RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 NCOA1Q15788 1441 aa29.73■■■□□ 2.35
TNFRSF1A-212ENST00000539372 ABCC5O15440 1437 aa29.72■■■□□ 2.35
TNFRSF1A-212ENST00000539372 CAMSAP1Q5T5Y3 1602 aa29.72■■■□□ 2.35
TNFRSF1A-212ENST00000539372 FBXO31Q5XUX0 539 aaPredicted RBP29.71■■■□□ 2.35
TNFRSF1A-212ENST00000539372 FAM135AQ9P2D6 1515 aa29.71■■■□□ 2.35
TNFRSF1A-212ENST00000539372 CEP170BQ9Y4F5 1589 aaPredicted RBP29.69■■■□□ 2.34
TNFRSF1A-212ENST00000539372 TCOF1Q13428 1488 aaKnown RBP29.68■■■□□ 2.34
TNFRSF1A-212ENST00000539372 CERKQ8TCT0 537 aa29.68■■■□□ 2.34
TNFRSF1A-212ENST00000539372 ZNF142P52746 1687 aaPredicted RBP29.68■■■□□ 2.34
TNFRSF1A-212ENST00000539372 PTPRTO14522 1441 aa29.68■■■□□ 2.34
TNFRSF1A-212ENST00000539372 PZPP20742 1482 aa29.68■■■□□ 2.34
TNFRSF1A-212ENST00000539372 RNF17Q9BXT8 1623 aaKnown RBP29.67■■■□□ 2.34
TNFRSF1A-212ENST00000539372 CROCC2H7BZ55 1655 aa29.67■■■□□ 2.34
TNFRSF1A-212ENST00000539372 DAPK1P53355 1430 aa29.67■■■□□ 2.34
TNFRSF1A-212ENST00000539372 SHANK2Q9UPX8 1470 aa29.67■■■□□ 2.34
TNFRSF1A-212ENST00000539372 RRP7BPQ9NSQ0 103 aa29.66■■■□□ 2.34
TNFRSF1A-212ENST00000539372 DUOX2Q9NRD8 1548 aa29.66■■■□□ 2.34
TNFRSF1A-212ENST00000539372 KIF15Q9NS87 1388 aa29.65■■■□□ 2.34
TNFRSF1A-212ENST00000539372 EIF2AK4Q9P2K8 1649 aaKnown RBP29.65■■■□□ 2.34
TNFRSF1A-212ENST00000539372 NCKAP5LQ9HCH0 1330 aa29.65■■■□□ 2.34
TNFRSF1A-212ENST00000539372 TNRQ92752 1358 aa29.64■■■□□ 2.34
TNFRSF1A-212ENST00000539372 DNMT1P26358 1616 aaKnown RBP29.64■■■□□ 2.34
TNFRSF1A-212ENST00000539372 A2ML1A8K2U0 1454 aa29.61■■■□□ 2.33
TNFRSF1A-212ENST00000539372 ABCC3O15438 1527 aa29.61■■■□□ 2.33
TNFRSF1A-212ENST00000539372 CHIC2Q9UKJ5 165 aa29.61■■■□□ 2.33
TNFRSF1A-212ENST00000539372 MROH1Q8NDA8 1641 aa29.6■■■□□ 2.33
TNFRSF1A-212ENST00000539372 PLA2R1Q13018 1463 aa29.58■■■□□ 2.33
TNFRSF1A-212ENST00000539372 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
TNFRSF1A-212ENST00000539372 ZC3H13Q5T200 1668 aaKnown RBP29.56■■■□□ 2.32
TNFRSF1A-212ENST00000539372 ERBINQ96RT1 1412 aa29.55■■■□□ 2.32
TNFRSF1A-212ENST00000539372 PKD2Q13563 968 aa29.55■■■□□ 2.32
TNFRSF1A-212ENST00000539372 ANKRD30AQ9BXX3 1397 aa29.53■■■□□ 2.32
TNFRSF1A-212ENST00000539372 CEP152O94986 1710 aa29.52■■■□□ 2.32
TNFRSF1A-212ENST00000539372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.51■■■□□ 2.31
TNFRSF1A-212ENST00000539372 PRDM15P57071 1507 aaPredicted RBP29.48■■■□□ 2.31
TNFRSF1A-212ENST00000539372 NLRP1Q9C000 1473 aa29.48■■■□□ 2.31
TNFRSF1A-212ENST00000539372 LTBP4Q8N2S1 1624 aa29.47■■■□□ 2.31
TNFRSF1A-212ENST00000539372 ERVK-7P63135 1459 aa29.47■■■□□ 2.31
TNFRSF1A-212ENST00000539372 SPATA31D1Q6ZQQ2 1576 aa29.46■■■□□ 2.31
TNFRSF1A-212ENST00000539372 PPARGC1BQ86YN6 1023 aaKnown RBP29.45■■■□□ 2.31
TNFRSF1A-212ENST00000539372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.44■■■□□ 2.3
TNFRSF1A-212ENST00000539372 ZNF335Q9H4Z2 1342 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF1A-212ENST00000539372 UGGT1Q9NYU2 1555 aa29.43■■■□□ 2.3
TNFRSF1A-212ENST00000539372 ADGRL2O95490 1459 aa29.42■■■□□ 2.3
TNFRSF1A-212ENST00000539372 DEPDC5O75140 1603 aa29.42■■■□□ 2.3
TNFRSF1A-212ENST00000539372 THEMISQ8N1K5 641 aaPredicted RBP29.42■■■□□ 2.3
TNFRSF1A-212ENST00000539372 KANK1Q14678 1352 aa29.4■■■□□ 2.3
TNFRSF1A-212ENST00000539372 CFAP65Q6ZU64 1925 aaKnown RBP29.39■■■□□ 2.3
TNFRSF1A-212ENST00000539372 ANKLE2Q86XL3 938 aa29.38■■■□□ 2.29
TNFRSF1A-212ENST00000539372 POLR1AO95602 1720 aaPredicted RBP29.37■■■□□ 2.29
TNFRSF1A-212ENST00000539372 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
TNFRSF1A-212ENST00000539372 ARHGAP31Q2M1Z3 1444 aa29.37■■■□□ 2.29
TNFRSF1A-212ENST00000539372 ANKRD50Q9ULJ7 1429 aa29.32■■■□□ 2.28
TNFRSF1A-212ENST00000539372 VWDEQ8N2E2 1590 aa29.31■■■□□ 2.28
TNFRSF1A-212ENST00000539372 LMTK2Q8IWU2 1503 aa29.3■■■□□ 2.28
TNFRSF1A-212ENST00000539372 IQSEC2Q5JU85 1478 aa29.28■■■□□ 2.28
TNFRSF1A-212ENST00000539372 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
TNFRSF1A-212ENST00000539372 ITGAEP38570 1179 aa29.27■■■□□ 2.28
TNFRSF1A-212ENST00000539372 UBR1Q8IWV7 1749 aa29.26■■■□□ 2.27
TNFRSF1A-212ENST00000539372 MED14O60244 1454 aa29.24■■■□□ 2.27
TNFRSF1A-212ENST00000539372 EFCAB6Q5THR3 1501 aa29.22■■■□□ 2.27
TNFRSF1A-212ENST00000539372 ROCK1Q13464 1354 aa29.21■■■□□ 2.27
TNFRSF1A-212ENST00000539372 IQGAP1P46940 1657 aa29.2■■■□□ 2.26
TNFRSF1A-212ENST00000539372 PIK3C2BO00750 1634 aa29.19■■■□□ 2.26
TNFRSF1A-212ENST00000539372 STAG3Q9UJ98 1225 aa29.18■■■□□ 2.26
TNFRSF1A-212ENST00000539372 IDI1Q13907 227 aa29.17■■■□□ 2.26
TNFRSF1A-212ENST00000539372 SYNMO15061 1565 aa29.17■■■□□ 2.26
TNFRSF1A-212ENST00000539372 SCAF11Q99590 1463 aaKnown RBP29.17■■■□□ 2.26
TNFRSF1A-212ENST00000539372 UBAP1LF5GYI3 381 aa29.16■■■□□ 2.26
TNFRSF1A-212ENST00000539372 LTKP29376 864 aa29.16■■■□□ 2.26
TNFRSF1A-212ENST00000539372 TXNDC2Q86VQ3 553 aa29.16■■■□□ 2.26
TNFRSF1A-212ENST00000539372 NOS1P29475 1434 aa29.16■■■□□ 2.26
TNFRSF1A-212ENST00000539372 ARHGAP23Q9P227 1491 aa29.15■■■□□ 2.26
TNFRSF1A-212ENST00000539372 SLIT1O75093 1534 aa29.15■■■□□ 2.26
TNFRSF1A-212ENST00000539372 CPS1P31327 1500 aa29.14■■■□□ 2.25
TNFRSF1A-212ENST00000539372 UNC13BO14795 1591 aa29.13■■■□□ 2.25
TNFRSF1A-212ENST00000539372 EID1Q9Y6B2 187 aa29.11■■■□□ 2.25
TNFRSF1A-212ENST00000539372 TET3O43151 1660 aa29.11■■■□□ 2.25
TNFRSF1A-212ENST00000539372 TMEM2Q9UHN6 1383 aa29.11■■■□□ 2.25
TNFRSF1A-212ENST00000539372 RPRD2Q5VT52 1461 aaKnown RBP29.1■■■□□ 2.25
TNFRSF1A-212ENST00000539372 SLC52A1Q9NWF4 448 aa29.06■■■□□ 2.24
TNFRSF1A-212ENST00000539372 RRBP1Q9P2E9 1410 aaKnown RBP29.05■■■□□ 2.24
TNFRSF1A-212ENST00000539372 KDM5AP29375 1690 aaKnown RBP29.05■■■□□ 2.24
TNFRSF1A-212ENST00000539372 GCC2Q8IWJ2 1684 aa29.05■■■□□ 2.24
TNFRSF1A-212ENST00000539372 ADGRB3O60242 1522 aa29.04■■■□□ 2.24
TNFRSF1A-212ENST00000539372 NUP155O75694 1391 aa29.03■■■□□ 2.24
TNFRSF1A-212ENST00000539372 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
TNFRSF1A-212ENST00000539372 IQGAP3Q86VI3 1631 aa29.02■■■□□ 2.24
TNFRSF1A-212ENST00000539372 E9PCH4 1651 aa28.99■■■□□ 2.23
TNFRSF1A-212ENST00000539372 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
TNFRSF1A-212ENST00000539372 PIP4K2BP78356 416 aa28.97■■■□□ 2.23
TNFRSF1A-212ENST00000539372 LRRC7Q96NW7 1537 aa28.96■■■□□ 2.23
TNFRSF1A-212ENST00000539372 TOM1O60784 492 aa28.96■■■□□ 2.23
TNFRSF1A-212ENST00000539372 CHGAP10645 457 aaKnown RBP28.93■■■□□ 2.22
TNFRSF1A-212ENST00000539372 SENP3Q9H4L4 574 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF1A-212ENST00000539372 SLC26A8Q96RN1 970 aa28.92■■■□□ 2.22
TNFRSF1A-212ENST00000539372 MYO5BQ9ULV0 1848 aa28.91■■■□□ 2.22
TNFRSF1A-212ENST00000539372 TMEM131LA2VDJ0 1609 aa28.91■■■□□ 2.22
TNFRSF1A-212ENST00000539372 BCANQ96GW7 911 aa28.9■■■□□ 2.22
TNFRSF1A-212ENST00000539372 ZFYVE9O95405 1425 aa28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms