RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-209ENST00000539885 KIF15Q9NS87 1388 aa17.35■□□□□ 0.37
NCAPD2-209ENST00000539885 ERBINQ96RT1 1412 aa17.35■□□□□ 0.37
NCAPD2-209ENST00000539885 KDM5DQ9BY66 1539 aa17.35■□□□□ 0.37
NCAPD2-209ENST00000539885 CEBPAP49715 358 aaPredicted RBP17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 PREX1Q8TCU6 1659 aa17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 RNF17Q9BXT8 1623 aaKnown RBP17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 ANKRD30AQ9BXX3 1397 aa17.34■□□□□ 0.37
NCAPD2-209ENST00000539885 ADGRL2O95490 1459 aa17.33■□□□□ 0.37
NCAPD2-209ENST00000539885 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
NCAPD2-209ENST00000539885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
NCAPD2-209ENST00000539885 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
NCAPD2-209ENST00000539885 CLTCQ00610 1675 aaKnown RBP17.32■□□□□ 0.36
NCAPD2-209ENST00000539885 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
NCAPD2-209ENST00000539885 PTPRKQ15262 1439 aa17.29■□□□□ 0.36
NCAPD2-209ENST00000539885 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
NCAPD2-209ENST00000539885 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
NCAPD2-209ENST00000539885 PZPP20742 1482 aa17.27■□□□□ 0.36
NCAPD2-209ENST00000539885 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.36
NCAPD2-209ENST00000539885 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
NCAPD2-209ENST00000539885 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
NCAPD2-209ENST00000539885 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
NCAPD2-209ENST00000539885 ABCC3O15438 1527 aa17.26■□□□□ 0.35
NCAPD2-209ENST00000539885 ROCK1Q13464 1354 aa17.25■□□□□ 0.35
NCAPD2-209ENST00000539885 CHIC2Q9UKJ5 165 aa17.24■□□□□ 0.35
NCAPD2-209ENST00000539885 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
NCAPD2-209ENST00000539885 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
NCAPD2-209ENST00000539885 HSPA2P54652 639 aa17.23■□□□□ 0.35
NCAPD2-209ENST00000539885 KANK1Q14678 1352 aa17.21■□□□□ 0.35
NCAPD2-209ENST00000539885 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
NCAPD2-209ENST00000539885 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
NCAPD2-209ENST00000539885 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
NCAPD2-209ENST00000539885 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
NCAPD2-209ENST00000539885 TNRQ92752 1358 aa17.19■□□□□ 0.34
NCAPD2-209ENST00000539885 ARHGAP31Q2M1Z3 1444 aa17.19■□□□□ 0.34
NCAPD2-209ENST00000539885 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
NCAPD2-209ENST00000539885 LMTK2Q8IWU2 1503 aa17.18■□□□□ 0.34
NCAPD2-209ENST00000539885 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
NCAPD2-209ENST00000539885 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
NCAPD2-209ENST00000539885 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
NCAPD2-209ENST00000539885 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
NCAPD2-209ENST00000539885 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
NCAPD2-209ENST00000539885 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
NCAPD2-209ENST00000539885 ERVK-7P63135 1459 aa17.15■□□□□ 0.34
NCAPD2-209ENST00000539885 FBXO31Q5XUX0 539 aaPredicted RBP17.14■□□□□ 0.33
NCAPD2-209ENST00000539885 CEP152O94986 1710 aa17.13■□□□□ 0.33
NCAPD2-209ENST00000539885 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
NCAPD2-209ENST00000539885 PTPRTO14522 1441 aa17.12■□□□□ 0.33
NCAPD2-209ENST00000539885 UNC13BO14795 1591 aa17.11■□□□□ 0.33
NCAPD2-209ENST00000539885 EFCAB6Q5THR3 1501 aa17.11■□□□□ 0.33
NCAPD2-209ENST00000539885 ITGAEP38570 1179 aa17.09■□□□□ 0.33
NCAPD2-209ENST00000539885 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
NCAPD2-209ENST00000539885 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
NCAPD2-209ENST00000539885 PKD2Q13563 968 aa17.08■□□□□ 0.32
NCAPD2-209ENST00000539885 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
NCAPD2-209ENST00000539885 TET3O43151 1660 aa17.05■□□□□ 0.32
NCAPD2-209ENST00000539885 THEMISQ8N1K5 641 aaPredicted RBP17.05■□□□□ 0.32
NCAPD2-209ENST00000539885 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
NCAPD2-209ENST00000539885 NOS1P29475 1434 aa17.04■□□□□ 0.32
NCAPD2-209ENST00000539885 IQGAP3Q86VI3 1631 aa17.03■□□□□ 0.32
NCAPD2-209ENST00000539885 NAIPQ13075 1403 aa17.03■□□□□ 0.32
NCAPD2-209ENST00000539885 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.32
NCAPD2-209ENST00000539885 GCC2Q8IWJ2 1684 aa17.01■□□□□ 0.31
NCAPD2-209ENST00000539885 NUP155O75694 1391 aa17■□□□□ 0.31
NCAPD2-209ENST00000539885 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
NCAPD2-209ENST00000539885 SYNMO15061 1565 aa16.98■□□□□ 0.31
NCAPD2-209ENST00000539885 KDM5AP29375 1690 aaKnown RBP16.98■□□□□ 0.31
NCAPD2-209ENST00000539885 ANKLE2Q86XL3 938 aa16.98■□□□□ 0.31
NCAPD2-209ENST00000539885 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
NCAPD2-209ENST00000539885 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
NCAPD2-209ENST00000539885 UBR1Q8IWV7 1749 aa16.97■□□□□ 0.31
NCAPD2-209ENST00000539885 MED14O60244 1454 aa16.97■□□□□ 0.31
NCAPD2-209ENST00000539885 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
NCAPD2-209ENST00000539885 SLIT1O75093 1534 aa16.96■□□□□ 0.31
NCAPD2-209ENST00000539885 ARHGAP23Q9P227 1491 aa16.96■□□□□ 0.31
NCAPD2-209ENST00000539885 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
NCAPD2-209ENST00000539885 ADGRB3O60242 1522 aa16.94■□□□□ 0.3
NCAPD2-209ENST00000539885 IDI1Q13907 227 aa16.93■□□□□ 0.3
NCAPD2-209ENST00000539885 E9PCH4 1651 aa16.93■□□□□ 0.3
NCAPD2-209ENST00000539885 NPHP4O75161 1426 aaPredicted RBP16.93■□□□□ 0.3
NCAPD2-209ENST00000539885 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
NCAPD2-209ENST00000539885 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
NCAPD2-209ENST00000539885 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
NCAPD2-209ENST00000539885 LTBP4Q8N2S1 1624 aa16.91■□□□□ 0.3
NCAPD2-209ENST00000539885 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
NCAPD2-209ENST00000539885 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
NCAPD2-209ENST00000539885 CFAP65Q6ZU64 1925 aaKnown RBP16.89■□□□□ 0.29
NCAPD2-209ENST00000539885 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
NCAPD2-209ENST00000539885 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
NCAPD2-209ENST00000539885 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
NCAPD2-209ENST00000539885 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
NCAPD2-209ENST00000539885 CPS1P31327 1500 aa16.85■□□□□ 0.29
NCAPD2-209ENST00000539885 LTKP29376 864 aa16.84■□□□□ 0.29
NCAPD2-209ENST00000539885 TRIM52Q96A61 297 aa16.84■□□□□ 0.29
NCAPD2-209ENST00000539885 TRPM2O94759 1503 aa16.84■□□□□ 0.29
NCAPD2-209ENST00000539885 TMEM131LA2VDJ0 1609 aa16.84■□□□□ 0.29
NCAPD2-209ENST00000539885 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
NCAPD2-209ENST00000539885 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
NCAPD2-209ENST00000539885 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms