RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 NCOA2Q15596 1464 aa21.01■□□□□ 0.95
SCARB1-207ENST00000541661 SOCS7O14512 581 aa21■□□□□ 0.95
SCARB1-207ENST00000541661 CAMSAP2Q08AD1 1489 aa21■□□□□ 0.95
SCARB1-207ENST00000541661 KIF3BO15066 747 aa20.99■□□□□ 0.95
SCARB1-207ENST00000541661 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
SCARB1-207ENST00000541661 PZPP20742 1482 aa20.97■□□□□ 0.95
SCARB1-207ENST00000541661 UBAP1LF5GYI3 381 aa20.97■□□□□ 0.95
SCARB1-207ENST00000541661 ARHGEF5Q12774 1597 aa20.97■□□□□ 0.95
SCARB1-207ENST00000541661 TNRQ92752 1358 aa20.97■□□□□ 0.95
SCARB1-207ENST00000541661 POLR1AO95602 1720 aaPredicted RBP20.96■□□□□ 0.95
SCARB1-207ENST00000541661 FBXO31Q5XUX0 539 aaPredicted RBP20.96■□□□□ 0.95
SCARB1-207ENST00000541661 WASHC2CQ9Y4E1 1318 aa20.94■□□□□ 0.94
SCARB1-207ENST00000541661 NEURL4Q96JN8 1562 aa20.93■□□□□ 0.94
SCARB1-207ENST00000541661 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
SCARB1-207ENST00000541661 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
SCARB1-207ENST00000541661 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
SCARB1-207ENST00000541661 NLRP1Q9C000 1473 aa20.9■□□□□ 0.94
SCARB1-207ENST00000541661 THEMISQ8N1K5 641 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-207ENST00000541661 CPS1P31327 1500 aa20.88■□□□□ 0.93
SCARB1-207ENST00000541661 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
SCARB1-207ENST00000541661 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
SCARB1-207ENST00000541661 RNF17Q9BXT8 1623 aaKnown RBP20.87■□□□□ 0.93
SCARB1-207ENST00000541661 ANKLE2Q86XL3 938 aa20.87■□□□□ 0.93
SCARB1-207ENST00000541661 MAST1Q9Y2H9 1570 aa20.87■□□□□ 0.93
SCARB1-207ENST00000541661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
SCARB1-207ENST00000541661 MED14O60244 1454 aa20.86■□□□□ 0.93
SCARB1-207ENST00000541661 DEPDC5O75140 1603 aa20.86■□□□□ 0.93
SCARB1-207ENST00000541661 UGGT1Q9NYU2 1555 aa20.85■□□□□ 0.93
SCARB1-207ENST00000541661 ZC3H13Q5T200 1668 aaKnown RBP20.84■□□□□ 0.93
SCARB1-207ENST00000541661 VPS8Q8N3P4 1428 aa20.84■□□□□ 0.93
SCARB1-207ENST00000541661 VWDEQ8N2E2 1590 aa20.83■□□□□ 0.92
SCARB1-207ENST00000541661 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
SCARB1-207ENST00000541661 ABCC3O15438 1527 aa20.82■□□□□ 0.92
SCARB1-207ENST00000541661 TOM1O60784 492 aa20.81■□□□□ 0.92
SCARB1-207ENST00000541661 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
SCARB1-207ENST00000541661 NPHP4O75161 1426 aaPredicted RBP20.8■□□□□ 0.92
SCARB1-207ENST00000541661 MROH1Q8NDA8 1641 aa20.78■□□□□ 0.92
SCARB1-207ENST00000541661 IQGAP1P46940 1657 aa20.77■□□□□ 0.92
SCARB1-207ENST00000541661 HSPA1LP34931 641 aa20.77■□□□□ 0.92
SCARB1-207ENST00000541661 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
SCARB1-207ENST00000541661 ERVK-7P63135 1459 aa20.76■□□□□ 0.91
SCARB1-207ENST00000541661 PIP4K2BP78356 416 aa20.76■□□□□ 0.91
SCARB1-207ENST00000541661 MYOM3Q5VTT5 1437 aa20.76■□□□□ 0.91
SCARB1-207ENST00000541661 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
SCARB1-207ENST00000541661 DUOX2Q9NRD8 1548 aa20.73■□□□□ 0.91
SCARB1-207ENST00000541661 CEP152O94986 1710 aa20.73■□□□□ 0.91
SCARB1-207ENST00000541661 LOC105371045A0A1W2PR82 267 aa20.73■□□□□ 0.91
SCARB1-207ENST00000541661 ALKQ9UM73 1620 aa20.73■□□□□ 0.91
SCARB1-207ENST00000541661 STRCP1A6NGW2 1772 aa20.72■□□□□ 0.91
SCARB1-207ENST00000541661 UBR1Q8IWV7 1749 aa20.72■□□□□ 0.91
SCARB1-207ENST00000541661 CFAP65Q6ZU64 1925 aaKnown RBP20.71■□□□□ 0.91
SCARB1-207ENST00000541661 MED1Q15648 1581 aaPredicted RBP20.7■□□□□ 0.9
SCARB1-207ENST00000541661 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
SCARB1-207ENST00000541661 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
SCARB1-207ENST00000541661 SYNMO15061 1565 aa20.68■□□□□ 0.9
SCARB1-207ENST00000541661 PRDM15P57071 1507 aaPredicted RBP20.67■□□□□ 0.9
SCARB1-207ENST00000541661 ERBINQ96RT1 1412 aa20.66■□□□□ 0.9
SCARB1-207ENST00000541661 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
SCARB1-207ENST00000541661 CROCC2H7BZ55 1655 aa20.66■□□□□ 0.9
SCARB1-207ENST00000541661 SLIT1O75093 1534 aa20.65■□□□□ 0.9
SCARB1-207ENST00000541661 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
SCARB1-207ENST00000541661 ABCC5O15440 1437 aa20.65■□□□□ 0.9
SCARB1-207ENST00000541661 KIF15Q9NS87 1388 aa20.65■□□□□ 0.9
SCARB1-207ENST00000541661 LTKP29376 864 aa20.62■□□□□ 0.89
SCARB1-207ENST00000541661 PTPN23Q9H3S7 1636 aa20.62■□□□□ 0.89
SCARB1-207ENST00000541661 TXNDC2Q86VQ3 553 aa20.61■□□□□ 0.89
SCARB1-207ENST00000541661 RRP7BPQ9NSQ0 103 aa20.61■□□□□ 0.89
SCARB1-207ENST00000541661 DAPK1P53355 1430 aa20.59■□□□□ 0.89
SCARB1-207ENST00000541661 PIK3C2BO00750 1634 aa20.58■□□□□ 0.89
SCARB1-207ENST00000541661 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
SCARB1-207ENST00000541661 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
SCARB1-207ENST00000541661 XIRP1Q702N8 1843 aaKnown RBP20.57■□□□□ 0.88
SCARB1-207ENST00000541661 LMTK2Q8IWU2 1503 aa20.56■□□□□ 0.88
SCARB1-207ENST00000541661 KANK1Q14678 1352 aa20.56■□□□□ 0.88
SCARB1-207ENST00000541661 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
SCARB1-207ENST00000541661 TMEM2Q9UHN6 1383 aa20.55■□□□□ 0.88
SCARB1-207ENST00000541661 FGD6Q6ZV73 1430 aa20.54■□□□□ 0.88
SCARB1-207ENST00000541661 APLP2Q06481 763 aa20.54■□□□□ 0.88
SCARB1-207ENST00000541661 ANKRD30AQ9BXX3 1397 aa20.52■□□□□ 0.88
SCARB1-207ENST00000541661 IDI1Q13907 227 aa20.51■□□□□ 0.87
SCARB1-207ENST00000541661 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
SCARB1-207ENST00000541661 EFCAB6Q5THR3 1501 aa20.51■□□□□ 0.87
SCARB1-207ENST00000541661 STAG3Q9UJ98 1225 aa20.49■□□□□ 0.87
SCARB1-207ENST00000541661 TET3O43151 1660 aa20.48■□□□□ 0.87
SCARB1-207ENST00000541661 NOS1P29475 1434 aa20.48■□□□□ 0.87
SCARB1-207ENST00000541661 CHIC2Q9UKJ5 165 aa20.48■□□□□ 0.87
SCARB1-207ENST00000541661 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
SCARB1-207ENST00000541661 FAM135BQ49AJ0 1406 aa20.46■□□□□ 0.87
SCARB1-207ENST00000541661 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
SCARB1-207ENST00000541661 KCNA6P17658 529 aa20.45■□□□□ 0.86
SCARB1-207ENST00000541661 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
SCARB1-207ENST00000541661 SLC52A1Q9NWF4 448 aa20.43■□□□□ 0.86
SCARB1-207ENST00000541661 TMEM94Q12767 1356 aa20.43■□□□□ 0.86
SCARB1-207ENST00000541661 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
SCARB1-207ENST00000541661 RPRD2Q5VT52 1461 aaKnown RBP20.4■□□□□ 0.86
SCARB1-207ENST00000541661 RGS17Q9UGC6 210 aaPredicted RBP20.4■□□□□ 0.86
SCARB1-207ENST00000541661 NWD1Q149M9 1564 aa20.39■□□□□ 0.85
SCARB1-207ENST00000541661 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.85
SCARB1-207ENST00000541661 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
SCARB1-207ENST00000541661 ANKRD50Q9ULJ7 1429 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms