RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 ATP10BO94823 1461 aa11.33□□□□□ -0.6
NECAP1-204ENST00000540083 ACIN1Q9UKV3 1341 aaKnown RBP11.33□□□□□ -0.6
NECAP1-204ENST00000540083 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
NECAP1-204ENST00000540083 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
NECAP1-204ENST00000540083 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
NECAP1-204ENST00000540083 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
NECAP1-204ENST00000540083 VPS8Q8N3P4 1428 aa11.32□□□□□ -0.6
NECAP1-204ENST00000540083 CENPBP07199 599 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-204ENST00000540083 PLCG2P16885 1265 aa11.31□□□□□ -0.6
NECAP1-204ENST00000540083 EPRSP07814 1512 aaKnown RBP11.3□□□□□ -0.6
NECAP1-204ENST00000540083 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
NECAP1-204ENST00000540083 WDR7Q9Y4E6 1490 aa11.3□□□□□ -0.6
NECAP1-204ENST00000540083 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
NECAP1-204ENST00000540083 ERICH6Q7L0X2 663 aa11.29□□□□□ -0.6
NECAP1-204ENST00000540083 ABCC10Q5T3U5 1492 aa11.29□□□□□ -0.6
NECAP1-204ENST00000540083 ARID3CA6NKF2 412 aa11.28□□□□□ -0.6
NECAP1-204ENST00000540083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61
NECAP1-204ENST00000540083 PCF11O94913 1555 aaKnown RBP11.27□□□□□ -0.61
NECAP1-204ENST00000540083 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
NECAP1-204ENST00000540083 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-204ENST00000540083 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 GLI2P10070 1586 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 STK25O00506 426 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 TRIM26Q12899 539 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-204ENST00000540083 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-204ENST00000540083 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 MTUS2Q5JR59 1369 aa11.25□□□□□ -0.61
NECAP1-204ENST00000540083 MAMSTRQ6ZN01 415 aa11.24□□□□□ -0.61
NECAP1-204ENST00000540083 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
NECAP1-204ENST00000540083 TROQ12816 1431 aaPredicted RBP11.24□□□□□ -0.61
NECAP1-204ENST00000540083 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
NECAP1-204ENST00000540083 CDK13Q14004 1512 aaKnown RBP11.23□□□□□ -0.61
NECAP1-204ENST00000540083 DIP2BQ9P265 1576 aa11.22□□□□□ -0.61
NECAP1-204ENST00000540083 TEX14Q8IWB6 1497 aa11.21□□□□□ -0.61
NECAP1-204ENST00000540083 PHLDB1Q86UU1 1377 aa11.21□□□□□ -0.61
NECAP1-204ENST00000540083 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
NECAP1-204ENST00000540083 SOX12O15370 315 aa11.2□□□□□ -0.62
NECAP1-204ENST00000540083 CFAP43Q8NDM7 1665 aa11.2□□□□□ -0.62
NECAP1-204ENST00000540083 KIF14Q15058 1648 aa11.2□□□□□ -0.62
NECAP1-204ENST00000540083 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
NECAP1-204ENST00000540083 SCUBE2Q9NQ36 999 aa11.18□□□□□ -0.62
NECAP1-204ENST00000540083 TIAM1Q13009 1591 aa11.18□□□□□ -0.62
NECAP1-204ENST00000540083 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
NECAP1-204ENST00000540083 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
NECAP1-204ENST00000540083 KIF13AQ9H1H9 1805 aa11.17□□□□□ -0.62
NECAP1-204ENST00000540083 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-204ENST00000540083 MAGI3Q5TCQ9 1506 aa11.17□□□□□ -0.62
NECAP1-204ENST00000540083 EFCAB2Q5VUJ9 269 aa11.16□□□□□ -0.62
NECAP1-204ENST00000540083 L3MBTL3Q96JM7 780 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-204ENST00000540083 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
NECAP1-204ENST00000540083 LRRIQ1Q96JM4 1722 aa11.15□□□□□ -0.62
NECAP1-204ENST00000540083 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.62
NECAP1-204ENST00000540083 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
NECAP1-204ENST00000540083 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
NECAP1-204ENST00000540083 CCNB3Q8WWL7 1395 aa11.15□□□□□ -0.63
NECAP1-204ENST00000540083 ARAP3Q8WWN8 1544 aa11.14□□□□□ -0.63
NECAP1-204ENST00000540083 HS6ST3Q8IZP7 471 aa11.14□□□□□ -0.63
NECAP1-204ENST00000540083 PHF8Q9UPP1 1060 aa11.14□□□□□ -0.63
NECAP1-204ENST00000540083 PLCH2O75038 1416 aa11.14□□□□□ -0.63
NECAP1-204ENST00000540083 CFAP74Q9C0B2 1584 aa11.14□□□□□ -0.63
NECAP1-204ENST00000540083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
NECAP1-204ENST00000540083 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
NECAP1-204ENST00000540083 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
NECAP1-204ENST00000540083 NEO1Q92859 1461 aa11.12□□□□□ -0.63
NECAP1-204ENST00000540083 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
NECAP1-204ENST00000540083 NLRP6P59044 892 aa11.11□□□□□ -0.63
NECAP1-204ENST00000540083 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
NECAP1-204ENST00000540083 MYO5CQ9NQX4 1742 aa11.11□□□□□ -0.63
NECAP1-204ENST00000540083 TSPOAP1O95153 1857 aa11.1□□□□□ -0.63
NECAP1-204ENST00000540083 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
NECAP1-204ENST00000540083 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
NECAP1-204ENST00000540083 FANCAO15360 1455 aa11.1□□□□□ -0.63
NECAP1-204ENST00000540083 NCOA2Q15596 1464 aa11.09□□□□□ -0.63
NECAP1-204ENST00000540083 PLEKHH2Q8IVE3 1493 aa11.09□□□□□ -0.63
NECAP1-204ENST00000540083 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
NECAP1-204ENST00000540083 FBXO22Q8NEZ5 403 aa11.09□□□□□ -0.63
NECAP1-204ENST00000540083 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
NECAP1-204ENST00000540083 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
NECAP1-204ENST00000540083 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-204ENST00000540083 KANK4Q5T7N3 995 aaPredicted RBP11.08□□□□□ -0.64
NECAP1-204ENST00000540083 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
NECAP1-204ENST00000540083 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
NECAP1-204ENST00000540083 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
NECAP1-204ENST00000540083 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
NECAP1-204ENST00000540083 GPATCH8Q9UKJ3 1502 aaKnown RBP11.07□□□□□ -0.64
NECAP1-204ENST00000540083 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
NECAP1-204ENST00000540083 G3V3G9 751 aa11.06□□□□□ -0.64
NECAP1-204ENST00000540083 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
NECAP1-204ENST00000540083 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
NECAP1-204ENST00000540083 PREX2Q70Z35 1606 aa11.06□□□□□ -0.64
NECAP1-204ENST00000540083 C3orf67Q6ZVT6 689 aa11.05□□□□□ -0.64
NECAP1-204ENST00000540083 SLAIN1Q8ND83 568 aa11.05□□□□□ -0.64
NECAP1-204ENST00000540083 ZNF777Q9ULD5 760 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-204ENST00000540083 KDM6BO15054 1643 aa11.05□□□□□ -0.64
NECAP1-204ENST00000540083 DENND4BO75064 1496 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-204ENST00000540083 PPRC1Q5VV67 1664 aaKnown RBP11.04□□□□□ -0.64
NECAP1-204ENST00000540083 MYOM3Q5VTT5 1437 aa11.04□□□□□ -0.64
NECAP1-204ENST00000540083 KIAA1107Q9UPP5 1409 aa11.04□□□□□ -0.64
NECAP1-204ENST00000540083 TMEM121BQ9BXQ6 578 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms