RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
LGR5-203ENST00000540815 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
LGR5-203ENST00000540815 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
LGR5-203ENST00000540815 BCORL1Q5H9F3 1711 aa15.66■□□□□ 0.1
LGR5-203ENST00000540815 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
LGR5-203ENST00000540815 PLA2R1Q13018 1463 aa15.64■□□□□ 0.09
LGR5-203ENST00000540815 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
LGR5-203ENST00000540815 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
LGR5-203ENST00000540815 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
LGR5-203ENST00000540815 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
LGR5-203ENST00000540815 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
LGR5-203ENST00000540815 PRKRIP1Q9H875 184 aaPredicted RBP15.61■□□□□ 0.09
LGR5-203ENST00000540815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.099e-7■□□□□ 10.3
LGR5-203ENST00000540815 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
LGR5-203ENST00000540815 ATP10AO60312 1499 aa15.59■□□□□ 0.09
LGR5-203ENST00000540815 ABCA9Q8IUA7 1624 aa15.59■□□□□ 0.09
LGR5-203ENST00000540815 CCDC184Q52MB2 194 aa15.58■□□□□ 0.09
LGR5-203ENST00000540815 TRPM1Q7Z4N2 1603 aa15.58■□□□□ 0.08
LGR5-203ENST00000540815 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
LGR5-203ENST00000540815 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
LGR5-203ENST00000540815 ZFYVE16Q7Z3T8 1539 aa15.58■□□□□ 0.08
LGR5-203ENST00000540815 CARD11Q9BXL7 1154 aa15.58■□□□□ 0.08
LGR5-203ENST00000540815 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
LGR5-203ENST00000540815 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
LGR5-203ENST00000540815 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
LGR5-203ENST00000540815 DHX29Q7Z478 1369 aaKnown RBP15.55■□□□□ 0.08
LGR5-203ENST00000540815 ERICH6Q7L0X2 663 aa15.54■□□□□ 0.08
LGR5-203ENST00000540815 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
LGR5-203ENST00000540815 A2MP01023 1474 aa15.54■□□□□ 0.08
LGR5-203ENST00000540815 LAMC1P11047 1609 aa15.54■□□□□ 0.08
LGR5-203ENST00000540815 DEPDC5O75140 1603 aa15.54■□□□□ 0.08
LGR5-203ENST00000540815 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
LGR5-203ENST00000540815 ASXL2Q76L83 1435 aa15.53■□□□□ 0.08
LGR5-203ENST00000540815 FANCAO15360 1455 aa15.53■□□□□ 0.08
LGR5-203ENST00000540815 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.081e-6■■■■□ 21.8
LGR5-203ENST00000540815 EIF2AK4Q9P2K8 1649 aaKnown RBP15.52■□□□□ 0.08
LGR5-203ENST00000540815 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
LGR5-203ENST00000540815 NEFLP07196 543 aa15.51■□□□□ 0.07
LGR5-203ENST00000540815 E9PCH4 1651 aa15.51■□□□□ 0.07
LGR5-203ENST00000540815 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
LGR5-203ENST00000540815 RGL3Q3MIN7 710 aa15.5■□□□□ 0.07
LGR5-203ENST00000540815 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
LGR5-203ENST00000540815 ST20-MTHFSA0A0A6YYL1 179 aa15.49■□□□□ 0.07
LGR5-203ENST00000540815 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
LGR5-203ENST00000540815 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
LGR5-203ENST00000540815 PRDM15P57071 1507 aaPredicted RBP15.48■□□□□ 0.07
LGR5-203ENST00000540815 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
LGR5-203ENST00000540815 NBR1Q14596 966 aa15.48■□□□□ 0.07
LGR5-203ENST00000540815 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
LGR5-203ENST00000540815 TET3O43151 1660 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 NBPF1Q3BBV0 1214 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 POLR3GLQ9BT43 218 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 TRPM2O94759 1503 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 SCAPERQ9BY12 1400 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 VWDEQ8N2E2 1590 aa15.47■□□□□ 0.07
LGR5-203ENST00000540815 CEP152O94986 1710 aa15.46■□□□□ 0.07
LGR5-203ENST00000540815 RNF17Q9BXT8 1623 aaKnown RBP15.45■□□□□ 0.06
LGR5-203ENST00000540815 PTPRTO14522 1441 aa15.45■□□□□ 0.06
LGR5-203ENST00000540815 FAM9BQ8IZU0 186 aa15.44■□□□□ 0.06
LGR5-203ENST00000540815 MROH1Q8NDA8 1641 aa15.44■□□□□ 0.06
LGR5-203ENST00000540815 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
LGR5-203ENST00000540815 CFAP74Q9C0B2 1584 aa15.42■□□□□ 0.06
LGR5-203ENST00000540815 KANK1Q14678 1352 aa15.42■□□□□ 0.06
LGR5-203ENST00000540815 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
LGR5-203ENST00000540815 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
LGR5-203ENST00000540815 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
LGR5-203ENST00000540815 MADDQ8WXG6 1647 aa15.41■□□□□ 0.06
LGR5-203ENST00000540815 KTN1Q86UP2 1357 aaKnown RBP15.41■□□□□ 0.06
LGR5-203ENST00000540815 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
LGR5-203ENST00000540815 RTN4Q9NQC3 1192 aaKnown RBP15.4■□□□□ 0.06
LGR5-203ENST00000540815 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
LGR5-203ENST00000540815 KIF3BO15066 747 aa15.39■□□□□ 0.05
LGR5-203ENST00000540815 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
LGR5-203ENST00000540815 CNGB1Q14028 1251 aaPredicted RBP15.39■□□□□ 0.05
LGR5-203ENST00000540815 ZNF518AQ6AHZ1 1483 aa15.38■□□□□ 0.05
LGR5-203ENST00000540815 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
LGR5-203ENST00000540815 TESK2Q96S53 571 aa15.37■□□□□ 0.05
LGR5-203ENST00000540815 IQGAP1P46940 1657 aa15.37■□□□□ 0.05
LGR5-203ENST00000540815 RALBP1Q15311 655 aa15.36■□□□□ 0.05
LGR5-203ENST00000540815 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
LGR5-203ENST00000540815 DISP3Q9P2K9 1392 aa15.35■□□□□ 0.05
LGR5-203ENST00000540815 MYT1LQ9UL68 1186 aa15.35■□□□□ 0.05
LGR5-203ENST00000540815 EFCAB6Q5THR3 1501 aa15.34■□□□□ 0.05
LGR5-203ENST00000540815 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
LGR5-203ENST00000540815 LMTK2Q8IWU2 1503 aa15.34■□□□□ 0.05
LGR5-203ENST00000540815 KIAA1210Q9ULL0 1709 aa15.34■□□□□ 0.05
LGR5-203ENST00000540815 UGGT1Q9NYU2 1555 aa15.33■□□□□ 0.05
LGR5-203ENST00000540815 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.05
LGR5-203ENST00000540815 POGZQ7Z3K3 1410 aa15.33■□□□□ 0.05
LGR5-203ENST00000540815 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.04
LGR5-203ENST00000540815 PPRC1Q5VV67 1664 aaKnown RBP15.33■□□□□ 0.04
LGR5-203ENST00000540815 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
LGR5-203ENST00000540815 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
LGR5-203ENST00000540815 KIF1BO60333 1816 aa15.32■□□□□ 0.04
LGR5-203ENST00000540815 MLH3Q9UHC1 1453 aa15.31■□□□□ 0.04
LGR5-203ENST00000540815 TMF1P82094 1093 aa15.31■□□□□ 0.04
LGR5-203ENST00000540815 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
LGR5-203ENST00000540815 HECW2Q9P2P5 1572 aa15.31■□□□□ 0.04
LGR5-203ENST00000540815 TMC1Q8TDI8 760 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms