RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 UNC13BO14795 1591 aa12.91□□□□□ -0.34
DDB1-213ENST00000539332 MYT1LQ9UL68 1186 aa12.91□□□□□ -0.34
DDB1-213ENST00000539332 PZPP20742 1482 aa12.9□□□□□ -0.34
DDB1-213ENST00000539332 ABCA6Q8N139 1617 aa12.9□□□□□ -0.34
DDB1-213ENST00000539332 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
DDB1-213ENST00000539332 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
DDB1-213ENST00000539332 MAGI2Q86UL8 1455 aa12.88□□□□□ -0.35
DDB1-213ENST00000539332 YEATS2Q9ULM3 1422 aa12.86□□□□□ -0.35
DDB1-213ENST00000539332 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
DDB1-213ENST00000539332 DHX29Q7Z478 1369 aaKnown RBP12.86□□□□□ -0.35
DDB1-213ENST00000539332 A2MP01023 1474 aa12.85□□□□□ -0.35
DDB1-213ENST00000539332 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
DDB1-213ENST00000539332 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
DDB1-213ENST00000539332 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
DDB1-213ENST00000539332 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
DDB1-213ENST00000539332 MPHOSPH9Q99550 1183 aa12.83□□□□□ -0.36
DDB1-213ENST00000539332 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.36
DDB1-213ENST00000539332 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
DDB1-213ENST00000539332 NUP155O75694 1391 aa12.82□□□□□ -0.36
DDB1-213ENST00000539332 ATP10AO60312 1499 aa12.81□□□□□ -0.36
DDB1-213ENST00000539332 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
DDB1-213ENST00000539332 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
DDB1-213ENST00000539332 KIF3BO15066 747 aa12.8□□□□□ -0.36
DDB1-213ENST00000539332 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
DDB1-213ENST00000539332 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
DDB1-213ENST00000539332 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
DDB1-213ENST00000539332 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
DDB1-213ENST00000539332 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
DDB1-213ENST00000539332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■■■■□ 20.2
DDB1-213ENST00000539332 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
DDB1-213ENST00000539332 PRDM15P57071 1507 aaPredicted RBP12.79□□□□□ -0.36
DDB1-213ENST00000539332 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
DDB1-213ENST00000539332 SIGLEC1Q9BZZ2 1709 aa12.78□□□□□ -0.36
DDB1-213ENST00000539332 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
DDB1-213ENST00000539332 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.37
DDB1-213ENST00000539332 AGLP35573 1532 aa12.76□□□□□ -0.37
DDB1-213ENST00000539332 KANK1Q14678 1352 aa12.74□□□□□ -0.37
DDB1-213ENST00000539332 CEP152O94986 1710 aa12.74□□□□□ -0.37
DDB1-213ENST00000539332 PKD2Q13563 968 aa12.74□□□□□ -0.37
DDB1-213ENST00000539332 TONSLQ96HA7 1378 aa12.74□□□□□ -0.37
DDB1-213ENST00000539332 TET3O43151 1660 aa12.73□□□□□ -0.37
DDB1-213ENST00000539332 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
DDB1-213ENST00000539332 FOXD1Q16676 465 aa12.73□□□□□ -0.37
DDB1-213ENST00000539332 GGT6Q6P531 493 aa12.73□□□□□ -0.37
DDB1-213ENST00000539332 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
DDB1-213ENST00000539332 PPP1R15AO75807 674 aaPredicted RBP12.72□□□□□ -0.37
DDB1-213ENST00000539332 E9PCH4 1651 aa12.72□□□□□ -0.37
DDB1-213ENST00000539332 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.38
DDB1-213ENST00000539332 ABCC3O15438 1527 aa12.7□□□□□ -0.38
DDB1-213ENST00000539332 ZC3H13Q5T200 1668 aaKnown RBP12.7□□□□□ -0.38
DDB1-213ENST00000539332 SPHKAPQ2M3C7 1700 aa12.69□□□□□ -0.38
DDB1-213ENST00000539332 EFCAB6Q5THR3 1501 aa12.69□□□□□ -0.38
DDB1-213ENST00000539332 CFAP65Q6ZU64 1925 aaKnown RBP12.69□□□□□ -0.38
DDB1-213ENST00000539332 ARXQ96QS3 562 aa12.69□□□□□ -0.38
DDB1-213ENST00000539332 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
DDB1-213ENST00000539332 WASHC2CQ9Y4E1 1318 aa12.68□□□□□ -0.38
DDB1-213ENST00000539332 PLA2R1Q13018 1463 aa12.67□□□□□ -0.38
DDB1-213ENST00000539332 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
DDB1-213ENST00000539332 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
DDB1-213ENST00000539332 CLTCQ00610 1675 aaKnown RBP12.65□□□□□ -0.38
DDB1-213ENST00000539332 TRPM2O94759 1503 aa12.65□□□□□ -0.38
DDB1-213ENST00000539332 MLECQ14165 292 aa12.64□□□□□ -0.39
DDB1-213ENST00000539332 NPATQ14207 1427 aa12.64□□□□□ -0.39
DDB1-213ENST00000539332 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
DDB1-213ENST00000539332 PTPRTO14522 1441 aa12.62□□□□□ -0.39
DDB1-213ENST00000539332 ARHGAP31Q2M1Z3 1444 aa12.62□□□□□ -0.39
DDB1-213ENST00000539332 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
DDB1-213ENST00000539332 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
DDB1-213ENST00000539332 DIEXFQ68CQ4 756 aaKnown RBP12.61□□□□□ -0.39
DDB1-213ENST00000539332 CCDC144AA2RUR9 1427 aa12.61□□□□□ -0.39
DDB1-213ENST00000539332 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
DDB1-213ENST00000539332 FER1L4A9Z1Z3 1794 aa12.6□□□□□ -0.39
DDB1-213ENST00000539332 POLR1AO95602 1720 aaPredicted RBP12.6□□□□□ -0.39
DDB1-213ENST00000539332 MROH2AA6NES4 1674 aa12.59□□□□□ -0.39
DDB1-213ENST00000539332 PREX1Q8TCU6 1659 aa12.59□□□□□ -0.39
DDB1-213ENST00000539332 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
DDB1-213ENST00000539332 ESF1Q9H501 851 aaKnown RBP12.58□□□□□ -0.39
DDB1-213ENST00000539332 NOS1P29475 1434 aa12.58□□□□□ -0.4
DDB1-213ENST00000539332 CNTLNQ9NXG0 1405 aa12.58□□□□□ -0.4
DDB1-213ENST00000539332 KIF1BO60333 1816 aa12.57□□□□□ -0.4
DDB1-213ENST00000539332 SYNMO15061 1565 aa12.57□□□□□ -0.4
DDB1-213ENST00000539332 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
DDB1-213ENST00000539332 TRPM1Q7Z4N2 1603 aa12.56□□□□□ -0.4
DDB1-213ENST00000539332 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
DDB1-213ENST00000539332 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
DDB1-213ENST00000539332 IFT172Q9UG01 1749 aa12.56□□□□□ -0.4
DDB1-213ENST00000539332 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
DDB1-213ENST00000539332 PIK3C2BO00750 1634 aa12.55□□□□□ -0.4
DDB1-213ENST00000539332 LAMC1P11047 1609 aa12.55□□□□□ -0.4
DDB1-213ENST00000539332 ERVK-7P63135 1459 aa12.55□□□□□ -0.4
DDB1-213ENST00000539332 ADAMTSL3P82987 1691 aa12.55□□□□□ -0.4
DDB1-213ENST00000539332 NBPF8Q3BBV2 869 aa12.54□□□□□ -0.4
DDB1-213ENST00000539332 FBXO31Q5XUX0 539 aaPredicted RBP12.54□□□□□ -0.4
DDB1-213ENST00000539332 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
DDB1-213ENST00000539332 C3P01024 1663 aa12.54□□□□□ -0.4
DDB1-213ENST00000539332 SPATA31D1Q6ZQQ2 1576 aa12.54□□□□□ -0.4
DDB1-213ENST00000539332 RIMS1Q86UR5 1692 aaKnown RBP12.52□□□□□ -0.41
DDB1-213ENST00000539332 PRAG1Q86YV5 1406 aa12.51□□□□□ -0.41
DDB1-213ENST00000539332 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
DDB1-213ENST00000539332 MYO5BQ9ULV0 1848 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms