RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SFI1-229ENST00000540643 DEF6Q9H4E7 631 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 RAPGEF2Q9Y4G8 1499 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
SFI1-229ENST00000540643 BACH2Q9BYV9 841 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
SFI1-229ENST00000540643 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 TIGD1Q96MW7 591 aa16.18■□□□□ 0.18
SFI1-229ENST00000540643 KIF20AO95235 890 aa16.17■□□□□ 0.18
SFI1-229ENST00000540643 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
SFI1-229ENST00000540643 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
SFI1-229ENST00000540643 PDCL2Q8N4E4 241 aa16.17■□□□□ 0.18
SFI1-229ENST00000540643 TSPYL1Q9H0U9 437 aa16.16■□□□□ 0.18
SFI1-229ENST00000540643 XPCQ01831 940 aaPredicted RBP16.16■□□□□ 0.18
SFI1-229ENST00000540643 GTPBP4Q9BZE4 634 aaKnown RBP16.16■□□□□ 0.18
SFI1-229ENST00000540643 HMGN5P82970 282 aaKnown RBP16.15■□□□□ 0.18
SFI1-229ENST00000540643 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
SFI1-229ENST00000540643 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
SFI1-229ENST00000540643 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
SFI1-229ENST00000540643 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
SFI1-229ENST00000540643 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
SFI1-229ENST00000540643 GPS2Q13227 327 aa16.14■□□□□ 0.17
SFI1-229ENST00000540643 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
SFI1-229ENST00000540643 CUX2O14529 1486 aa16.14■□□□□ 0.17
SFI1-229ENST00000540643 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
SFI1-229ENST00000540643 ZNF592Q92610 1267 aa16.13■□□□□ 0.17
SFI1-229ENST00000540643 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
SFI1-229ENST00000540643 BANK1Q8NDB2 785 aa16.13■□□□□ 0.17
SFI1-229ENST00000540643 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.12■□□□□ 0.17
SFI1-229ENST00000540643 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
SFI1-229ENST00000540643 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
SFI1-229ENST00000540643 MPNDQ8N594 471 aa16.12■□□□□ 0.17
SFI1-229ENST00000540643 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
SFI1-229ENST00000540643 DIAPH3Q9NSV4 1193 aa16.1■□□□□ 0.17
SFI1-229ENST00000540643 MFAP1P55081 439 aaKnown RBP16.1■□□□□ 0.17
SFI1-229ENST00000540643 PLCD4Q9BRC7 762 aa16.09■□□□□ 0.17
SFI1-229ENST00000540643 DYNC1I1O14576 645 aa16.08■□□□□ 0.17
SFI1-229ENST00000540643 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
SFI1-229ENST00000540643 CWC15Q9P013 229 aaKnown RBP16.08■□□□□ 0.16
SFI1-229ENST00000540643 AXDND1Q5T1B0 1012 aaPredicted RBP16.08■□□□□ 0.16
SFI1-229ENST00000540643 CCDC94Q9BW85 323 aaPredicted RBP16.08■□□□□ 0.16
SFI1-229ENST00000540643 SOX12O15370 315 aa16.07■□□□□ 0.16
SFI1-229ENST00000540643 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
SFI1-229ENST00000540643 CFTRP13569 1480 aa16.06■□□□□ 0.16
SFI1-229ENST00000540643 TDO2P48775 406 aa16.06■□□□□ 0.16
SFI1-229ENST00000540643 ZBTB9Q96C00 473 aa16.06■□□□□ 0.16
SFI1-229ENST00000540643 HMGXB3Q12766 1538 aa16.06■□□□□ 0.16
SFI1-229ENST00000540643 RSPH4AQ5TD94 716 aa16.06■□□□□ 0.16
SFI1-229ENST00000540643 SASS6Q6UVJ0 657 aa16.05■□□□□ 0.16
SFI1-229ENST00000540643 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
SFI1-229ENST00000540643 PLIN1O60240 522 aa16.05■□□□□ 0.16
SFI1-229ENST00000540643 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
SFI1-229ENST00000540643 TMX1Q9H3N1 280 aa16.04■□□□□ 0.16
SFI1-229ENST00000540643 CCDC39Q9UFE4 941 aa16.04■□□□□ 0.16
SFI1-229ENST00000540643 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
SFI1-229ENST00000540643 NBPF1Q3BBV0 1214 aa16.03■□□□□ 0.16
SFI1-229ENST00000540643 NRDCO43847 1150 aa16.02■□□□□ 0.16
SFI1-229ENST00000540643 MCM4P33991 863 aa16.02■□□□□ 0.16
SFI1-229ENST00000540643 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
SFI1-229ENST00000540643 NPHP1O15259 732 aa16.02■□□□□ 0.15
SFI1-229ENST00000540643 SSR1P43307 286 aaKnown RBP16.02■□□□□ 0.15
SFI1-229ENST00000540643 KANK4Q5T7N3 995 aaPredicted RBP16.02■□□□□ 0.15
SFI1-229ENST00000540643 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.152e-6■□□□□ 9.3
SFI1-229ENST00000540643 NESP48681 1621 aa16■□□□□ 0.15
SFI1-229ENST00000540643 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
SFI1-229ENST00000540643 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
SFI1-229ENST00000540643 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
SFI1-229ENST00000540643 ZNF830Q96NB3 372 aaPredicted RBP16■□□□□ 0.15
SFI1-229ENST00000540643 FANCD2Q9BXW9 1451 aa16■□□□□ 0.15
SFI1-229ENST00000540643 CUX1P39880 1505 aa16■□□□□ 0.15
SFI1-229ENST00000540643 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 TDRD9Q8NDG6 1382 aaKnown RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 FOXD4L5Q5VV16 416 aaPredicted RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 FOXD4L4Q8WXT5 416 aaPredicted RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 SYAP1Q96A49 352 aaPredicted RBP15.99■□□□□ 0.15
SFI1-229ENST00000540643 GTF2F1P35269 517 aaKnown RBP eCLIP15.98■□□□□ 0.15
SFI1-229ENST00000540643 GOLIM4O00461 696 aa15.98■□□□□ 0.15
SFI1-229ENST00000540643 SKIDA1Q1XH10 827 aa15.98■□□□□ 0.15
SFI1-229ENST00000540643 DMTNQ08495 405 aa15.97■□□□□ 0.15
SFI1-229ENST00000540643 RALBP1Q15311 655 aa15.97■□□□□ 0.15
SFI1-229ENST00000540643 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.15
SFI1-229ENST00000540643 OFD1O75665 1012 aa15.96■□□□□ 0.15
SFI1-229ENST00000540643 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.15
SFI1-229ENST00000540643 TOP2BQ02880 1626 aa15.96■□□□□ 0.14
SFI1-229ENST00000540643 ZBTB22O15209 634 aa15.95■□□□□ 0.14
SFI1-229ENST00000540643 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
SFI1-229ENST00000540643 IGF1RP08069 1367 aa15.94■□□□□ 0.14
SFI1-229ENST00000540643 CENPQQ7L2Z9 268 aaPredicted RBP15.94■□□□□ 0.14
SFI1-229ENST00000540643 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
SFI1-229ENST00000540643 ZRSR1Q15695 479 aaKnown RBP15.94■□□□□ 0.14
SFI1-229ENST00000540643 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
SFI1-229ENST00000540643 H0YHG0 523 aa15.93■□□□□ 0.14
SFI1-229ENST00000540643 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
SFI1-229ENST00000540643 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
SFI1-229ENST00000540643 SKAP1Q86WV1 359 aa15.92■□□□□ 0.14
SFI1-229ENST00000540643 ZNF777Q9ULD5 760 aaPredicted RBP15.92■□□□□ 0.14
SFI1-229ENST00000540643 IFT57Q9NWB7 429 aa15.92■□□□□ 0.14
SFI1-229ENST00000540643 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms