RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 KDM5DQ9BY66 1539 aa20.63■□□□□ 0.89
SEMA4D-223ENST00000540475 EIF2AK4Q9P2K8 1649 aaKnown RBP20.63■□□□□ 0.89
SEMA4D-223ENST00000540475 CAMSAP1Q5T5Y3 1602 aa20.62■□□□□ 0.89
SEMA4D-223ENST00000540475 CEP170BQ9Y4F5 1589 aaPredicted RBP20.62■□□□□ 0.89
SEMA4D-223ENST00000540475 CERKQ8TCT0 537 aa20.61■□□□□ 0.89
SEMA4D-223ENST00000540475 PTPN23Q9H3S7 1636 aa20.6■□□□□ 0.89
SEMA4D-223ENST00000540475 APLP2Q06481 763 aa20.6■□□□□ 0.89
SEMA4D-223ENST00000540475 PZPP20742 1482 aa20.6■□□□□ 0.89
SEMA4D-223ENST00000540475 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
SEMA4D-223ENST00000540475 CROCC2H7BZ55 1655 aa20.6■□□□□ 0.89
SEMA4D-223ENST00000540475 TCOF1Q13428 1488 aaKnown RBP20.58■□□□□ 0.89
SEMA4D-223ENST00000540475 SHANK2Q9UPX8 1470 aa20.58■□□□□ 0.89
SEMA4D-223ENST00000540475 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.88
SEMA4D-223ENST00000540475 ABCC5O15440 1437 aa20.57■□□□□ 0.88
SEMA4D-223ENST00000540475 DNMT1P26358 1616 aaKnown RBP20.56■□□□□ 0.88
SEMA4D-223ENST00000540475 WASHC2CQ9Y4E1 1318 aa20.56■□□□□ 0.88
SEMA4D-223ENST00000540475 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
SEMA4D-223ENST00000540475 MROH1Q8NDA8 1641 aa20.56■□□□□ 0.88
SEMA4D-223ENST00000540475 A2ML1A8K2U0 1454 aa20.56■□□□□ 0.88
SEMA4D-223ENST00000540475 FGD6Q6ZV73 1430 aa20.55■□□□□ 0.88
SEMA4D-223ENST00000540475 LTBP4Q8N2S1 1624 aa20.54■□□□□ 0.88
SEMA4D-223ENST00000540475 ABCC3O15438 1527 aa20.53■□□□□ 0.88
SEMA4D-223ENST00000540475 PKD2Q13563 968 aa20.53■□□□□ 0.88
SEMA4D-223ENST00000540475 FBXO31Q5XUX0 539 aaPredicted RBP20.52■□□□□ 0.88
SEMA4D-223ENST00000540475 DAPK1P53355 1430 aa20.52■□□□□ 0.87
SEMA4D-223ENST00000540475 TNRQ92752 1358 aa20.51■□□□□ 0.87
SEMA4D-223ENST00000540475 ERBINQ96RT1 1412 aa20.49■□□□□ 0.87
SEMA4D-223ENST00000540475 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
SEMA4D-223ENST00000540475 SPATA31D1Q6ZQQ2 1576 aa20.48■□□□□ 0.87
SEMA4D-223ENST00000540475 DEPDC5O75140 1603 aa20.48■□□□□ 0.87
SEMA4D-223ENST00000540475 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
SEMA4D-223ENST00000540475 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
SEMA4D-223ENST00000540475 CEP152O94986 1710 aa20.47■□□□□ 0.87
SEMA4D-223ENST00000540475 IQSEC2Q5JU85 1478 aa20.47■□□□□ 0.87
SEMA4D-223ENST00000540475 PRDM15P57071 1507 aaPredicted RBP20.47■□□□□ 0.87
SEMA4D-223ENST00000540475 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
SEMA4D-223ENST00000540475 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
SEMA4D-223ENST00000540475 CFAP65Q6ZU64 1925 aaKnown RBP20.43■□□□□ 0.86
SEMA4D-223ENST00000540475 NEURL4Q96JN8 1562 aa20.42■□□□□ 0.86
SEMA4D-223ENST00000540475 RRP7BPQ9NSQ0 103 aa20.42■□□□□ 0.86
SEMA4D-223ENST00000540475 ADGRL2O95490 1459 aa20.42■□□□□ 0.86
SEMA4D-223ENST00000540475 ERVK-7P63135 1459 aa20.42■□□□□ 0.86
SEMA4D-223ENST00000540475 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
SEMA4D-223ENST00000540475 UGGT1Q9NYU2 1555 aa20.41■□□□□ 0.86
SEMA4D-223ENST00000540475 THEMISQ8N1K5 641 aaPredicted RBP20.4■□□□□ 0.86
SEMA4D-223ENST00000540475 VWDEQ8N2E2 1590 aa20.39■□□□□ 0.85
SEMA4D-223ENST00000540475 MED14O60244 1454 aa20.38■□□□□ 0.85
SEMA4D-223ENST00000540475 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
SEMA4D-223ENST00000540475 UBR1Q8IWV7 1749 aa20.36■□□□□ 0.85
SEMA4D-223ENST00000540475 ZNF335Q9H4Z2 1342 aaPredicted RBP20.36■□□□□ 0.85
SEMA4D-223ENST00000540475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEMA4D-223ENST00000540475 ANKLE2Q86XL3 938 aa20.35■□□□□ 0.85
SEMA4D-223ENST00000540475 CHIC2Q9UKJ5 165 aa20.34■□□□□ 0.85
SEMA4D-223ENST00000540475 KDM5AP29375 1690 aaKnown RBP20.31■□□□□ 0.84
SEMA4D-223ENST00000540475 KANK1Q14678 1352 aa20.31■□□□□ 0.84
SEMA4D-223ENST00000540475 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
SEMA4D-223ENST00000540475 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
SEMA4D-223ENST00000540475 NPHP4O75161 1426 aaPredicted RBP20.28■□□□□ 0.84
SEMA4D-223ENST00000540475 SLIT1O75093 1534 aa20.28■□□□□ 0.84
SEMA4D-223ENST00000540475 ARHGAP23Q9P227 1491 aa20.28■□□□□ 0.84
SEMA4D-223ENST00000540475 CPS1P31327 1500 aa20.27■□□□□ 0.84
SEMA4D-223ENST00000540475 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.84
SEMA4D-223ENST00000540475 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.83
SEMA4D-223ENST00000540475 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.83
SEMA4D-223ENST00000540475 PIK3C2BO00750 1634 aa20.26■□□□□ 0.83
SEMA4D-223ENST00000540475 ROCK1Q13464 1354 aa20.25■□□□□ 0.83
SEMA4D-223ENST00000540475 NOS1P29475 1434 aa20.25■□□□□ 0.83
SEMA4D-223ENST00000540475 SYNMO15061 1565 aa20.23■□□□□ 0.83
SEMA4D-223ENST00000540475 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
SEMA4D-223ENST00000540475 UNC13BO14795 1591 aa20.22■□□□□ 0.83
SEMA4D-223ENST00000540475 STRCP1A6NGW2 1772 aa20.21■□□□□ 0.83
SEMA4D-223ENST00000540475 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
SEMA4D-223ENST00000540475 TET3O43151 1660 aa20.21■□□□□ 0.83
SEMA4D-223ENST00000540475 GCC2Q8IWJ2 1684 aa20.19■□□□□ 0.82
SEMA4D-223ENST00000540475 LTKP29376 864 aa20.19■□□□□ 0.82
SEMA4D-223ENST00000540475 IDI1Q13907 227 aa20.19■□□□□ 0.82
SEMA4D-223ENST00000540475 TMEM2Q9UHN6 1383 aa20.18■□□□□ 0.82
SEMA4D-223ENST00000540475 SLC52A1Q9NWF4 448 aa20.17■□□□□ 0.82
SEMA4D-223ENST00000540475 UBAP1LF5GYI3 381 aa20.16■□□□□ 0.82
SEMA4D-223ENST00000540475 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
SEMA4D-223ENST00000540475 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
SEMA4D-223ENST00000540475 ADGRB3O60242 1522 aa20.14■□□□□ 0.81
SEMA4D-223ENST00000540475 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
SEMA4D-223ENST00000540475 E9PCH4 1651 aa20.12■□□□□ 0.81
SEMA4D-223ENST00000540475 LRRC7Q96NW7 1537 aa20.12■□□□□ 0.81
SEMA4D-223ENST00000540475 ALKQ9UM73 1620 aa20.11■□□□□ 0.81
SEMA4D-223ENST00000540475 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
SEMA4D-223ENST00000540475 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
SEMA4D-223ENST00000540475 TOM1O60784 492 aa20.09■□□□□ 0.81
SEMA4D-223ENST00000540475 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
SEMA4D-223ENST00000540475 XIRP1Q702N8 1843 aaKnown RBP20.09■□□□□ 0.81
SEMA4D-223ENST00000540475 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
SEMA4D-223ENST00000540475 STAG3Q9UJ98 1225 aa20.08■□□□□ 0.81
SEMA4D-223ENST00000540475 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
SEMA4D-223ENST00000540475 NUP155O75694 1391 aa20.03■□□□□ 0.8
SEMA4D-223ENST00000540475 ITGAEP38570 1179 aa20.02■□□□□ 0.8
SEMA4D-223ENST00000540475 KCNA6P17658 529 aa19.99■□□□□ 0.79
SEMA4D-223ENST00000540475 NWD1Q149M9 1564 aa19.99■□□□□ 0.79
SEMA4D-223ENST00000540475 PLEKHG1Q9ULL1 1385 aa19.98■□□□□ 0.79
SEMA4D-223ENST00000540475 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms