447 SEC24BO95487 1268 aa14.58□□□□□ -0.07
CADM1-212ENST00000542447 NBPF1Q3BBV0 1214 aa14.58□□□□□ -0.07
CADM1-212ENST00000542447 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.07
CADM1-212ENST00000542447 BRD4O60885 1362 aaPredicted RBP14.58□□□□□ -0.08
CADM1-212ENST00000542447 RWDD1Q9H446 243 aaPredicted RBP14.58□□□□□ -0.08
CADM1-212ENST00000542447 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
CADM1-212ENST00000542447 U2SURPO15042 1029 aaKnown RBP14.57□□□□□ -0.08
CADM1-212ENST00000542447 C8orf34Q49A92 452 aa14.57□□□□□ -0.08
CADM1-212ENST00000542447 CHMP5Q9NZZ3 219 aa14.57□□□□□ -0.08
CADM1-212ENST00000542447 MCM4P33991 863 aa14.57□□□□□ -0.08
CADM1-212ENST00000542447 MYOM3Q5VTT5 1437 aa14.56□□□□□ -0.08
CADM1-212ENST00000542447 MRE11P49959 708 aa14.56□□□□□ -0.08
CADM1-212ENST00000542447 KIAA1211Q6ZU35 1233 aa14.56□□□□□ -0.08
CADM1-212ENST00000542447 PRDM10Q9NQV6 1147 aa14.56□□□□□ -0.08
CADM1-212ENST00000542447 GRPEL1Q9HAV7 217 aa14.55□□□□□ -0.08
CADM1-212ENST00000542447 NCOA2Q15596 1464 aa14.55□□□□□ -0.08
CADM1-212ENST00000542447 C22orf23Q9BZE7 217 aa14.55□□□□□ -0.08
CADM1-212ENST00000542447 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
CADM1-212ENST00000542447 FGD5Q6ZNL6 1462 aa14.55□□□□□ -0.08
CADM1-212ENST00000542447 CUX1P39880 1505 aa14.54□□□□□ -0.08
CADM1-212ENST00000542447 BCL11BQ9C0K0 894 aaPredicted RBP14.54□□□□□ -0.08
CADM1-212ENST00000542447 ZNF608Q9ULD9 1512 aaPredicted RBP14.54□□□□□ -0.08
CADM1-212ENST00000542447 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
CADM1-212ENST00000542447 IGHDP01880 384 aa14.53□□□□□ -0.08
CADM1-212ENST00000542447 PMFBP1Q8TBY8 1022 aa14.53□□□□□ -0.08
CADM1-212ENST00000542447 DDX11L8A8MPP1 907 aa14.53□□□□□ -0.08
CADM1-212ENST00000542447 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.08
CADM1-212ENST00000542447 TBC1D2Q9BYX2 928 aa14.52□□□□□ -0.08
CADM1-212ENST00000542447 PDZRN3Q9UPQ7 1066 aa14.52□□□□□ -0.08
CADM1-212ENST00000542447 CLCN1P35523 988 aa14.52□□□□□ -0.09
CADM1-212ENST00000542447 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
CADM1-212ENST00000542447 CALD1Q05682 793 aaKnown RBP14.51□□□□□ -0.09
CADM1-212ENST00000542447 SMC4Q9NTJ3 1288 aa14.51□□□□□ -0.09
CADM1-212ENST00000542447 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
CADM1-212ENST00000542447 HNRNPMP52272 730 aaKnown RBP eCLIP14.5□□□□□ -0.093e-7■■■■□ 26.2
CADM1-212ENST00000542447 RNF214Q8ND24 703 aa14.5□□□□□ -0.09
CADM1-212ENST00000542447 CHMP7Q8WUX9 453 aaPredicted RBP14.5□□□□□ -0.09
CADM1-212ENST00000542447 PLEKHD1A6NEE1 506 aa14.5□□□□□ -0.09
CADM1-212ENST00000542447 NASPP49321 788 aaPredicted RBP14.5□□□□□ -0.09
CADM1-212ENST00000542447 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
CADM1-212ENST00000542447 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
CADM1-212ENST00000542447 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.092e-7■■■□□ 18.2
CADM1-212ENST00000542447 LNPKQ9C0E8 428 aa14.49□□□□□ -0.09
CADM1-212ENST00000542447 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
CADM1-212ENST00000542447 MAP3K1Q13233 1512 aa14.49□□□□□ -0.09
CADM1-212ENST00000542447 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
CADM1-212ENST00000542447 ZHX1Q9UKY1 873 aaPredicted RBP14.47□□□□□ -0.09
CADM1-212ENST00000542447 E9PSI1 815 aa14.46□□□□□ -0.09
CADM1-212ENST00000542447 MCTP1Q6DN14 999 aa14.46□□□□□ -0.09
CADM1-212ENST00000542447 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 WDR62O43379 1518 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 CASKIN1Q8WXD9 1431 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 ELL2O00472 640 aaPredicted RBP14.45□□□□□ -0.1
CADM1-212ENST00000542447 PPP2R1AP30153 589 aa14.45□□□□□ -0.1
CADM1-212ENST00000542447 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
CADM1-212ENST00000542447 CAVIN1Q6NZI2 390 aaKnown RBP14.45□□□□□ -0.1
CADM1-212ENST00000542447 TPM2P07951 284 aa14.44□□□□□ -0.1
CADM1-212ENST00000542447 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
CADM1-212ENST00000542447 CDK11BP21127 795 aaKnown RBP14.44□□□□□ -0.1
CADM1-212ENST00000542447 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
CADM1-212ENST00000542447 PDCL3Q9H2J4 239 aa14.44□□□□□ -0.1
CADM1-212ENST00000542447 ANKRD45Q5TZF3 282 aa14.43□□□□□ -0.1
CADM1-212ENST00000542447 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
CADM1-212ENST00000542447 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
CADM1-212ENST00000542447 XPCQ01831 940 aaPredicted RBP14.43□□□□□ -0.1
CADM1-212ENST00000542447 DHX29Q7Z478 1369 aaKnown RBP14.43□□□□□ -0.1
CADM1-212ENST00000542447 TNNQ9UQP3 1299 aa14.41□□□□□ -0.1
CADM1-212ENST00000542447 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms