RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 UQCRHP07919 91 aa13.81□□□□□ -0.2
ERBB2-204ENST00000541774 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
ERBB2-204ENST00000541774 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
ERBB2-204ENST00000541774 CLCN1P35523 988 aa13.81□□□□□ -0.2
ERBB2-204ENST00000541774 CRBNQ96SW2 442 aa13.81□□□□□ -0.2
ERBB2-204ENST00000541774 NASPP49321 788 aaPredicted RBP13.81□□□□□ -0.2
ERBB2-204ENST00000541774 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
ERBB2-204ENST00000541774 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
ERBB2-204ENST00000541774 MLECQ14165 292 aa13.8□□□□□ -0.2
ERBB2-204ENST00000541774 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
ERBB2-204ENST00000541774 FGD1P98174 961 aa13.8□□□□□ -0.2
ERBB2-204ENST00000541774 TAF7LQ5H9L4 462 aa13.79□□□□□ -0.2
ERBB2-204ENST00000541774 GRPEL1Q9HAV7 217 aa13.79□□□□□ -0.2
ERBB2-204ENST00000541774 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
ERBB2-204ENST00000541774 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
ERBB2-204ENST00000541774 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
ERBB2-204ENST00000541774 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
ERBB2-204ENST00000541774 PKD2Q13563 968 aa13.77□□□□□ -0.21
ERBB2-204ENST00000541774 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
ERBB2-204ENST00000541774 GGT6Q6P531 493 aa13.76□□□□□ -0.21
ERBB2-204ENST00000541774 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
ERBB2-204ENST00000541774 PDE3BQ13370 1112 aa13.76□□□□□ -0.21
ERBB2-204ENST00000541774 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
ERBB2-204ENST00000541774 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
ERBB2-204ENST00000541774 URB2Q14146 1524 aaKnown RBP13.76□□□□□ -0.21
ERBB2-204ENST00000541774 PTPRGP23470 1445 aa13.76□□□□□ -0.21
ERBB2-204ENST00000541774 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
ERBB2-204ENST00000541774 RRAGDQ9NQL2 400 aaPredicted RBP13.75□□□□□ -0.21
ERBB2-204ENST00000541774 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
ERBB2-204ENST00000541774 CBX1P83916 185 aa13.74□□□□□ -0.21
ERBB2-204ENST00000541774 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
ERBB2-204ENST00000541774 MPHOSPH9Q99550 1183 aa13.74□□□□□ -0.21
ERBB2-204ENST00000541774 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-204ENST00000541774 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-204ENST00000541774 DCAF11Q8TEB1 546 aa13.74□□□□□ -0.21
ERBB2-204ENST00000541774 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-204ENST00000541774 CC2D1BQ5T0F9 858 aaKnown RBP13.73□□□□□ -0.21
ERBB2-204ENST00000541774 AAMPQ13685 434 aa13.73□□□□□ -0.21
ERBB2-204ENST00000541774 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
ERBB2-204ENST00000541774 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
ERBB2-204ENST00000541774 E9PSI1 815 aa13.72□□□□□ -0.21
ERBB2-204ENST00000541774 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
ERBB2-204ENST00000541774 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
ERBB2-204ENST00000541774 NRDCO43847 1150 aa13.72□□□□□ -0.21
ERBB2-204ENST00000541774 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
ERBB2-204ENST00000541774 ISY1Q9ULR0 285 aaKnown RBP13.71□□□□□ -0.21
ERBB2-204ENST00000541774 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.21
ERBB2-204ENST00000541774 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
ERBB2-204ENST00000541774 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.22
ERBB2-204ENST00000541774 CASC1Q6TDU7 716 aa13.71□□□□□ -0.22
ERBB2-204ENST00000541774 HMGN5P82970 282 aaKnown RBP13.7□□□□□ -0.22
ERBB2-204ENST00000541774 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
ERBB2-204ENST00000541774 MAPK8IP3Q9UPT6 1336 aa13.7□□□□□ -0.22
ERBB2-204ENST00000541774 SNAPC4Q5SXM2 1469 aa13.7□□□□□ -0.22
ERBB2-204ENST00000541774 MCM4P33991 863 aa13.69□□□□□ -0.22
ERBB2-204ENST00000541774 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
ERBB2-204ENST00000541774 ZRSR1Q15695 479 aaKnown RBP13.69□□□□□ -0.22
ERBB2-204ENST00000541774 NUP155O75694 1391 aa13.68□□□□□ -0.22
ERBB2-204ENST00000541774 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
ERBB2-204ENST00000541774 CCDC39Q9UFE4 941 aa13.67□□□□□ -0.22
ERBB2-204ENST00000541774 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
ERBB2-204ENST00000541774 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
ERBB2-204ENST00000541774 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
ERBB2-204ENST00000541774 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
ERBB2-204ENST00000541774 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
ERBB2-204ENST00000541774 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
ERBB2-204ENST00000541774 KIF3BO15066 747 aa13.66□□□□□ -0.22
ERBB2-204ENST00000541774 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
ERBB2-204ENST00000541774 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 VGLL3A8MV65 326 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 LRRC9Q6ZRR7 1453 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
ERBB2-204ENST00000541774 NUTM2DQ5VT03 806 aaPredicted RBP13.65□□□□□ -0.22
ERBB2-204ENST00000541774 GOLGA6L4A6NEF3 574 aa13.64□□□□□ -0.23
ERBB2-204ENST00000541774 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
ERBB2-204ENST00000541774 FOXD4L5Q5VV16 416 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-204ENST00000541774 FOXD4L4Q8WXT5 416 aaPredicted RBP13.64□□□□□ -0.23
ERBB2-204ENST00000541774 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
ERBB2-204ENST00000541774 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-204ENST00000541774 RALBP1Q15311 655 aa13.63□□□□□ -0.23
ERBB2-204ENST00000541774 RNF214Q8ND24 703 aa13.63□□□□□ -0.23
ERBB2-204ENST00000541774 KCNJ4P48050 445 aa13.63□□□□□ -0.23
ERBB2-204ENST00000541774 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
ERBB2-204ENST00000541774 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
ERBB2-204ENST00000541774 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-204ENST00000541774 SMAP1Q8IYB5 467 aaPredicted RBP13.63□□□□□ -0.23
ERBB2-204ENST00000541774 PHF14O94880 888 aa13.62□□□□□ -0.23
ERBB2-204ENST00000541774 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
ERBB2-204ENST00000541774 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERBB2-204ENST00000541774 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 PDCL2Q8N4E4 241 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 ERICH4A6NGS2 130 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 GPS2Q13227 327 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 SKAP1Q86WV1 359 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
ERBB2-204ENST00000541774 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
ERBB2-204ENST00000541774 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
ERBB2-204ENST00000541774 AFAP1Q8N556 730 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms