RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CEP152O94986 1710 aa23.44■■□□□ 1.34
RAB40B-202ENST00000538809 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
RAB40B-202ENST00000538809 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
RAB40B-202ENST00000538809 FGD6Q6ZV73 1430 aa23.43■■□□□ 1.34
RAB40B-202ENST00000538809 CAMSAP1Q5T5Y3 1602 aa23.42■■□□□ 1.34
RAB40B-202ENST00000538809 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
RAB40B-202ENST00000538809 TCOF1Q13428 1488 aaKnown RBP23.41■■□□□ 1.34
RAB40B-202ENST00000538809 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
RAB40B-202ENST00000538809 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
RAB40B-202ENST00000538809 SHANK2Q9UPX8 1470 aa23.4■■□□□ 1.34
RAB40B-202ENST00000538809 ABCC5O15440 1437 aa23.39■■□□□ 1.33
RAB40B-202ENST00000538809 CFAP65Q6ZU64 1925 aaKnown RBP23.39■■□□□ 1.33
RAB40B-202ENST00000538809 DUOX2Q9NRD8 1548 aa23.38■■□□□ 1.33
RAB40B-202ENST00000538809 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
RAB40B-202ENST00000538809 DAPK1P53355 1430 aa23.37■■□□□ 1.33
RAB40B-202ENST00000538809 PZPP20742 1482 aa23.36■■□□□ 1.33
RAB40B-202ENST00000538809 ABCC3O15438 1527 aa23.35■■□□□ 1.33
RAB40B-202ENST00000538809 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.32
RAB40B-202ENST00000538809 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
RAB40B-202ENST00000538809 POLR1AO95602 1720 aaPredicted RBP23.32■■□□□ 1.32
RAB40B-202ENST00000538809 FBXO41Q8TF61 875 aa23.31■■□□□ 1.32
RAB40B-202ENST00000538809 PTPRTO14522 1441 aa23.31■■□□□ 1.32
RAB40B-202ENST00000538809 A2ML1A8K2U0 1454 aa23.3■■□□□ 1.32
RAB40B-202ENST00000538809 FBXO31Q5XUX0 539 aaPredicted RBP23.3■■□□□ 1.32
RAB40B-202ENST00000538809 DMRT2Q9Y5R5 561 aa23.3■■□□□ 1.32
RAB40B-202ENST00000538809 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
RAB40B-202ENST00000538809 TNRQ92752 1358 aa23.29■■□□□ 1.32
RAB40B-202ENST00000538809 PRDM15P57071 1507 aaPredicted RBP23.29■■□□□ 1.32
RAB40B-202ENST00000538809 PLA2R1Q13018 1463 aa23.28■■□□□ 1.32
RAB40B-202ENST00000538809 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
RAB40B-202ENST00000538809 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
RAB40B-202ENST00000538809 CERKQ8TCT0 537 aa23.25■■□□□ 1.31
RAB40B-202ENST00000538809 SPATA31D1Q6ZQQ2 1576 aa23.24■■□□□ 1.31
RAB40B-202ENST00000538809 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
RAB40B-202ENST00000538809 NCKAP5LQ9HCH0 1330 aa23.24■■□□□ 1.31
RAB40B-202ENST00000538809 FAM50AQ14320 339 aaKnown RBP23.22■■□□□ 1.31
RAB40B-202ENST00000538809 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
RAB40B-202ENST00000538809 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
RAB40B-202ENST00000538809 LTBP4Q8N2S1 1624 aa23.21■■□□□ 1.31
RAB40B-202ENST00000538809 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
RAB40B-202ENST00000538809 NLRP1Q9C000 1473 aa23.2■■□□□ 1.3
RAB40B-202ENST00000538809 NEURL4Q96JN8 1562 aa23.19■■□□□ 1.3
RAB40B-202ENST00000538809 UGGT1Q9NYU2 1555 aa23.18■■□□□ 1.3
RAB40B-202ENST00000538809 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
RAB40B-202ENST00000538809 PKD2Q13563 968 aa23.15■■□□□ 1.3
RAB40B-202ENST00000538809 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.3
RAB40B-202ENST00000538809 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
RAB40B-202ENST00000538809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
RAB40B-202ENST00000538809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
RAB40B-202ENST00000538809 KANK1Q14678 1352 aa23.11■■□□□ 1.29
RAB40B-202ENST00000538809 ARHGAP31Q2M1Z3 1444 aa23.1■■□□□ 1.29
RAB40B-202ENST00000538809 IQGAP1P46940 1657 aa23.09■■□□□ 1.29
RAB40B-202ENST00000538809 ZNF335Q9H4Z2 1342 aaPredicted RBP23.09■■□□□ 1.29
RAB40B-202ENST00000538809 LMTK2Q8IWU2 1503 aa23.09■■□□□ 1.29
RAB40B-202ENST00000538809 PIK3C2BO00750 1634 aa23.09■■□□□ 1.29
RAB40B-202ENST00000538809 EFCAB6Q5THR3 1501 aa23.08■■□□□ 1.29
RAB40B-202ENST00000538809 ANKRD50Q9ULJ7 1429 aa23.07■■□□□ 1.28
RAB40B-202ENST00000538809 UNC13BO14795 1591 aa23.06■■□□□ 1.28
RAB40B-202ENST00000538809 THEMISQ8N1K5 641 aaPredicted RBP23.05■■□□□ 1.28
RAB40B-202ENST00000538809 GCC2Q8IWJ2 1684 aa23.05■■□□□ 1.28
RAB40B-202ENST00000538809 SYNMO15061 1565 aa23.05■■□□□ 1.28
RAB40B-202ENST00000538809 TET3O43151 1660 aa23.04■■□□□ 1.28
RAB40B-202ENST00000538809 IQSEC2Q5JU85 1478 aa23.04■■□□□ 1.28
RAB40B-202ENST00000538809 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
RAB40B-202ENST00000538809 NPHP4O75161 1426 aaPredicted RBP23.01■■□□□ 1.27
RAB40B-202ENST00000538809 ANKLE2Q86XL3 938 aa23.01■■□□□ 1.27
RAB40B-202ENST00000538809 KDM5AP29375 1690 aaKnown RBP23■■□□□ 1.27
RAB40B-202ENST00000538809 MED14O60244 1454 aa23■■□□□ 1.27
RAB40B-202ENST00000538809 STRCP1A6NGW2 1772 aa22.99■■□□□ 1.27
RAB40B-202ENST00000538809 ITGAEP38570 1179 aa22.98■■□□□ 1.27
RAB40B-202ENST00000538809 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
RAB40B-202ENST00000538809 SLIT1O75093 1534 aa22.97■■□□□ 1.27
RAB40B-202ENST00000538809 IQGAP3Q86VI3 1631 aa22.97■■□□□ 1.27
RAB40B-202ENST00000538809 E9PCH4 1651 aa22.97■■□□□ 1.27
RAB40B-202ENST00000538809 SCAF11Q99590 1463 aaKnown RBP22.95■■□□□ 1.26
RAB40B-202ENST00000538809 ARHGAP23Q9P227 1491 aa22.95■■□□□ 1.26
RAB40B-202ENST00000538809 ADGRB3O60242 1522 aa22.94■■□□□ 1.26
RAB40B-202ENST00000538809 NOS1P29475 1434 aa22.94■■□□□ 1.26
RAB40B-202ENST00000538809 CPS1P31327 1500 aa22.93■■□□□ 1.26
RAB40B-202ENST00000538809 RPRD2Q5VT52 1461 aaKnown RBP22.92■■□□□ 1.26
RAB40B-202ENST00000538809 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
RAB40B-202ENST00000538809 IDI1Q13907 227 aa22.87■■□□□ 1.25
RAB40B-202ENST00000538809 STAG3Q9UJ98 1225 aa22.87■■□□□ 1.25
RAB40B-202ENST00000538809 LTKP29376 864 aa22.86■■□□□ 1.25
RAB40B-202ENST00000538809 TMEM2Q9UHN6 1383 aa22.86■■□□□ 1.25
RAB40B-202ENST00000538809 TMEM131LA2VDJ0 1609 aa22.84■■□□□ 1.25
RAB40B-202ENST00000538809 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
RAB40B-202ENST00000538809 TXNDC2Q86VQ3 553 aa22.84■■□□□ 1.25
RAB40B-202ENST00000538809 XIRP1Q702N8 1843 aaKnown RBP22.84■■□□□ 1.25
RAB40B-202ENST00000538809 SPHKAPQ2M3C7 1700 aa22.82■■□□□ 1.24
RAB40B-202ENST00000538809 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
RAB40B-202ENST00000538809 NUP155O75694 1391 aa22.8■■□□□ 1.24
RAB40B-202ENST00000538809 LRRC7Q96NW7 1537 aa22.78■■□□□ 1.24
RAB40B-202ENST00000538809 SLC52A1Q9NWF4 448 aa22.78■■□□□ 1.24
RAB40B-202ENST00000538809 ALKQ9UM73 1620 aa22.77■■□□□ 1.24
RAB40B-202ENST00000538809 NAIPQ13075 1403 aa22.74■■□□□ 1.23
RAB40B-202ENST00000538809 ZFYVE9O95405 1425 aa22.74■■□□□ 1.23
RAB40B-202ENST00000538809 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
RAB40B-202ENST00000538809 RIMS2Q9UQ26 1411 aa22.72■■□□□ 1.23
RAB40B-202ENST00000538809 CHGAP10645 457 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms