RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 MYT1LQ9UL68 1186 aa20.87■□□□□ 0.93
TSFM-207ENST00000540550 DEPDC5O75140 1603 aa20.87■□□□□ 0.93
TSFM-207ENST00000540550 UHRF1BP1Q6BDS2 1440 aa20.86■□□□□ 0.93
TSFM-207ENST00000540550 ZNF326Q5BKZ1 582 aaKnown RBP20.86■□□□□ 0.93
TSFM-207ENST00000540550 POLR1AO95602 1720 aaPredicted RBP20.86■□□□□ 0.93
TSFM-207ENST00000540550 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
TSFM-207ENST00000540550 ZNF518AQ6AHZ1 1483 aa20.84■□□□□ 0.93
TSFM-207ENST00000540550 ANP32CO43423 234 aa20.83■□□□□ 0.93
TSFM-207ENST00000540550 RALGAPBQ86X10 1494 aa20.82■□□□□ 0.92
TSFM-207ENST00000540550 KIDINS220Q9ULH0 1771 aa20.82■□□□□ 0.92
TSFM-207ENST00000540550 PLA2R1Q13018 1463 aa20.82■□□□□ 0.92
TSFM-207ENST00000540550 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
TSFM-207ENST00000540550 ATP10AO60312 1499 aa20.81■□□□□ 0.92
TSFM-207ENST00000540550 SCAF1Q9H7N4 1312 aaKnown RBP20.8■□□□□ 0.92
TSFM-207ENST00000540550 E9PCH4 1651 aa20.8■□□□□ 0.92
TSFM-207ENST00000540550 SPATA31E1Q6ZUB1 1445 aa20.8■□□□□ 0.92
TSFM-207ENST00000540550 TET3O43151 1660 aa20.8■□□□□ 0.92
TSFM-207ENST00000540550 KANK1Q14678 1352 aa20.8■□□□□ 0.92
TSFM-207ENST00000540550 DCAF11Q8TEB1 546 aa20.78■□□□□ 0.92
TSFM-207ENST00000540550 DHX29Q7Z478 1369 aaKnown RBP20.78■□□□□ 0.92
TSFM-207ENST00000540550 POGZQ7Z3K3 1410 aa20.78■□□□□ 0.92
TSFM-207ENST00000540550 KDM5CP41229 1560 aa20.78■□□□□ 0.92
TSFM-207ENST00000540550 KDM2AQ9Y2K7 1162 aa20.77■□□□□ 0.92
TSFM-207ENST00000540550 USP47Q96K76 1375 aa20.77■□□□□ 0.91
TSFM-207ENST00000540550 CCDC7Q96M83 1385 aa20.77■□□□□ 0.91
TSFM-207ENST00000540550 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
TSFM-207ENST00000540550 NEO1Q92859 1461 aa20.75■□□□□ 0.91
TSFM-207ENST00000540550 VWDEQ8N2E2 1590 aa20.75■□□□□ 0.91
TSFM-207ENST00000540550 HECW2Q9P2P5 1572 aa20.75■□□□□ 0.91
TSFM-207ENST00000540550 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
TSFM-207ENST00000540550 CCER2I3L3R5 266 aa20.74■□□□□ 0.91
TSFM-207ENST00000540550 KIF3BO15066 747 aa20.74■□□□□ 0.91
TSFM-207ENST00000540550 CNTLNQ9NXG0 1405 aa20.74■□□□□ 0.91
TSFM-207ENST00000540550 MAP3K4Q9Y6R4 1608 aa20.73■□□□□ 0.91
TSFM-207ENST00000540550 TRPM2O94759 1503 aa20.73■□□□□ 0.91
TSFM-207ENST00000540550 TRPM1Q7Z4N2 1603 aa20.72■□□□□ 0.91
TSFM-207ENST00000540550 MROH1Q8NDA8 1641 aa20.72■□□□□ 0.91
TSFM-207ENST00000540550 A2MP01023 1474 aa20.71■□□□□ 0.91
TSFM-207ENST00000540550 MLH3Q9UHC1 1453 aa20.71■□□□□ 0.91
TSFM-207ENST00000540550 CEP152O94986 1710 aa20.71■□□□□ 0.91
TSFM-207ENST00000540550 RGL3Q3MIN7 710 aa20.7■□□□□ 0.91
TSFM-207ENST00000540550 CARD11Q9BXL7 1154 aa20.7■□□□□ 0.91
TSFM-207ENST00000540550 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
TSFM-207ENST00000540550 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
TSFM-207ENST00000540550 GLI2P10070 1586 aa20.69■□□□□ 0.9
TSFM-207ENST00000540550 RNF17Q9BXT8 1623 aaKnown RBP20.69■□□□□ 0.9
TSFM-207ENST00000540550 KIF7Q2M1P5 1343 aa20.68■□□□□ 0.9
TSFM-207ENST00000540550 BCORL1Q5H9F3 1711 aa20.68■□□□□ 0.9
TSFM-207ENST00000540550 ROCK2O75116 1388 aaKnown RBP20.67■□□□□ 0.9
TSFM-207ENST00000540550 PTPRTO14522 1441 aa20.66■□□□□ 0.9
TSFM-207ENST00000540550 ABCA6Q8N139 1617 aa20.66■□□□□ 0.9
TSFM-207ENST00000540550 CLTCL1P53675 1640 aa20.65■□□□□ 0.9
TSFM-207ENST00000540550 GTF3C3Q9Y5Q9 886 aa20.65■□□□□ 0.9
TSFM-207ENST00000540550 LAMC1P11047 1609 aa20.64■□□□□ 0.89
TSFM-207ENST00000540550 EFCAB6Q5THR3 1501 aa20.64■□□□□ 0.89
TSFM-207ENST00000540550 RICTORQ6R327 1708 aa20.63■□□□□ 0.89
TSFM-207ENST00000540550 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
TSFM-207ENST00000540550 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
TSFM-207ENST00000540550 DIP2BQ9P265 1576 aa20.62■□□□□ 0.89
TSFM-207ENST00000540550 LMTK2Q8IWU2 1503 aa20.62■□□□□ 0.89
TSFM-207ENST00000540550 PPRC1Q5VV67 1664 aaKnown RBP20.62■□□□□ 0.89
TSFM-207ENST00000540550 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
TSFM-207ENST00000540550 KIF1BO60333 1816 aa20.58■□□□□ 0.89
TSFM-207ENST00000540550 GPRASP1Q5JY77 1395 aa20.58■□□□□ 0.89
TSFM-207ENST00000540550 RAPGEF3O95398 923 aa20.58■□□□□ 0.88
TSFM-207ENST00000540550 DIP2CQ9Y2E4 1556 aa20.58■□□□□ 0.88
TSFM-207ENST00000540550 MADDQ8WXG6 1647 aa20.57■□□□□ 0.88
TSFM-207ENST00000540550 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
TSFM-207ENST00000540550 POLR3GLQ9BT43 218 aa20.57■□□□□ 0.88
TSFM-207ENST00000540550 ST20-MTHFSA0A0A6YYL1 179 aa20.56■□□□□ 0.88
TSFM-207ENST00000540550 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
TSFM-207ENST00000540550 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
TSFM-207ENST00000540550 NBPF1Q3BBV0 1214 aa20.53■□□□□ 0.88
TSFM-207ENST00000540550 GGT6Q6P531 493 aa20.52■□□□□ 0.88
TSFM-207ENST00000540550 ABCC3O15438 1527 aa20.51■□□□□ 0.87
TSFM-207ENST00000540550 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
TSFM-207ENST00000540550 CAMSAP1Q5T5Y3 1602 aa20.5■□□□□ 0.87
TSFM-207ENST00000540550 PRKRIP1Q9H875 184 aaPredicted RBP20.5■□□□□ 0.87
TSFM-207ENST00000540550 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
TSFM-207ENST00000540550 ZC3H13Q5T200 1668 aaKnown RBP20.48■□□□□ 0.87
TSFM-207ENST00000540550 CFAP65Q6ZU64 1925 aaKnown RBP20.48■□□□□ 0.87
TSFM-207ENST00000540550 MROH2AA6NES4 1674 aa20.47■□□□□ 0.87
TSFM-207ENST00000540550 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
TSFM-207ENST00000540550 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
TSFM-207ENST00000540550 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
TSFM-207ENST00000540550 MYT1Q01538 1121 aa20.46■□□□□ 0.87
TSFM-207ENST00000540550 IQGAP1P46940 1657 aa20.46■□□□□ 0.87
TSFM-207ENST00000540550 NPATQ14207 1427 aa20.46■□□□□ 0.87
TSFM-207ENST00000540550 YEATS2Q9ULM3 1422 aa20.45■□□□□ 0.86
TSFM-207ENST00000540550 MYOM2P54296 1465 aa20.45■□□□□ 0.86
TSFM-207ENST00000540550 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
TSFM-207ENST00000540550 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
TSFM-207ENST00000540550 KIF13AQ9H1H9 1805 aa20.41■□□□□ 0.86
TSFM-207ENST00000540550 SIGLEC1Q9BZZ2 1709 aa20.39■□□□□ 0.85
TSFM-207ENST00000540550 SCAF11Q99590 1463 aaKnown RBP20.38■□□□□ 0.85
TSFM-207ENST00000540550 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
TSFM-207ENST00000540550 PPLO60437 1756 aa20.37■□□□□ 0.85
TSFM-207ENST00000540550 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
TSFM-207ENST00000540550 TMF1P82094 1093 aa20.37■□□□□ 0.85
TSFM-207ENST00000540550 TESK2Q96S53 571 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms