RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 MAST1Q9Y2H9 1570 aa31.75■■■□□ 2.67
MSRB3-208ENST00000538725 CAMSAP1Q5T5Y3 1602 aa31.74■■■□□ 2.67
MSRB3-208ENST00000538725 FAM135AQ9P2D6 1515 aa31.72■■■□□ 2.67
MSRB3-208ENST00000538725 MYO3AQ8NEV4 1616 aa31.71■■■□□ 2.67
MSRB3-208ENST00000538725 KDM5DQ9BY66 1539 aa31.7■■■□□ 2.67
MSRB3-208ENST00000538725 ZNF142P52746 1687 aaPredicted RBP31.7■■■□□ 2.66
MSRB3-208ENST00000538725 FBXO31Q5XUX0 539 aaPredicted RBP31.68■■■□□ 2.66
MSRB3-208ENST00000538725 CEP170BQ9Y4F5 1589 aaPredicted RBP31.68■■■□□ 2.66
MSRB3-208ENST00000538725 NCKAP5LQ9HCH0 1330 aa31.67■■■□□ 2.66
MSRB3-208ENST00000538725 PKD2Q13563 968 aa31.65■■■□□ 2.66
MSRB3-208ENST00000538725 PZPP20742 1482 aa31.65■■■□□ 2.66
MSRB3-208ENST00000538725 PTPN23Q9H3S7 1636 aa31.63■■■□□ 2.65
MSRB3-208ENST00000538725 PLA2R1Q13018 1463 aa31.62■■■□□ 2.65
MSRB3-208ENST00000538725 TNRQ92752 1358 aa31.62■■■□□ 2.65
MSRB3-208ENST00000538725 A2ML1A8K2U0 1454 aa31.61■■■□□ 2.65
MSRB3-208ENST00000538725 RNF17Q9BXT8 1623 aaKnown RBP31.6■■■□□ 2.65
MSRB3-208ENST00000538725 EIF2AK4Q9P2K8 1649 aaKnown RBP31.6■■■□□ 2.65
MSRB3-208ENST00000538725 ABCC5O15440 1437 aa31.59■■■□□ 2.65
MSRB3-208ENST00000538725 FGD6Q6ZV73 1430 aa31.58■■■□□ 2.65
MSRB3-208ENST00000538725 DUOX2Q9NRD8 1548 aa31.58■■■□□ 2.65
MSRB3-208ENST00000538725 DNMT1P26358 1616 aaKnown RBP31.57■■■□□ 2.64
MSRB3-208ENST00000538725 TCOF1Q13428 1488 aaKnown RBP31.56■■■□□ 2.64
MSRB3-208ENST00000538725 SHANK2Q9UPX8 1470 aa31.55■■■□□ 2.64
MSRB3-208ENST00000538725 RRP7BPQ9NSQ0 103 aa31.55■■■□□ 2.64
MSRB3-208ENST00000538725 LTBP4Q8N2S1 1624 aa31.53■■■□□ 2.64
MSRB3-208ENST00000538725 DAPK1P53355 1430 aa31.53■■■□□ 2.64
MSRB3-208ENST00000538725 KIF15Q9NS87 1388 aa31.53■■■□□ 2.64
MSRB3-208ENST00000538725 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
MSRB3-208ENST00000538725 ABCC3O15438 1527 aa31.52■■■□□ 2.64
MSRB3-208ENST00000538725 ZC3H13Q5T200 1668 aaKnown RBP31.51■■■□□ 2.64
MSRB3-208ENST00000538725 THEMISQ8N1K5 641 aaPredicted RBP31.49■■■□□ 2.63
MSRB3-208ENST00000538725 MROH1Q8NDA8 1641 aa31.49■■■□□ 2.63
MSRB3-208ENST00000538725 NLRP1Q9C000 1473 aa31.48■■■□□ 2.63
MSRB3-208ENST00000538725 ERBINQ96RT1 1412 aa31.46■■■□□ 2.63
MSRB3-208ENST00000538725 CHIC2Q9UKJ5 165 aa31.45■■■□□ 2.63
MSRB3-208ENST00000538725 ZNF335Q9H4Z2 1342 aaPredicted RBP31.45■■■□□ 2.62
MSRB3-208ENST00000538725 ANKRD30AQ9BXX3 1397 aa31.43■■■□□ 2.62
MSRB3-208ENST00000538725 IQSEC2Q5JU85 1478 aa31.42■■■□□ 2.62
MSRB3-208ENST00000538725 ANKLE2Q86XL3 938 aa31.42■■■□□ 2.62
MSRB3-208ENST00000538725 CEP152O94986 1710 aa31.41■■■□□ 2.62
MSRB3-208ENST00000538725 SPATA31D1Q6ZQQ2 1576 aa31.41■■■□□ 2.62
MSRB3-208ENST00000538725 UGGT1Q9NYU2 1555 aa31.41■■■□□ 2.62
MSRB3-208ENST00000538725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.41■■■□□ 2.62
MSRB3-208ENST00000538725 CFAP65Q6ZU64 1925 aaKnown RBP31.39■■■□□ 2.62
MSRB3-208ENST00000538725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.39■■■□□ 2.62
MSRB3-208ENST00000538725 ERVK-7P63135 1459 aa31.39■■■□□ 2.62
MSRB3-208ENST00000538725 FAM50AQ14320 339 aaKnown RBP31.38■■■□□ 2.61
MSRB3-208ENST00000538725 POLR1AO95602 1720 aaPredicted RBP31.38■■■□□ 2.61
MSRB3-208ENST00000538725 PRDM15P57071 1507 aaPredicted RBP31.37■■■□□ 2.61
MSRB3-208ENST00000538725 ARHGAP31Q2M1Z3 1444 aa31.34■■■□□ 2.61
MSRB3-208ENST00000538725 KANK1Q14678 1352 aa31.34■■■□□ 2.61
MSRB3-208ENST00000538725 NEURL4Q96JN8 1562 aa31.34■■■□□ 2.61
MSRB3-208ENST00000538725 DEPDC5O75140 1603 aa31.32■■■□□ 2.6
MSRB3-208ENST00000538725 ADGRL2O95490 1459 aa31.29■■■□□ 2.6
MSRB3-208ENST00000538725 MED14O60244 1454 aa31.27■■■□□ 2.6
MSRB3-208ENST00000538725 NPHP4O75161 1426 aaPredicted RBP31.25■■■□□ 2.59
MSRB3-208ENST00000538725 FOXD1Q16676 465 aa31.24■■■□□ 2.59
MSRB3-208ENST00000538725 UBAP1LF5GYI3 381 aa31.22■■■□□ 2.59
MSRB3-208ENST00000538725 LMTK2Q8IWU2 1503 aa31.22■■■□□ 2.59
MSRB3-208ENST00000538725 VWDEQ8N2E2 1590 aa31.22■■■□□ 2.59
MSRB3-208ENST00000538725 UBR1Q8IWV7 1749 aa31.21■■■□□ 2.59
MSRB3-208ENST00000538725 ANKRD50Q9ULJ7 1429 aa31.18■■■□□ 2.58
MSRB3-208ENST00000538725 CPS1P31327 1500 aa31.18■■■□□ 2.58
MSRB3-208ENST00000538725 IQGAP1P46940 1657 aa31.16■■■□□ 2.58
MSRB3-208ENST00000538725 TXNDC2Q86VQ3 553 aa31.14■■■□□ 2.58
MSRB3-208ENST00000538725 STAG3Q9UJ98 1225 aa31.13■■■□□ 2.57
MSRB3-208ENST00000538725 LTKP29376 864 aa31.12■■■□□ 2.57
MSRB3-208ENST00000538725 IDI1Q13907 227 aa31.12■■■□□ 2.57
MSRB3-208ENST00000538725 SLIT1O75093 1534 aa31.11■■■□□ 2.57
MSRB3-208ENST00000538725 PPARGC1BQ86YN6 1023 aaKnown RBP31.11■■■□□ 2.57
MSRB3-208ENST00000538725 ARHGAP23Q9P227 1491 aa31.11■■■□□ 2.57
MSRB3-208ENST00000538725 EID1Q9Y6B2 187 aa31.11■■■□□ 2.57
MSRB3-208ENST00000538725 PIK3C2BO00750 1634 aa31.1■■■□□ 2.57
MSRB3-208ENST00000538725 SCAF11Q99590 1463 aaKnown RBP31.1■■■□□ 2.57
MSRB3-208ENST00000538725 EFCAB6Q5THR3 1501 aa31.08■■■□□ 2.57
MSRB3-208ENST00000538725 ROCK1Q13464 1354 aa31.07■■■□□ 2.56
MSRB3-208ENST00000538725 NOS1P29475 1434 aa31.07■■■□□ 2.56
MSRB3-208ENST00000538725 TMEM2Q9UHN6 1383 aa31.05■■■□□ 2.56
MSRB3-208ENST00000538725 TOM1O60784 492 aa31.05■■■□□ 2.56
MSRB3-208ENST00000538725 SLC52A1Q9NWF4 448 aa31.05■■■□□ 2.56
MSRB3-208ENST00000538725 KDM5AP29375 1690 aaKnown RBP31.04■■■□□ 2.56
MSRB3-208ENST00000538725 SYNMO15061 1565 aa31.04■■■□□ 2.56
MSRB3-208ENST00000538725 RPRD2Q5VT52 1461 aaKnown RBP31.02■■■□□ 2.56
MSRB3-208ENST00000538725 ITGAEP38570 1179 aa31.01■■■□□ 2.55
MSRB3-208ENST00000538725 STRCP1A6NGW2 1772 aa30.99■■■□□ 2.55
MSRB3-208ENST00000538725 TET3O43151 1660 aa30.97■■■□□ 2.55
MSRB3-208ENST00000538725 PIP4K2BP78356 416 aa30.97■■■□□ 2.55
MSRB3-208ENST00000538725 UNC13BO14795 1591 aa30.96■■■□□ 2.55
MSRB3-208ENST00000538725 DISP3Q9P2K9 1392 aa30.96■■■□□ 2.55
MSRB3-208ENST00000538725 SCAF1Q9H7N4 1312 aaKnown RBP30.96■■■□□ 2.55
MSRB3-208ENST00000538725 LRRC7Q96NW7 1537 aa30.94■■■□□ 2.54
MSRB3-208ENST00000538725 GCC2Q8IWJ2 1684 aa30.93■■■□□ 2.54
MSRB3-208ENST00000538725 ADGRB3O60242 1522 aa30.92■■■□□ 2.54
MSRB3-208ENST00000538725 NUP155O75694 1391 aa30.88■■■□□ 2.53
MSRB3-208ENST00000538725 HSPA1LP34931 641 aa30.86■■■□□ 2.53
MSRB3-208ENST00000538725 IQGAP3Q86VI3 1631 aa30.86■■■□□ 2.53
MSRB3-208ENST00000538725 HDGFP51858 240 aaKnown RBP30.85■■■□□ 2.53
MSRB3-208ENST00000538725 SLC26A8Q96RN1 970 aa30.85■■■□□ 2.53
MSRB3-208ENST00000538725 E9PCH4 1651 aa30.84■■■□□ 2.53
MSRB3-208ENST00000538725 ALKQ9UM73 1620 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms