RNA–Protein interactions for RNA: ENST00000542180.5

SUPT20H-224, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUPT20H, Length 2,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-224ENST00000542180 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
SUPT20H-224ENST00000542180 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 BECN1Q14457 450 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 GRPEL1Q9HAV7 217 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 UACAQ9BZF9 1416 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
SUPT20H-224ENST00000542180 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.92
SUPT20H-224ENST00000542180 TIAM1Q13009 1591 aa9.27□□□□□ -0.92
SUPT20H-224ENST00000542180 LRRC9Q6ZRR7 1453 aa9.27□□□□□ -0.93
SUPT20H-224ENST00000542180 CENPQQ7L2Z9 268 aaPredicted RBP9.27□□□□□ -0.93
SUPT20H-224ENST00000542180 PRXQ9BXM0 1461 aa9.27□□□□□ -0.93
SUPT20H-224ENST00000542180 ANTXR1Q9H6X2 564 aa9.26□□□□□ -0.93
SUPT20H-224ENST00000542180 DHX29Q7Z478 1369 aaKnown RBP9.26□□□□□ -0.93
SUPT20H-224ENST00000542180 TRAK2O60296 914 aa9.25□□□□□ -0.93
SUPT20H-224ENST00000542180 MCM4P33991 863 aa9.25□□□□□ -0.93
SUPT20H-224ENST00000542180 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
SUPT20H-224ENST00000542180 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
SUPT20H-224ENST00000542180 AQRO60306 1485 aaKnown RBP eCLIP9.24□□□□□ -0.938e-6■■■■□ 23.2
SUPT20H-224ENST00000542180 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
SUPT20H-224ENST00000542180 USP19O94966 1318 aa9.24□□□□□ -0.93
SUPT20H-224ENST00000542180 OFD1O75665 1012 aa9.24□□□□□ -0.93
SUPT20H-224ENST00000542180 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
SUPT20H-224ENST00000542180 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
SUPT20H-224ENST00000542180 DMTNQ08495 405 aa9.23□□□□□ -0.93
SUPT20H-224ENST00000542180 IPO4Q8TEX9 1081 aaKnown RBP9.23□□□□□ -0.93
SUPT20H-224ENST00000542180 R3HCC1Q9Y3T6 440 aaKnown RBP9.23□□□□□ -0.93
SUPT20H-224ENST00000542180 SEC24BO95487 1268 aa9.22□□□□□ -0.93
SUPT20H-224ENST00000542180 UTP14CQ5TAP6 766 aaKnown RBP9.22□□□□□ -0.93
SUPT20H-224ENST00000542180 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
SUPT20H-224ENST00000542180 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
SUPT20H-224ENST00000542180 LRPPRCP42704 1394 aaKnown RBP9.21□□□□□ -0.93
SUPT20H-224ENST00000542180 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.93
SUPT20H-224ENST00000542180 NBPF8Q3BBV2 869 aa9.21□□□□□ -0.94
SUPT20H-224ENST00000542180 MYOM3Q5VTT5 1437 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 TERF1P54274 439 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 ANP32BQ92688 251 aaKnown RBP9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 UQCRHLA0A096LP55 91 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 HFM1A2PYH4 1435 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 VGLL3A8MV65 326 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 UQCRHP07919 91 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 TNNT2P45379 298 aaPredicted RBP9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 ZSCAN30Q86W11 494 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 PLCD3Q8N3E9 789 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 ABCA5Q8WWZ7 1642 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 TMEM51Q9NW97 253 aa9.2□□□□□ -0.94
SUPT20H-224ENST00000542180 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
SUPT20H-224ENST00000542180 MSNP26038 577 aaKnown RBP9.19□□□□□ -0.94
SUPT20H-224ENST00000542180 TBC1D2Q9BYX2 928 aa9.19□□□□□ -0.94
SUPT20H-224ENST00000542180 MTERF4Q7Z6M4 381 aaKnown RBP9.19□□□□□ -0.94
SUPT20H-224ENST00000542180 GAS2L3Q86XJ1 694 aa9.19□□□□□ -0.94
SUPT20H-224ENST00000542180 ISY1Q9ULR0 285 aaKnown RBP9.18□□□□□ -0.94
SUPT20H-224ENST00000542180 ATAD2BQ9ULI0 1458 aa9.18□□□□□ -0.94
SUPT20H-224ENST00000542180 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
SUPT20H-224ENST00000542180 PTPN23Q9H3S7 1636 aa9.18□□□□□ -0.94
SUPT20H-224ENST00000542180 PTPRKQ15262 1439 aa9.17□□□□□ -0.94
SUPT20H-224ENST00000542180 ZNF830Q96NB3 372 aaPredicted RBP9.17□□□□□ -0.94
SUPT20H-224ENST00000542180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
SUPT20H-224ENST00000542180 NAIPQ13075 1403 aa9.16□□□□□ -0.94
SUPT20H-224ENST00000542180 FMN1Q68DA7 1419 aa9.16□□□□□ -0.94
SUPT20H-224ENST00000542180 CCDC94Q9BW85 323 aaPredicted RBP9.16□□□□□ -0.94
SUPT20H-224ENST00000542180 BRD4O60885 1362 aaPredicted RBP9.16□□□□□ -0.94
SUPT20H-224ENST00000542180 CCDC173Q0VFZ6 552 aa9.15□□□□□ -0.94
SUPT20H-224ENST00000542180 MYBBP1AQ9BQG0 1328 aaKnown RBP9.15□□□□□ -0.94
SUPT20H-224ENST00000542180 CHMP5Q9NZZ3 219 aa9.15□□□□□ -0.94
SUPT20H-224ENST00000542180 DDX11L8A8MPP1 907 aa9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 DYNC1I1O14576 645 aa9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 POLA2Q14181 598 aa9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 UPF2Q9HAU5 1272 aaKnown RBP9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 CIZ1Q9ULV3 898 aaPredicted RBP9.14□□□□□ -0.95
SUPT20H-224ENST00000542180 KIF20AO95235 890 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 P3H3Q8IVL6 736 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 RRP7BPQ9NSQ0 103 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 FGD6Q6ZV73 1430 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 PPP1R9BQ96SB3 815 aa9.13□□□□□ -0.95
SUPT20H-224ENST00000542180 NASPP49321 788 aaPredicted RBP9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 CBX1P83916 185 aa9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 HS6ST3Q8IZP7 471 aa9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 GTPBP4Q9BZE4 634 aaKnown RBP9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 KIF15Q9NS87 1388 aa9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 DENND4BO75064 1496 aaPredicted RBP9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 NLRP1Q9C000 1473 aa9.12□□□□□ -0.95
SUPT20H-224ENST00000542180 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
SUPT20H-224ENST00000542180 POLR1AO95602 1720 aaPredicted RBP9.11□□□□□ -0.95
SUPT20H-224ENST00000542180 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
SUPT20H-224ENST00000542180 RALBP1Q15311 655 aa9.11□□□□□ -0.95
SUPT20H-224ENST00000542180 IGHDP01880 384 aa9.1□□□□□ -0.95
SUPT20H-224ENST00000542180 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
SUPT20H-224ENST00000542180 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
SUPT20H-224ENST00000542180 RNF25Q96BH1 459 aaPredicted RBP9.1□□□□□ -0.95
SUPT20H-224ENST00000542180 CDK11BP21127 795 aaKnown RBP9.09□□□□□ -0.95
SUPT20H-224ENST00000542180 FTSJ3Q8IY81 847 aaKnown RBP9.09□□□□□ -0.95
SUPT20H-224ENST00000542180 MIA2Q96PC5 1412 aa9.09□□□□□ -0.95
SUPT20H-224ENST00000542180 ZNF500O60304 480 aaPredicted RBP9.09□□□□□ -0.95
SUPT20H-224ENST00000542180 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms