RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 TNRQ92752 1358 aa17.76■□□□□ 0.43
VTN-203ENST00000542029 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
VTN-203ENST00000542029 PZPP20742 1482 aa17.75■□□□□ 0.43
VTN-203ENST00000542029 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
VTN-203ENST00000542029 CAMSAP1Q5T5Y3 1602 aa17.74■□□□□ 0.43
VTN-203ENST00000542029 FBXO31Q5XUX0 539 aaPredicted RBP17.74■□□□□ 0.43
VTN-203ENST00000542029 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
VTN-203ENST00000542029 NCKAP5LQ9HCH0 1330 aa17.73■□□□□ 0.43
VTN-203ENST00000542029 A2ML1A8K2U0 1454 aa17.73■□□□□ 0.43
VTN-203ENST00000542029 CEP170BQ9Y4F5 1589 aaPredicted RBP17.71■□□□□ 0.43
VTN-203ENST00000542029 THEMISQ8N1K5 641 aaPredicted RBP17.71■□□□□ 0.43
VTN-203ENST00000542029 SHANK2Q9UPX8 1470 aa17.7■□□□□ 0.42
VTN-203ENST00000542029 ABCC5O15440 1437 aa17.7■□□□□ 0.42
VTN-203ENST00000542029 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
VTN-203ENST00000542029 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
VTN-203ENST00000542029 KIF15Q9NS87 1388 aa17.69■□□□□ 0.42
VTN-203ENST00000542029 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
VTN-203ENST00000542029 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
VTN-203ENST00000542029 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
VTN-203ENST00000542029 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
VTN-203ENST00000542029 ANKLE2Q86XL3 938 aa17.67■□□□□ 0.42
VTN-203ENST00000542029 ERBINQ96RT1 1412 aa17.66■□□□□ 0.42
VTN-203ENST00000542029 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
VTN-203ENST00000542029 ANKRD30AQ9BXX3 1397 aa17.66■□□□□ 0.42
VTN-203ENST00000542029 DAPK1P53355 1430 aa17.65■□□□□ 0.42
VTN-203ENST00000542029 IQSEC2Q5JU85 1478 aa17.65■□□□□ 0.42
VTN-203ENST00000542029 ABCC3O15438 1527 aa17.64■□□□□ 0.41
VTN-203ENST00000542029 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
VTN-203ENST00000542029 EIF2AK4Q9P2K8 1649 aaKnown RBP17.64■□□□□ 0.41
VTN-203ENST00000542029 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
VTN-203ENST00000542029 PTPN23Q9H3S7 1636 aa17.63■□□□□ 0.41
VTN-203ENST00000542029 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
VTN-203ENST00000542029 KANK1Q14678 1352 aa17.62■□□□□ 0.41
VTN-203ENST00000542029 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
VTN-203ENST00000542029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.61■□□□□ 0.41
VTN-203ENST00000542029 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
VTN-203ENST00000542029 FAM50AQ14320 339 aaKnown RBP17.6■□□□□ 0.41
VTN-203ENST00000542029 ARHGAP31Q2M1Z3 1444 aa17.6■□□□□ 0.41
VTN-203ENST00000542029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
VTN-203ENST00000542029 UGGT1Q9NYU2 1555 aa17.58■□□□□ 0.41
VTN-203ENST00000542029 ERVK-7P63135 1459 aa17.58■□□□□ 0.41
VTN-203ENST00000542029 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.4
VTN-203ENST00000542029 SPATA31D1Q6ZQQ2 1576 aa17.57■□□□□ 0.4
VTN-203ENST00000542029 PRDM15P57071 1507 aaPredicted RBP17.55■□□□□ 0.4
VTN-203ENST00000542029 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
VTN-203ENST00000542029 MED14O60244 1454 aa17.54■□□□□ 0.4
VTN-203ENST00000542029 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
VTN-203ENST00000542029 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
VTN-203ENST00000542029 UBAP1LF5GYI3 381 aa17.53■□□□□ 0.4
VTN-203ENST00000542029 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
VTN-203ENST00000542029 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
VTN-203ENST00000542029 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
VTN-203ENST00000542029 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
VTN-203ENST00000542029 CPS1P31327 1500 aa17.49■□□□□ 0.39
VTN-203ENST00000542029 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
VTN-203ENST00000542029 TXNDC2Q86VQ3 553 aa17.49■□□□□ 0.39
VTN-203ENST00000542029 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
VTN-203ENST00000542029 NEURL4Q96JN8 1562 aa17.48■□□□□ 0.39
VTN-203ENST00000542029 DEPDC5O75140 1603 aa17.47■□□□□ 0.39
VTN-203ENST00000542029 TOM1O60784 492 aa17.47■□□□□ 0.39
VTN-203ENST00000542029 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
VTN-203ENST00000542029 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
VTN-203ENST00000542029 IDI1Q13907 227 aa17.45■□□□□ 0.38
VTN-203ENST00000542029 TMEM2Q9UHN6 1383 aa17.44■□□□□ 0.38
VTN-203ENST00000542029 LTKP29376 864 aa17.44■□□□□ 0.38
VTN-203ENST00000542029 VWDEQ8N2E2 1590 aa17.44■□□□□ 0.38
VTN-203ENST00000542029 ARHGAP23Q9P227 1491 aa17.44■□□□□ 0.38
VTN-203ENST00000542029 NOS1P29475 1434 aa17.43■□□□□ 0.38
VTN-203ENST00000542029 SLIT1O75093 1534 aa17.42■□□□□ 0.38
VTN-203ENST00000542029 CEP152O94986 1710 aa17.42■□□□□ 0.38
VTN-203ENST00000542029 POLR1AO95602 1720 aaPredicted RBP17.42■□□□□ 0.38
VTN-203ENST00000542029 RPRD2Q5VT52 1461 aaKnown RBP17.42■□□□□ 0.38
VTN-203ENST00000542029 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
VTN-203ENST00000542029 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
VTN-203ENST00000542029 EFCAB6Q5THR3 1501 aa17.38■□□□□ 0.37
VTN-203ENST00000542029 IQGAP1P46940 1657 aa17.37■□□□□ 0.37
VTN-203ENST00000542029 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
VTN-203ENST00000542029 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
VTN-203ENST00000542029 ITGAEP38570 1179 aa17.36■□□□□ 0.37
VTN-203ENST00000542029 PIP4K2BP78356 416 aa17.36■□□□□ 0.37
VTN-203ENST00000542029 PPARGC1BQ86YN6 1023 aaKnown RBP17.34■□□□□ 0.37
VTN-203ENST00000542029 NUP155O75694 1391 aa17.33■□□□□ 0.36
VTN-203ENST00000542029 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
VTN-203ENST00000542029 CFAP65Q6ZU64 1925 aaKnown RBP17.32■□□□□ 0.36
VTN-203ENST00000542029 KCNA6P17658 529 aa17.32■□□□□ 0.36
VTN-203ENST00000542029 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
VTN-203ENST00000542029 HSPA1LP34931 641 aa17.31■□□□□ 0.36
VTN-203ENST00000542029 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.31■□□□□ 0.36
VTN-203ENST00000542029 BCANQ96GW7 911 aa17.31■□□□□ 0.36
VTN-203ENST00000542029 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
VTN-203ENST00000542029 SYNMO15061 1565 aa17.31■□□□□ 0.36
VTN-203ENST00000542029 PPP1R15AO75807 674 aaPredicted RBP17.3■□□□□ 0.36
VTN-203ENST00000542029 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
VTN-203ENST00000542029 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
VTN-203ENST00000542029 TET3O43151 1660 aa17.28■□□□□ 0.36
VTN-203ENST00000542029 RRBP1Q9P2E9 1410 aaKnown RBP17.28■□□□□ 0.36
VTN-203ENST00000542029 UNC13BO14795 1591 aa17.28■□□□□ 0.36
VTN-203ENST00000542029 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
VTN-203ENST00000542029 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
VTN-203ENST00000542029 RIMS2Q9UQ26 1411 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms