RNA–Protein interactions for RNA: ENST00000541087.1

MDM1-212, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-212ENST00000541087 RGS17Q9UGC6 210 aaPredicted RBP15.78■□□□□ 0.12
MDM1-212ENST00000541087 DEPDC5O75140 1603 aa15.76■□□□□ 0.11
MDM1-212ENST00000541087 MED14O60244 1454 aa15.76■□□□□ 0.11
MDM1-212ENST00000541087 NPHP4O75161 1426 aaPredicted RBP15.76■□□□□ 0.11
MDM1-212ENST00000541087 RNF17Q9BXT8 1623 aaKnown RBP15.76■□□□□ 0.11
MDM1-212ENST00000541087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.11
MDM1-212ENST00000541087 GPATCH8Q9UKJ3 1502 aaKnown RBP15.75■□□□□ 0.11
MDM1-212ENST00000541087 CASKIN1Q8WXD9 1431 aa15.75■□□□□ 0.11
MDM1-212ENST00000541087 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
MDM1-212ENST00000541087 FBXO31Q5XUX0 539 aaPredicted RBP15.73■□□□□ 0.11
MDM1-212ENST00000541087 SYNMO15061 1565 aa15.73■□□□□ 0.11
MDM1-212ENST00000541087 LRRC7Q96NW7 1537 aa15.73■□□□□ 0.11
MDM1-212ENST00000541087 FAM135AQ9P2D6 1515 aa15.73■□□□□ 0.11
MDM1-212ENST00000541087 IQGAP1P46940 1657 aa15.73■□□□□ 0.11
MDM1-212ENST00000541087 PZPP20742 1482 aa15.72■□□□□ 0.11
MDM1-212ENST00000541087 UGGT1Q9NYU2 1555 aa15.72■□□□□ 0.11
MDM1-212ENST00000541087 CFDP1Q9UEE9 299 aaPredicted RBP15.72■□□□□ 0.11
MDM1-212ENST00000541087 NLRP1Q9C000 1473 aa15.71■□□□□ 0.11
MDM1-212ENST00000541087 STRCP1A6NGW2 1772 aa15.71■□□□□ 0.11
MDM1-212ENST00000541087 MIA2Q96PC5 1412 aa15.69■□□□□ 0.1
MDM1-212ENST00000541087 DHX29Q7Z478 1369 aaKnown RBP15.69■□□□□ 0.1
MDM1-212ENST00000541087 KDM5DQ9BY66 1539 aa15.68■□□□□ 0.1
MDM1-212ENST00000541087 POTEAQ6S8J7 498 aa15.68■□□□□ 0.1
MDM1-212ENST00000541087 CCNB3Q8WWL7 1395 aa15.67■□□□□ 0.1
MDM1-212ENST00000541087 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
MDM1-212ENST00000541087 WASHC2CQ9Y4E1 1318 aa15.67■□□□□ 0.1
MDM1-212ENST00000541087 KIF3BO15066 747 aa15.66■□□□□ 0.1
MDM1-212ENST00000541087 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
MDM1-212ENST00000541087 FAM135BQ49AJ0 1406 aa15.61■□□□□ 0.09
MDM1-212ENST00000541087 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
MDM1-212ENST00000541087 MBD5Q9P267 1494 aa15.6■□□□□ 0.09
MDM1-212ENST00000541087 XIRP1Q702N8 1843 aaKnown RBP15.59■□□□□ 0.09
MDM1-212ENST00000541087 SETD1AO15047 1707 aaKnown RBP15.59■□□□□ 0.09
MDM1-212ENST00000541087 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
MDM1-212ENST00000541087 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
MDM1-212ENST00000541087 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
MDM1-212ENST00000541087 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
MDM1-212ENST00000541087 TIAM1Q13009 1591 aa15.53■□□□□ 0.08
MDM1-212ENST00000541087 CCDC141Q6ZP82 1450 aa15.53■□□□□ 0.08
MDM1-212ENST00000541087 UBR1Q8IWV7 1749 aa15.53■□□□□ 0.08
MDM1-212ENST00000541087 ROBO1Q9Y6N7 1651 aa15.53■□□□□ 0.08
MDM1-212ENST00000541087 CFAP65Q6ZU64 1925 aaKnown RBP15.52■□□□□ 0.07
MDM1-212ENST00000541087 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
MDM1-212ENST00000541087 UPF1Q92900 1129 aaKnown RBP eCLIP15.51■□□□□ 0.07
MDM1-212ENST00000541087 ERVK-7P63135 1459 aa15.51■□□□□ 0.07
MDM1-212ENST00000541087 SLIT1O75093 1534 aa15.49■□□□□ 0.07
MDM1-212ENST00000541087 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
MDM1-212ENST00000541087 LTKP29376 864 aa15.49■□□□□ 0.07
MDM1-212ENST00000541087 EID1Q9Y6B2 187 aa15.49■□□□□ 0.07
MDM1-212ENST00000541087 ABCC3O15438 1527 aa15.48■□□□□ 0.07
MDM1-212ENST00000541087 ARHGAP23Q9P227 1491 aa15.48■□□□□ 0.07
MDM1-212ENST00000541087 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
MDM1-212ENST00000541087 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
MDM1-212ENST00000541087 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
MDM1-212ENST00000541087 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
MDM1-212ENST00000541087 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
MDM1-212ENST00000541087 EHBP1L1Q8N3D4 1523 aa15.47■□□□□ 0.07
MDM1-212ENST00000541087 JCADQ9P266 1359 aa15.47■□□□□ 0.07
MDM1-212ENST00000541087 PHLPP1O60346 1717 aa15.46■□□□□ 0.06
MDM1-212ENST00000541087 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
MDM1-212ENST00000541087 ZNF772Q68DY9 489 aaPredicted RBP15.45■□□□□ 0.06
MDM1-212ENST00000541087 KCNA6P17658 529 aa15.44■□□□□ 0.06
MDM1-212ENST00000541087 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
MDM1-212ENST00000541087 CAMSAP2Q08AD1 1489 aa15.44■□□□□ 0.06
MDM1-212ENST00000541087 ARHGEF5Q12774 1597 aa15.43■□□□□ 0.06
MDM1-212ENST00000541087 EIF2AK4Q9P2K8 1649 aaKnown RBP15.43■□□□□ 0.06
MDM1-212ENST00000541087 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
MDM1-212ENST00000541087 CEP152O94986 1710 aa15.42■□□□□ 0.06
MDM1-212ENST00000541087 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
MDM1-212ENST00000541087 MSH6P52701 1360 aa15.4■□□□□ 0.06
MDM1-212ENST00000541087 MEX3CQ5U5Q3 659 aaKnown RBP15.4■□□□□ 0.06
MDM1-212ENST00000541087 SLAIN2Q9P270 581 aa15.4■□□□□ 0.06
MDM1-212ENST00000541087 SPATA31A6Q5VVP1 1343 aa15.4■□□□□ 0.06
MDM1-212ENST00000541087 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
MDM1-212ENST00000541087 PRDM15P57071 1507 aaPredicted RBP15.39■□□□□ 0.05
MDM1-212ENST00000541087 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
MDM1-212ENST00000541087 SRCAPQ6ZRS2 3230 aa15.39■□□□□ 0.05
MDM1-212ENST00000541087 NKTRP30414 1462 aaKnown RBP15.38■□□□□ 0.05
MDM1-212ENST00000541087 FGD6Q6ZV73 1430 aa15.37■□□□□ 0.05
MDM1-212ENST00000541087 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
MDM1-212ENST00000541087 RXRBP28702 533 aa15.37■□□□□ 0.05
MDM1-212ENST00000541087 PIK3C2BO00750 1634 aa15.36■□□□□ 0.05
MDM1-212ENST00000541087 COL16A1Q07092 1604 aaPredicted RBP15.36■□□□□ 0.05
MDM1-212ENST00000541087 ARHGAP31Q2M1Z3 1444 aa15.36■□□□□ 0.05
MDM1-212ENST00000541087 RBM33Q96EV2 1170 aaKnown RBP15.36■□□□□ 0.05
MDM1-212ENST00000541087 MAST1Q9Y2H9 1570 aa15.36■□□□□ 0.05
MDM1-212ENST00000541087 KDM5AP29375 1690 aaKnown RBP15.35■□□□□ 0.05
MDM1-212ENST00000541087 CDK12Q9NYV4 1490 aaPredicted RBP15.35■□□□□ 0.05
MDM1-212ENST00000541087 NWD1Q149M9 1564 aa15.35■□□□□ 0.05
MDM1-212ENST00000541087 LRP6O75581 1613 aa15.35■□□□□ 0.05
MDM1-212ENST00000541087 TET3O43151 1660 aa15.35■□□□□ 0.05
MDM1-212ENST00000541087 SLC26A8Q96RN1 970 aa15.34■□□□□ 0.05
MDM1-212ENST00000541087 EFCAB6Q5THR3 1501 aa15.33■□□□□ 0.04
MDM1-212ENST00000541087 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
MDM1-212ENST00000541087 DUOX2Q9NRD8 1548 aa15.3■□□□□ 0.04
MDM1-212ENST00000541087 BCANQ96GW7 911 aa15.29■□□□□ 0.04
MDM1-212ENST00000541087 IDI1Q13907 227 aa15.28■□□□□ 0.04
MDM1-212ENST00000541087 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
MDM1-212ENST00000541087 AHDC1Q5TGY3 1603 aaPredicted RBP15.28■□□□□ 0.04
MDM1-212ENST00000541087 NCOA3Q9Y6Q9 1424 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms