RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 DAPK1P53355 1430 aa34.24■■■■□ 3.07
C2CD3-216ENST00000541922 WASHC2CQ9Y4E1 1318 aa34.24■■■■□ 3.07
C2CD3-216ENST00000541922 EIF2AK4Q9P2K8 1649 aaKnown RBP34.22■■■■□ 3.07
C2CD3-216ENST00000541922 DUOX2Q9NRD8 1548 aa34.21■■■■□ 3.07
C2CD3-216ENST00000541922 RNF17Q9BXT8 1623 aaKnown RBP34.2■■■■□ 3.07
C2CD3-216ENST00000541922 STRCQ7RTU9 1775 aa34.2■■■■□ 3.07
C2CD3-216ENST00000541922 KIF15Q9NS87 1388 aa34.18■■■■□ 3.06
C2CD3-216ENST00000541922 MYO3AQ8NEV4 1616 aa34.17■■■■□ 3.06
C2CD3-216ENST00000541922 ILDR1Q86SU0 546 aaPredicted RBP34.16■■■■□ 3.06
C2CD3-216ENST00000541922 RRP7BPQ9NSQ0 103 aa34.16■■■■□ 3.06
C2CD3-216ENST00000541922 DMRT2Q9Y5R5 561 aa34.15■■■■□ 3.06
C2CD3-216ENST00000541922 FAM50AQ14320 339 aaKnown RBP34.14■■■■□ 3.06
C2CD3-216ENST00000541922 PZPP20742 1482 aa34.13■■■■□ 3.05
C2CD3-216ENST00000541922 ZNF142P52746 1687 aaPredicted RBP34.12■■■■□ 3.05
C2CD3-216ENST00000541922 CHIC2Q9UKJ5 165 aa34.11■■■■□ 3.05
C2CD3-216ENST00000541922 ZC3H13Q5T200 1668 aaKnown RBP34.1■■■■□ 3.05
C2CD3-216ENST00000541922 ERBINQ96RT1 1412 aa34.1■■■■□ 3.05
C2CD3-216ENST00000541922 CEP170BQ9Y4F5 1589 aaPredicted RBP34.1■■■■□ 3.05
C2CD3-216ENST00000541922 ANKRD30AQ9BXX3 1397 aa34.1■■■■□ 3.05
C2CD3-216ENST00000541922 FBXO31Q5XUX0 539 aaPredicted RBP34.09■■■■□ 3.05
C2CD3-216ENST00000541922 CAMSAP1Q5T5Y3 1602 aa34.08■■■■□ 3.05
C2CD3-216ENST00000541922 ABCC3O15438 1527 aa34.08■■■■□ 3.05
C2CD3-216ENST00000541922 MROH1Q8NDA8 1641 aa34.08■■■■□ 3.05
C2CD3-216ENST00000541922 NCOA1Q15788 1441 aa34.07■■■■□ 3.04
C2CD3-216ENST00000541922 TNRQ92752 1358 aa34.07■■■■□ 3.04
C2CD3-216ENST00000541922 PTPRTO14522 1441 aa34.03■■■■□ 3.04
C2CD3-216ENST00000541922 A2ML1A8K2U0 1454 aa34.02■■■■□ 3.04
C2CD3-216ENST00000541922 CEP152O94986 1710 aa34.02■■■■□ 3.04
C2CD3-216ENST00000541922 PPARGC1BQ86YN6 1023 aaKnown RBP34■■■■□ 3.03
C2CD3-216ENST00000541922 ADGRL2O95490 1459 aa33.99■■■■□ 3.03
C2CD3-216ENST00000541922 PRDM15P57071 1507 aaPredicted RBP33.99■■■■□ 3.03
C2CD3-216ENST00000541922 PLA2R1Q13018 1463 aa33.97■■■■□ 3.03
C2CD3-216ENST00000541922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.96■■■■□ 3.03
C2CD3-216ENST00000541922 DEPDC5O75140 1603 aa33.95■■■■□ 3.03
C2CD3-216ENST00000541922 FBXO41Q8TF61 875 aa33.95■■■■□ 3.03
C2CD3-216ENST00000541922 NCKAP5LQ9HCH0 1330 aa33.94■■■■□ 3.02
C2CD3-216ENST00000541922 PKD2Q13563 968 aa33.92■■■■□ 3.02
C2CD3-216ENST00000541922 KANK1Q14678 1352 aa33.92■■■■□ 3.02
C2CD3-216ENST00000541922 NLRP1Q9C000 1473 aa33.92■■■■□ 3.02
C2CD3-216ENST00000541922 CFAP65Q6ZU64 1925 aaKnown RBP33.92■■■■□ 3.02
C2CD3-216ENST00000541922 SPATA31D1Q6ZQQ2 1576 aa33.91■■■■□ 3.02
C2CD3-216ENST00000541922 CERKQ8TCT0 537 aa33.91■■■■□ 3.02
C2CD3-216ENST00000541922 ERVK-7P63135 1459 aa33.88■■■■□ 3.01
C2CD3-216ENST00000541922 ARHGAP31Q2M1Z3 1444 aa33.85■■■■□ 3.01
C2CD3-216ENST00000541922 ANKRD50Q9ULJ7 1429 aa33.85■■■■□ 3.01
C2CD3-216ENST00000541922 UGGT1Q9NYU2 1555 aa33.84■■■■□ 3.01
C2CD3-216ENST00000541922 THEMISQ8N1K5 641 aaPredicted RBP33.83■■■■□ 3.01
C2CD3-216ENST00000541922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.8■■■■□ 3
C2CD3-216ENST00000541922 VWDEQ8N2E2 1590 aa33.8■■■■□ 3
C2CD3-216ENST00000541922 POLR1AO95602 1720 aaPredicted RBP33.79■■■■□ 3
C2CD3-216ENST00000541922 LMTK2Q8IWU2 1503 aa33.79■■■■□ 3
C2CD3-216ENST00000541922 ROCK1Q13464 1354 aa33.78■■■■□ 3
C2CD3-216ENST00000541922 ITGAEP38570 1179 aa33.78■■■■□ 3
C2CD3-216ENST00000541922 ANKLE2Q86XL3 938 aa33.74■■■□□ 2.99
C2CD3-216ENST00000541922 LTBP4Q8N2S1 1624 aa33.73■■■□□ 2.99
C2CD3-216ENST00000541922 NEURL4Q96JN8 1562 aa33.7■■■□□ 2.99
C2CD3-216ENST00000541922 EFCAB6Q5THR3 1501 aa33.69■■■□□ 2.98
C2CD3-216ENST00000541922 UBR1Q8IWV7 1749 aa33.68■■■□□ 2.98
C2CD3-216ENST00000541922 ZNF335Q9H4Z2 1342 aaPredicted RBP33.67■■■□□ 2.98
C2CD3-216ENST00000541922 RRBP1Q9P2E9 1410 aaKnown RBP33.67■■■□□ 2.98
C2CD3-216ENST00000541922 UNC13BO14795 1591 aa33.64■■■□□ 2.98
C2CD3-216ENST00000541922 TET3O43151 1660 aa33.61■■■□□ 2.97
C2CD3-216ENST00000541922 NPHP4O75161 1426 aaPredicted RBP33.61■■■□□ 2.97
C2CD3-216ENST00000541922 PIK3C2BO00750 1634 aa33.61■■■□□ 2.97
C2CD3-216ENST00000541922 MED14O60244 1454 aa33.6■■■□□ 2.97
C2CD3-216ENST00000541922 RPRD2Q5VT52 1461 aaKnown RBP33.58■■■□□ 2.97
C2CD3-216ENST00000541922 STAG3Q9UJ98 1225 aa33.58■■■□□ 2.97
C2CD3-216ENST00000541922 NOS1P29475 1434 aa33.58■■■□□ 2.97
C2CD3-216ENST00000541922 SYNMO15061 1565 aa33.58■■■□□ 2.97
C2CD3-216ENST00000541922 IQSEC2Q5JU85 1478 aa33.57■■■□□ 2.97
C2CD3-216ENST00000541922 GCC2Q8IWJ2 1684 aa33.57■■■□□ 2.96
C2CD3-216ENST00000541922 IQGAP1P46940 1657 aa33.55■■■□□ 2.96
C2CD3-216ENST00000541922 IDI1Q13907 227 aa33.55■■■□□ 2.96
C2CD3-216ENST00000541922 SLIT1O75093 1534 aa33.53■■■□□ 2.96
C2CD3-216ENST00000541922 KDM5AP29375 1690 aaKnown RBP33.52■■■□□ 2.96
C2CD3-216ENST00000541922 ARHGAP23Q9P227 1491 aa33.52■■■□□ 2.96
C2CD3-216ENST00000541922 IQGAP3Q86VI3 1631 aa33.52■■■□□ 2.96
C2CD3-216ENST00000541922 SCAF11Q99590 1463 aaKnown RBP33.51■■■□□ 2.96
C2CD3-216ENST00000541922 SLC52A1Q9NWF4 448 aa33.51■■■□□ 2.95
C2CD3-216ENST00000541922 NUP155O75694 1391 aa33.5■■■□□ 2.95
C2CD3-216ENST00000541922 TXNDC2Q86VQ3 553 aa33.5■■■□□ 2.95
C2CD3-216ENST00000541922 EID1Q9Y6B2 187 aa33.49■■■□□ 2.95
C2CD3-216ENST00000541922 LTKP29376 864 aa33.47■■■□□ 2.95
C2CD3-216ENST00000541922 TMEM2Q9UHN6 1383 aa33.47■■■□□ 2.95
C2CD3-216ENST00000541922 E9PCH4 1651 aa33.46■■■□□ 2.95
C2CD3-216ENST00000541922 ADGRB3O60242 1522 aa33.44■■■□□ 2.94
C2CD3-216ENST00000541922 CPS1P31327 1500 aa33.44■■■□□ 2.94
C2CD3-216ENST00000541922 NAIPQ13075 1403 aa33.39■■■□□ 2.94
C2CD3-216ENST00000541922 UBAP1LF5GYI3 381 aa33.34■■■□□ 2.93
C2CD3-216ENST00000541922 MYO5BQ9ULV0 1848 aa33.34■■■□□ 2.93
C2CD3-216ENST00000541922 STRCP1A6NGW2 1772 aa33.31■■■□□ 2.92
C2CD3-216ENST00000541922 TMEM131LA2VDJ0 1609 aa33.31■■■□□ 2.92
C2CD3-216ENST00000541922 HFM1A2PYH4 1435 aa33.3■■■□□ 2.92
C2CD3-216ENST00000541922 CHGAP10645 457 aaKnown RBP33.29■■■□□ 2.92
C2CD3-216ENST00000541922 HDGFP51858 240 aaKnown RBP33.25■■■□□ 2.91
C2CD3-216ENST00000541922 SPHKAPQ2M3C7 1700 aa33.24■■■□□ 2.91
C2CD3-216ENST00000541922 ZFYVE9O95405 1425 aa33.23■■■□□ 2.91
C2CD3-216ENST00000541922 RIMS2Q9UQ26 1411 aa33.23■■■□□ 2.91
C2CD3-216ENST00000541922 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
C2CD3-216ENST00000541922 TRIM52Q96A61 297 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms