RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 VWDEQ8N2E2 1590 aa14.61□□□□□ -0.07
TRAPPC1-202ENST00000540486 NEURL4Q96JN8 1562 aa14.6□□□□□ -0.07
TRAPPC1-202ENST00000540486 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC1-202ENST00000540486 CLTCQ00610 1675 aaKnown RBP14.6□□□□□ -0.07
TRAPPC1-202ENST00000540486 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
TRAPPC1-202ENST00000540486 MED14O60244 1454 aa14.58□□□□□ -0.08
TRAPPC1-202ENST00000540486 ITSN2Q9NZM3 1697 aa14.58□□□□□ -0.08
TRAPPC1-202ENST00000540486 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC1-202ENST00000540486 LRRC7Q96NW7 1537 aa14.57□□□□□ -0.08
TRAPPC1-202ENST00000540486 SAMD9LQ8IVG5 1584 aa14.57□□□□□ -0.08
TRAPPC1-202ENST00000540486 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
TRAPPC1-202ENST00000540486 POLR1AO95602 1720 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC1-202ENST00000540486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
TRAPPC1-202ENST00000540486 TNRQ92752 1358 aa14.56□□□□□ -0.08
TRAPPC1-202ENST00000540486 A2MP01023 1474 aa14.56□□□□□ -0.08
TRAPPC1-202ENST00000540486 UPF1Q92900 1129 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRAPPC1-202ENST00000540486 PREX2Q70Z35 1606 aa14.54□□□□□ -0.08
TRAPPC1-202ENST00000540486 RNF17Q9BXT8 1623 aaKnown RBP14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 PLXNC1O60486 1568 aa14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 HNRNPMP52272 730 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 FBXO31Q5XUX0 539 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC1-202ENST00000540486 EEA1Q15075 1411 aa14.52□□□□□ -0.08
TRAPPC1-202ENST00000540486 DEPDC5O75140 1603 aa14.52□□□□□ -0.09
TRAPPC1-202ENST00000540486 ATP7AQ04656 1500 aa14.5□□□□□ -0.09
TRAPPC1-202ENST00000540486 FAM135AQ9P2D6 1515 aa14.5□□□□□ -0.09
TRAPPC1-202ENST00000540486 KIAA1107Q9UPP5 1409 aa14.49□□□□□ -0.09
TRAPPC1-202ENST00000540486 NLRP1Q9C000 1473 aa14.49□□□□□ -0.09
TRAPPC1-202ENST00000540486 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
TRAPPC1-202ENST00000540486 SYNMO15061 1565 aa14.48□□□□□ -0.09
TRAPPC1-202ENST00000540486 UGGT1Q9NYU2 1555 aa14.47□□□□□ -0.09
TRAPPC1-202ENST00000540486 PZPP20742 1482 aa14.47□□□□□ -0.09
TRAPPC1-202ENST00000540486 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.1
TRAPPC1-202ENST00000540486 PLEKHH2Q8IVE3 1493 aa14.45□□□□□ -0.1
TRAPPC1-202ENST00000540486 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC1-202ENST00000540486 IQGAP1P46940 1657 aa14.45□□□□□ -0.1
TRAPPC1-202ENST00000540486 SRCAPQ6ZRS2 3230 aa14.45□□□□□ -0.1
TRAPPC1-202ENST00000540486 STRCP1A6NGW2 1772 aa14.44□□□□□ -0.1
TRAPPC1-202ENST00000540486 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
TRAPPC1-202ENST00000540486 INO80Q9ULG1 1556 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC1-202ENST00000540486 DHX29Q7Z478 1369 aaKnown RBP14.43□□□□□ -0.1
TRAPPC1-202ENST00000540486 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
TRAPPC1-202ENST00000540486 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
TRAPPC1-202ENST00000540486 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC1-202ENST00000540486 GPATCH8Q9UKJ3 1502 aaKnown RBP14.41□□□□□ -0.1
TRAPPC1-202ENST00000540486 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
TRAPPC1-202ENST00000540486 KIF3BO15066 747 aa14.41□□□□□ -0.1
TRAPPC1-202ENST00000540486 ZNF772Q68DY9 489 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC1-202ENST00000540486 CCDC18Q5T9S5 1454 aa14.41□□□□□ -0.1
TRAPPC1-202ENST00000540486 UBTFP17480 764 aaKnown RBP14.4□□□□□ -0.1
TRAPPC1-202ENST00000540486 KDM5DQ9BY66 1539 aa14.4□□□□□ -0.1
TRAPPC1-202ENST00000540486 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
TRAPPC1-202ENST00000540486 RTEL1-TNFRSF6BF6WH68 1400 aa14.39□□□□□ -0.11
TRAPPC1-202ENST00000540486 JCADQ9P266 1359 aa14.38□□□□□ -0.11
TRAPPC1-202ENST00000540486 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
TRAPPC1-202ENST00000540486 APLP2Q06481 763 aa14.36□□□□□ -0.11
TRAPPC1-202ENST00000540486 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
TRAPPC1-202ENST00000540486 CASKIN1Q8WXD9 1431 aa14.35□□□□□ -0.11
TRAPPC1-202ENST00000540486 RXRBP28702 533 aa14.35□□□□□ -0.11
TRAPPC1-202ENST00000540486 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
TRAPPC1-202ENST00000540486 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
TRAPPC1-202ENST00000540486 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
TRAPPC1-202ENST00000540486 SCAF11Q99590 1463 aaKnown RBP14.33□□□□□ -0.12
TRAPPC1-202ENST00000540486 LTKP29376 864 aa14.33□□□□□ -0.12
TRAPPC1-202ENST00000540486 SPATA31A6Q5VVP1 1343 aa14.33□□□□□ -0.12
TRAPPC1-202ENST00000540486 CCNB3Q8WWL7 1395 aa14.33□□□□□ -0.12
TRAPPC1-202ENST00000540486 ZC3H13Q5T200 1668 aaKnown RBP14.33□□□□□ -0.12
TRAPPC1-202ENST00000540486 LRRC9Q6ZRR7 1453 aa14.32□□□□□ -0.12
TRAPPC1-202ENST00000540486 MEX3CQ5U5Q3 659 aaKnown RBP14.32□□□□□ -0.12
TRAPPC1-202ENST00000540486 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
TRAPPC1-202ENST00000540486 KCNA6P17658 529 aa14.31□□□□□ -0.12
TRAPPC1-202ENST00000540486 EID1Q9Y6B2 187 aa14.31□□□□□ -0.12
TRAPPC1-202ENST00000540486 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC1-202ENST00000540486 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
TRAPPC1-202ENST00000540486 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC1-202ENST00000540486 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC1-202ENST00000540486 SLAIN2Q9P270 581 aa14.3□□□□□ -0.12
TRAPPC1-202ENST00000540486 MBD5Q9P267 1494 aa14.3□□□□□ -0.12
TRAPPC1-202ENST00000540486 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
TRAPPC1-202ENST00000540486 ZNF644Q9H582 1327 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC1-202ENST00000540486 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
TRAPPC1-202ENST00000540486 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.12
TRAPPC1-202ENST00000540486 SLIT1O75093 1534 aa14.25□□□□□ -0.13
TRAPPC1-202ENST00000540486 ZRANB1Q9UGI0 708 aa14.25□□□□□ -0.13
TRAPPC1-202ENST00000540486 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
TRAPPC1-202ENST00000540486 NCOA2Q15596 1464 aa14.25□□□□□ -0.13
TRAPPC1-202ENST00000540486 MSH6P52701 1360 aa14.24□□□□□ -0.13
TRAPPC1-202ENST00000540486 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC1-202ENST00000540486 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
TRAPPC1-202ENST00000540486 LRP6O75581 1613 aa14.23□□□□□ -0.13
TRAPPC1-202ENST00000540486 MAP3K1Q13233 1512 aa14.23□□□□□ -0.13
TRAPPC1-202ENST00000540486 RBM33Q96EV2 1170 aaKnown RBP14.22□□□□□ -0.13
TRAPPC1-202ENST00000540486 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
TRAPPC1-202ENST00000540486 UBR1Q8IWV7 1749 aa14.21□□□□□ -0.13
TRAPPC1-202ENST00000540486 PRDM15P57071 1507 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC1-202ENST00000540486 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
TRAPPC1-202ENST00000540486 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
TRAPPC1-202ENST00000540486 ABCC3O15438 1527 aa14.19□□□□□ -0.14
TRAPPC1-202ENST00000540486 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms