RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 NCOA1Q15788 1441 aa9.68□□□□□ -0.86
VEGFB-203ENST00000541681 ZMYM3Q14202 1370 aa9.68□□□□□ -0.86
VEGFB-203ENST00000541681 FAM50AQ14320 339 aaKnown RBP9.68□□□□□ -0.86
VEGFB-203ENST00000541681 DMRT2Q9Y5R5 561 aa9.68□□□□□ -0.86
VEGFB-203ENST00000541681 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
VEGFB-203ENST00000541681 CEP170BQ9Y4F5 1589 aaPredicted RBP9.67□□□□□ -0.86
VEGFB-203ENST00000541681 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
VEGFB-203ENST00000541681 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
VEGFB-203ENST00000541681 PTPRTO14522 1441 aa9.65□□□□□ -0.86
VEGFB-203ENST00000541681 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
VEGFB-203ENST00000541681 RAB3GAP2Q9H2M9 1393 aa9.65□□□□□ -0.86
VEGFB-203ENST00000541681 ITGAEP38570 1179 aa9.65□□□□□ -0.86
VEGFB-203ENST00000541681 ARHGEF5Q12774 1597 aa9.65□□□□□ -0.86
VEGFB-203ENST00000541681 RTEL1-TNFRSF6BF6WH68 1400 aa9.65□□□□□ -0.87
VEGFB-203ENST00000541681 KIF3BO15066 747 aa9.64□□□□□ -0.87
VEGFB-203ENST00000541681 DNMT1P26358 1616 aaKnown RBP9.64□□□□□ -0.87
VEGFB-203ENST00000541681 DHX29Q7Z478 1369 aaKnown RBP9.63□□□□□ -0.87
VEGFB-203ENST00000541681 NCKAP5LQ9HCH0 1330 aa9.63□□□□□ -0.87
VEGFB-203ENST00000541681 POLR1AO95602 1720 aaPredicted RBP9.62□□□□□ -0.87
VEGFB-203ENST00000541681 CROCC2H7BZ55 1655 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 LTBP4Q8N2S1 1624 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 TSPY4P0CV99 314 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 TSPY10P0CW01 314 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 HFM1A2PYH4 1435 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 TNRQ92752 1358 aa9.61□□□□□ -0.87
VEGFB-203ENST00000541681 A2ML1A8K2U0 1454 aa9.6□□□□□ -0.87
VEGFB-203ENST00000541681 PZPP20742 1482 aa9.6□□□□□ -0.87
VEGFB-203ENST00000541681 ZNF335Q9H4Z2 1342 aaPredicted RBP9.6□□□□□ -0.87
VEGFB-203ENST00000541681 WASHC2CQ9Y4E1 1318 aa9.6□□□□□ -0.87
VEGFB-203ENST00000541681 CEP152O94986 1710 aa9.6□□□□□ -0.87
VEGFB-203ENST00000541681 MAST1Q9Y2H9 1570 aa9.6□□□□□ -0.87
VEGFB-203ENST00000541681 PHF23Q9BUL5 403 aaPredicted RBP9.6□□□□□ -0.87
VEGFB-203ENST00000541681 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
VEGFB-203ENST00000541681 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
VEGFB-203ENST00000541681 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
VEGFB-203ENST00000541681 ZC3H13Q5T200 1668 aaKnown RBP9.59□□□□□ -0.87
VEGFB-203ENST00000541681 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
VEGFB-203ENST00000541681 FAM135AQ9P2D6 1515 aa9.59□□□□□ -0.87
VEGFB-203ENST00000541681 EIF2AK4Q9P2K8 1649 aaKnown RBP9.59□□□□□ -0.87
VEGFB-203ENST00000541681 ABCC3O15438 1527 aa9.58□□□□□ -0.88
VEGFB-203ENST00000541681 RSPH4AQ5TD94 716 aa9.58□□□□□ -0.88
VEGFB-203ENST00000541681 PPP6R1Q9UPN7 881 aa9.58□□□□□ -0.88
VEGFB-203ENST00000541681 NAIPQ13075 1403 aa9.57□□□□□ -0.88
VEGFB-203ENST00000541681 PKD2Q13563 968 aa9.57□□□□□ -0.88
VEGFB-203ENST00000541681 MROH1Q8NDA8 1641 aa9.56□□□□□ -0.88
VEGFB-203ENST00000541681 SPATA31D1Q6ZQQ2 1576 aa9.56□□□□□ -0.88
VEGFB-203ENST00000541681 NEURL4Q96JN8 1562 aa9.56□□□□□ -0.88
VEGFB-203ENST00000541681 UGGT1Q9NYU2 1555 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 ROCK1Q13464 1354 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 CFAP65Q6ZU64 1925 aaKnown RBP9.55□□□□□ -0.88
VEGFB-203ENST00000541681 KIF15Q9NS87 1388 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 DAPK1P53355 1430 aa9.55□□□□□ -0.88
VEGFB-203ENST00000541681 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
VEGFB-203ENST00000541681 ERVK-7P63135 1459 aa9.54□□□□□ -0.88
VEGFB-203ENST00000541681 NLRP1Q9C000 1473 aa9.54□□□□□ -0.88
VEGFB-203ENST00000541681 SHANK2Q9UPX8 1470 aa9.54□□□□□ -0.88
VEGFB-203ENST00000541681 UBAP1LF5GYI3 381 aa9.54□□□□□ -0.88
VEGFB-203ENST00000541681 TIMELESSQ9UNS1 1208 aa9.54□□□□□ -0.88
VEGFB-203ENST00000541681 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
VEGFB-203ENST00000541681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.53□□□□□ -0.88
VEGFB-203ENST00000541681 RRP7BPQ9NSQ0 103 aa9.53□□□□□ -0.88
VEGFB-203ENST00000541681 ABCC5O15440 1437 aa9.53□□□□□ -0.88
VEGFB-203ENST00000541681 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.88
VEGFB-203ENST00000541681 IQGAP1P46940 1657 aa9.52□□□□□ -0.89
VEGFB-203ENST00000541681 NPHP4O75161 1426 aaPredicted RBP9.51□□□□□ -0.89
VEGFB-203ENST00000541681 ERBINQ96RT1 1412 aa9.51□□□□□ -0.89
VEGFB-203ENST00000541681 CHIC2Q9UKJ5 165 aa9.51□□□□□ -0.89
VEGFB-203ENST00000541681 ADGRL2O95490 1459 aa9.51□□□□□ -0.89
VEGFB-203ENST00000541681 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
VEGFB-203ENST00000541681 DEPDC5O75140 1603 aa9.5□□□□□ -0.89
VEGFB-203ENST00000541681 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
VEGFB-203ENST00000541681 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
VEGFB-203ENST00000541681 CPS1P31327 1500 aa9.5□□□□□ -0.89
VEGFB-203ENST00000541681 VWDEQ8N2E2 1590 aa9.5□□□□□ -0.89
VEGFB-203ENST00000541681 PIP4K2BP78356 416 aa9.49□□□□□ -0.89
VEGFB-203ENST00000541681 KANK1Q14678 1352 aa9.49□□□□□ -0.89
VEGFB-203ENST00000541681 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
VEGFB-203ENST00000541681 PIK3C2BO00750 1634 aa9.48□□□□□ -0.89
VEGFB-203ENST00000541681 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
VEGFB-203ENST00000541681 SCAF11Q99590 1463 aaKnown RBP9.47□□□□□ -0.89
VEGFB-203ENST00000541681 SYNMO15061 1565 aa9.46□□□□□ -0.89
VEGFB-203ENST00000541681 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
VEGFB-203ENST00000541681 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.9
VEGFB-203ENST00000541681 MED14O60244 1454 aa9.46□□□□□ -0.9
VEGFB-203ENST00000541681 DIEXFQ68CQ4 756 aaKnown RBP9.45□□□□□ -0.9
VEGFB-203ENST00000541681 EFCAB6Q5THR3 1501 aa9.45□□□□□ -0.9
VEGFB-203ENST00000541681 ILDR2Q71H61 639 aa9.44□□□□□ -0.9
VEGFB-203ENST00000541681 ARHGAP31Q2M1Z3 1444 aa9.44□□□□□ -0.9
VEGFB-203ENST00000541681 TOM1O60784 492 aa9.43□□□□□ -0.9
VEGFB-203ENST00000541681 SIN3AQ96ST3 1273 aa9.43□□□□□ -0.9
VEGFB-203ENST00000541681 ADGRB3O60242 1522 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 SLIT1O75093 1534 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 LMTK2Q8IWU2 1503 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 HSPA1LP34931 641 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 TRIM52Q96A61 297 aa9.42□□□□□ -0.9
VEGFB-203ENST00000541681 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms