RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ARHGEF5Q12774 1597 aa19.94■□□□□ 0.78
VAMP1-206ENST00000538970 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
VAMP1-206ENST00000538970 RSPH4AQ5TD94 716 aa19.91■□□□□ 0.78
VAMP1-206ENST00000538970 MAP3K1Q13233 1512 aa19.91■□□□□ 0.78
VAMP1-206ENST00000538970 HSPA1LP34931 641 aa19.89■□□□□ 0.77
VAMP1-206ENST00000538970 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
VAMP1-206ENST00000538970 KDM5DQ9BY66 1539 aa19.88■□□□□ 0.77
VAMP1-206ENST00000538970 PLA2R1Q13018 1463 aa19.88■□□□□ 0.77
VAMP1-206ENST00000538970 KIF3BO15066 747 aa19.86■□□□□ 0.77
VAMP1-206ENST00000538970 MAST1Q9Y2H9 1570 aa19.85■□□□□ 0.77
VAMP1-206ENST00000538970 TCOF1Q13428 1488 aaKnown RBP19.85■□□□□ 0.77
VAMP1-206ENST00000538970 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
VAMP1-206ENST00000538970 PIP4K2BP78356 416 aa19.84■□□□□ 0.77
VAMP1-206ENST00000538970 KANK4Q5T7N3 995 aaPredicted RBP19.84■□□□□ 0.77
VAMP1-206ENST00000538970 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
VAMP1-206ENST00000538970 PZPP20742 1482 aa19.84■□□□□ 0.77
VAMP1-206ENST00000538970 MYOM3Q5VTT5 1437 aa19.83■□□□□ 0.76
VAMP1-206ENST00000538970 TSPY4P0CV99 314 aa19.82■□□□□ 0.76
VAMP1-206ENST00000538970 TSPY10P0CW01 314 aa19.82■□□□□ 0.76
VAMP1-206ENST00000538970 MIA2Q96PC5 1412 aa19.82■□□□□ 0.76
VAMP1-206ENST00000538970 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
VAMP1-206ENST00000538970 PKD2Q13563 968 aa19.8■□□□□ 0.76
VAMP1-206ENST00000538970 TNRQ92752 1358 aa19.8■□□□□ 0.76
VAMP1-206ENST00000538970 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
VAMP1-206ENST00000538970 WASHC2CQ9Y4E1 1318 aa19.78■□□□□ 0.76
VAMP1-206ENST00000538970 FBXO31Q5XUX0 539 aaPredicted RBP19.78■□□□□ 0.76
VAMP1-206ENST00000538970 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.76
VAMP1-206ENST00000538970 ABCC3O15438 1527 aa19.75■□□□□ 0.75
VAMP1-206ENST00000538970 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
VAMP1-206ENST00000538970 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
VAMP1-206ENST00000538970 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
VAMP1-206ENST00000538970 NLRP1Q9C000 1473 aa19.73■□□□□ 0.75
VAMP1-206ENST00000538970 NEURL4Q96JN8 1562 aa19.72■□□□□ 0.75
VAMP1-206ENST00000538970 ALKQ9UM73 1620 aa19.72■□□□□ 0.75
VAMP1-206ENST00000538970 POLR1AO95602 1720 aaPredicted RBP19.71■□□□□ 0.75
VAMP1-206ENST00000538970 SHANK2Q9UPX8 1470 aa19.71■□□□□ 0.75
VAMP1-206ENST00000538970 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
VAMP1-206ENST00000538970 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
VAMP1-206ENST00000538970 TOM1O60784 492 aa19.7■□□□□ 0.74
VAMP1-206ENST00000538970 PTPN23Q9H3S7 1636 aa19.69■□□□□ 0.74
VAMP1-206ENST00000538970 CPS1P31327 1500 aa19.68■□□□□ 0.74
VAMP1-206ENST00000538970 UGGT1Q9NYU2 1555 aa19.68■□□□□ 0.74
VAMP1-206ENST00000538970 ABCC5O15440 1437 aa19.68■□□□□ 0.74
VAMP1-206ENST00000538970 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
VAMP1-206ENST00000538970 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
VAMP1-206ENST00000538970 APLP2Q06481 763 aa19.66■□□□□ 0.74
VAMP1-206ENST00000538970 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.66■□□□□ 0.74
VAMP1-206ENST00000538970 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
VAMP1-206ENST00000538970 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
VAMP1-206ENST00000538970 FGD6Q6ZV73 1430 aa19.65■□□□□ 0.74
VAMP1-206ENST00000538970 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
VAMP1-206ENST00000538970 CEP152O94986 1710 aa19.65■□□□□ 0.74
VAMP1-206ENST00000538970 DAPK1P53355 1430 aa19.64■□□□□ 0.73
VAMP1-206ENST00000538970 DEPDC5O75140 1603 aa19.63■□□□□ 0.73
VAMP1-206ENST00000538970 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
VAMP1-206ENST00000538970 THEMISQ8N1K5 641 aaPredicted RBP19.63■□□□□ 0.73
VAMP1-206ENST00000538970 MED14O60244 1454 aa19.62■□□□□ 0.73
VAMP1-206ENST00000538970 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
VAMP1-206ENST00000538970 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
VAMP1-206ENST00000538970 RGS17Q9UGC6 210 aaPredicted RBP19.59■□□□□ 0.73
VAMP1-206ENST00000538970 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
VAMP1-206ENST00000538970 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.72
VAMP1-206ENST00000538970 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
VAMP1-206ENST00000538970 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
VAMP1-206ENST00000538970 ANKRD30AQ9BXX3 1397 aa19.54■□□□□ 0.72
VAMP1-206ENST00000538970 STRCP1A6NGW2 1772 aa19.53■□□□□ 0.72
VAMP1-206ENST00000538970 LMTK2Q8IWU2 1503 aa19.52■□□□□ 0.72
VAMP1-206ENST00000538970 KANK1Q14678 1352 aa19.51■□□□□ 0.71
VAMP1-206ENST00000538970 ADGRL2O95490 1459 aa19.51■□□□□ 0.71
VAMP1-206ENST00000538970 ARHGAP23Q9P227 1491 aa19.51■□□□□ 0.71
VAMP1-206ENST00000538970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.5■□□□□ 0.71
VAMP1-206ENST00000538970 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
VAMP1-206ENST00000538970 SLIT1O75093 1534 aa19.5■□□□□ 0.71
VAMP1-206ENST00000538970 LRRC7Q96NW7 1537 aa19.5■□□□□ 0.71
VAMP1-206ENST00000538970 SCAF11Q99590 1463 aaKnown RBP19.49■□□□□ 0.71
VAMP1-206ENST00000538970 PIK3C2BO00750 1634 aa19.47■□□□□ 0.71
VAMP1-206ENST00000538970 SYNMO15061 1565 aa19.47■□□□□ 0.71
VAMP1-206ENST00000538970 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
VAMP1-206ENST00000538970 EFCAB6Q5THR3 1501 aa19.46■□□□□ 0.71
VAMP1-206ENST00000538970 LTKP29376 864 aa19.44■□□□□ 0.7
VAMP1-206ENST00000538970 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
VAMP1-206ENST00000538970 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
VAMP1-206ENST00000538970 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
VAMP1-206ENST00000538970 TMEM2Q9UHN6 1383 aa19.42■□□□□ 0.7
VAMP1-206ENST00000538970 NOS1P29475 1434 aa19.42■□□□□ 0.7
VAMP1-206ENST00000538970 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
VAMP1-206ENST00000538970 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
VAMP1-206ENST00000538970 ADGRB3O60242 1522 aa19.38■□□□□ 0.69
VAMP1-206ENST00000538970 IDI1Q13907 227 aa19.38■□□□□ 0.69
VAMP1-206ENST00000538970 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
VAMP1-206ENST00000538970 SETD1AO15047 1707 aaKnown RBP19.37■□□□□ 0.69
VAMP1-206ENST00000538970 RPRD2Q5VT52 1461 aaKnown RBP19.36■□□□□ 0.69
VAMP1-206ENST00000538970 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
VAMP1-206ENST00000538970 TET3O43151 1660 aa19.35■□□□□ 0.69
VAMP1-206ENST00000538970 UNC13BO14795 1591 aa19.35■□□□□ 0.69
VAMP1-206ENST00000538970 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
VAMP1-206ENST00000538970 SLC52A1Q9NWF4 448 aa19.32■□□□□ 0.68
VAMP1-206ENST00000538970 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
VAMP1-206ENST00000538970 GCC2Q8IWJ2 1684 aa19.3■□□□□ 0.68
VAMP1-206ENST00000538970 ZFYVE9O95405 1425 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms