RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 DAPK1P53355 1430 aa21.94■■□□□ 1.1
LTBR-209ENST00000541102 KIF15Q9NS87 1388 aa21.92■■□□□ 1.1
LTBR-209ENST00000541102 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
LTBR-209ENST00000541102 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
LTBR-209ENST00000541102 SHANK2Q9UPX8 1470 aa21.9■■□□□ 1.1
LTBR-209ENST00000541102 DNMT1P26358 1616 aaKnown RBP21.9■■□□□ 1.1
LTBR-209ENST00000541102 KDM5DQ9BY66 1539 aa21.9■■□□□ 1.1
LTBR-209ENST00000541102 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
LTBR-209ENST00000541102 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
LTBR-209ENST00000541102 CROCC2H7BZ55 1655 aa21.87■■□□□ 1.09
LTBR-209ENST00000541102 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
LTBR-209ENST00000541102 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.86■■□□□ 1.095e-8■□□□□ 11.3
LTBR-209ENST00000541102 STRCQ7RTU9 1775 aa21.84■■□□□ 1.09
LTBR-209ENST00000541102 FAM135AQ9P2D6 1515 aa21.84■■□□□ 1.09
LTBR-209ENST00000541102 TNRQ92752 1358 aa21.84■■□□□ 1.09
LTBR-209ENST00000541102 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
LTBR-209ENST00000541102 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
LTBR-209ENST00000541102 PZPP20742 1482 aa21.83■■□□□ 1.08
LTBR-209ENST00000541102 MYO3AQ8NEV4 1616 aa21.82■■□□□ 1.08
LTBR-209ENST00000541102 NCKAP5LQ9HCH0 1330 aa21.81■■□□□ 1.08
LTBR-209ENST00000541102 NCOA1Q15788 1441 aa21.81■■□□□ 1.08
LTBR-209ENST00000541102 ERBINQ96RT1 1412 aa21.81■■□□□ 1.08
LTBR-209ENST00000541102 ABCC3O15438 1527 aa21.81■■□□□ 1.08
LTBR-209ENST00000541102 CAMSAP1Q5T5Y3 1602 aa21.81■■□□□ 1.08
LTBR-209ENST00000541102 CEP170BQ9Y4F5 1589 aaPredicted RBP21.79■■□□□ 1.08
LTBR-209ENST00000541102 MROH1Q8NDA8 1641 aa21.78■■□□□ 1.08
LTBR-209ENST00000541102 ITGAEP38570 1179 aa21.78■■□□□ 1.08
LTBR-209ENST00000541102 A2ML1A8K2U0 1454 aa21.77■■□□□ 1.08
LTBR-209ENST00000541102 PTPRTO14522 1441 aa21.77■■□□□ 1.08
LTBR-209ENST00000541102 KANK1Q14678 1352 aa21.75■■□□□ 1.07
LTBR-209ENST00000541102 CERKQ8TCT0 537 aa21.75■■□□□ 1.07
LTBR-209ENST00000541102 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
LTBR-209ENST00000541102 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
LTBR-209ENST00000541102 PKD2Q13563 968 aa21.74■■□□□ 1.07
LTBR-209ENST00000541102 ADGRL2O95490 1459 aa21.74■■□□□ 1.07
LTBR-209ENST00000541102 ZC3H13Q5T200 1668 aaKnown RBP21.74■■□□□ 1.07
LTBR-209ENST00000541102 CEP152O94986 1710 aa21.74■■□□□ 1.07
LTBR-209ENST00000541102 CFAP65Q6ZU64 1925 aaKnown RBP21.72■■□□□ 1.07
LTBR-209ENST00000541102 THEMISQ8N1K5 641 aaPredicted RBP21.71■■□□□ 1.07
LTBR-209ENST00000541102 PLA2R1Q13018 1463 aa21.71■■□□□ 1.07
LTBR-209ENST00000541102 PRDM15P57071 1507 aaPredicted RBP21.7■■□□□ 1.07
LTBR-209ENST00000541102 ANKRD50Q9ULJ7 1429 aa21.7■■□□□ 1.06
LTBR-209ENST00000541102 ERVK-7P63135 1459 aa21.7■■□□□ 1.06
LTBR-209ENST00000541102 NLRP1Q9C000 1473 aa21.69■■□□□ 1.06
LTBR-209ENST00000541102 DEPDC5O75140 1603 aa21.67■■□□□ 1.06
LTBR-209ENST00000541102 SPATA31D1Q6ZQQ2 1576 aa21.67■■□□□ 1.06
LTBR-209ENST00000541102 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.67■■□□□ 1.06
LTBR-209ENST00000541102 ANKLE2Q86XL3 938 aa21.66■■□□□ 1.06
LTBR-209ENST00000541102 ARHGAP31Q2M1Z3 1444 aa21.65■■□□□ 1.06
LTBR-209ENST00000541102 UGGT1Q9NYU2 1555 aa21.65■■□□□ 1.06
LTBR-209ENST00000541102 RRBP1Q9P2E9 1410 aaKnown RBP21.63■■□□□ 1.05
LTBR-209ENST00000541102 ROCK1Q13464 1354 aa21.62■■□□□ 1.05
LTBR-209ENST00000541102 ZNF335Q9H4Z2 1342 aaPredicted RBP21.61■■□□□ 1.05
LTBR-209ENST00000541102 VWDEQ8N2E2 1590 aa21.61■■□□□ 1.05
LTBR-209ENST00000541102 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
LTBR-209ENST00000541102 STAG3Q9UJ98 1225 aa21.58■■□□□ 1.05
LTBR-209ENST00000541102 LTBP4Q8N2S1 1624 aa21.57■■□□□ 1.04
LTBR-209ENST00000541102 IDI1Q13907 227 aa21.56■■□□□ 1.04
LTBR-209ENST00000541102 NEURL4Q96JN8 1562 aa21.54■■□□□ 1.04
LTBR-209ENST00000541102 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
LTBR-209ENST00000541102 EFCAB6Q5THR3 1501 aa21.54■■□□□ 1.04
LTBR-209ENST00000541102 TXNDC2Q86VQ3 553 aa21.53■■□□□ 1.04
LTBR-209ENST00000541102 NPHP4O75161 1426 aaPredicted RBP21.53■■□□□ 1.04
LTBR-209ENST00000541102 NUP155O75694 1391 aa21.52■■□□□ 1.04
LTBR-209ENST00000541102 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.03
LTBR-209ENST00000541102 UNC13BO14795 1591 aa21.5■■□□□ 1.03
LTBR-209ENST00000541102 NOS1P29475 1434 aa21.5■■□□□ 1.03
LTBR-209ENST00000541102 LTKP29376 864 aa21.5■■□□□ 1.03
LTBR-209ENST00000541102 PIK3C2BO00750 1634 aa21.49■■□□□ 1.03
LTBR-209ENST00000541102 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
LTBR-209ENST00000541102 EID1Q9Y6B2 187 aa21.49■■□□□ 1.03
LTBR-209ENST00000541102 MED14O60244 1454 aa21.48■■□□□ 1.03
LTBR-209ENST00000541102 SYNMO15061 1565 aa21.48■■□□□ 1.03
LTBR-209ENST00000541102 TET3O43151 1660 aa21.47■■□□□ 1.03
LTBR-209ENST00000541102 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
LTBR-209ENST00000541102 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.03
LTBR-209ENST00000541102 TMEM2Q9UHN6 1383 aa21.45■■□□□ 1.02
LTBR-209ENST00000541102 ARHGAP23Q9P227 1491 aa21.44■■□□□ 1.02
LTBR-209ENST00000541102 SLIT1O75093 1534 aa21.44■■□□□ 1.02
LTBR-209ENST00000541102 CHGAP10645 457 aaKnown RBP21.43■■□□□ 1.02
LTBR-209ENST00000541102 IQGAP1P46940 1657 aa21.43■■□□□ 1.02
LTBR-209ENST00000541102 GCC2Q8IWJ2 1684 aa21.43■■□□□ 1.02
LTBR-209ENST00000541102 UBAP1LF5GYI3 381 aa21.42■■□□□ 1.02
LTBR-209ENST00000541102 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
LTBR-209ENST00000541102 IQGAP3Q86VI3 1631 aa21.42■■□□□ 1.02
LTBR-209ENST00000541102 NAIPQ13075 1403 aa21.41■■□□□ 1.02
LTBR-209ENST00000541102 E9PCH4 1651 aa21.4■■□□□ 1.02
LTBR-209ENST00000541102 TRIM52Q96A61 297 aa21.39■■□□□ 1.01
LTBR-209ENST00000541102 BCANQ96GW7 911 aa21.39■■□□□ 1.01
LTBR-209ENST00000541102 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
LTBR-209ENST00000541102 ADGRB3O60242 1522 aa21.38■■□□□ 1.01
LTBR-209ENST00000541102 CPS1P31327 1500 aa21.37■■□□□ 1.01
LTBR-209ENST00000541102 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
LTBR-209ENST00000541102 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
LTBR-209ENST00000541102 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
LTBR-209ENST00000541102 HFM1A2PYH4 1435 aa21.33■■□□□ 1.01
LTBR-209ENST00000541102 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
LTBR-209ENST00000541102 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
LTBR-209ENST00000541102 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
LTBR-209ENST00000541102 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms