RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
NPIPB3-209ENST00000538439 PTPN23Q9H3S7 1636 aa15.17■□□□□ 0.02
NPIPB3-209ENST00000538439 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
NPIPB3-209ENST00000538439 PLCH2O75038 1416 aa15.17■□□□□ 0.02
NPIPB3-209ENST00000538439 TCOF1Q13428 1488 aaKnown RBP15.16■□□□□ 0.02
NPIPB3-209ENST00000538439 EFCAB2Q5VUJ9 269 aa15.16■□□□□ 0.02
NPIPB3-209ENST00000538439 FBXO41Q8TF61 875 aa15.16■□□□□ 0.02
NPIPB3-209ENST00000538439 ABCA9Q8IUA7 1624 aa15.16■□□□□ 0.02
NPIPB3-209ENST00000538439 CDC42BPAQ5VT25 1732 aa15.15■□□□□ 0.02
NPIPB3-209ENST00000538439 ITGAEP38570 1179 aa15.15■□□□□ 0.02
NPIPB3-209ENST00000538439 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
NPIPB3-209ENST00000538439 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
NPIPB3-209ENST00000538439 ARHGAP5Q13017 1502 aa15.14■□□□□ 0.01
NPIPB3-209ENST00000538439 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
NPIPB3-209ENST00000538439 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
NPIPB3-209ENST00000538439 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
NPIPB3-209ENST00000538439 CAMSAP2Q08AD1 1489 aa15.12■□□□□ 0.01
NPIPB3-209ENST00000538439 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
NPIPB3-209ENST00000538439 PLEKHH2Q8IVE3 1493 aa15.1■□□□□ 0.01
NPIPB3-209ENST00000538439 CDC42BPBQ9Y5S2 1711 aa15.1■□□□□ 0.01
NPIPB3-209ENST00000538439 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
NPIPB3-209ENST00000538439 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
NPIPB3-209ENST00000538439 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
NPIPB3-209ENST00000538439 FANCAO15360 1455 aa15.08■□□□□ 0
NPIPB3-209ENST00000538439 PITPNM1O00562 1244 aa15.07■□□□□ 0
NPIPB3-209ENST00000538439 RASEFQ8IZ41 740 aa15.07■□□□□ 0
NPIPB3-209ENST00000538439 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
NPIPB3-209ENST00000538439 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
NPIPB3-209ENST00000538439 SAMD9LQ8IVG5 1584 aa15.06■□□□□ 0
NPIPB3-209ENST00000538439 TSPY4P0CV99 314 aa15.05■□□□□ -0
NPIPB3-209ENST00000538439 TSPY10P0CW01 314 aa15.05■□□□□ -0
NPIPB3-209ENST00000538439 DAPK1P53355 1430 aa15.05■□□□□ -0
NPIPB3-209ENST00000538439 TEX14Q8IWB6 1497 aa15.05■□□□□ -0
NPIPB3-209ENST00000538439 ABCC5O15440 1437 aa15.04■□□□□ -0
NPIPB3-209ENST00000538439 DNMT1P26358 1616 aaKnown RBP15.03■□□□□ -0
NPIPB3-209ENST00000538439 CFAP74Q9C0B2 1584 aa15.03■□□□□ -0
NPIPB3-209ENST00000538439 AKNAQ7Z591 1439 aa15.03■□□□□ -0
NPIPB3-209ENST00000538439 STK25O00506 426 aa15.03■□□□□ -0
NPIPB3-209ENST00000538439 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
NPIPB3-209ENST00000538439 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
NPIPB3-209ENST00000538439 NEO1Q92859 1461 aa15.01□□□□□ -0.01
NPIPB3-209ENST00000538439 MBD5Q9P267 1494 aa15.01□□□□□ -0.01
NPIPB3-209ENST00000538439 PTPRKQ15262 1439 aa15.01□□□□□ -0.01
NPIPB3-209ENST00000538439 SYCP2Q9BX26 1530 aa15.01□□□□□ -0.01
NPIPB3-209ENST00000538439 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
NPIPB3-209ENST00000538439 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
NPIPB3-209ENST00000538439 ABCC1P33527 1531 aa15□□□□□ -0.01
NPIPB3-209ENST00000538439 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
NPIPB3-209ENST00000538439 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
NPIPB3-209ENST00000538439 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
NPIPB3-209ENST00000538439 NKX1-1Q15270 411 aaPredicted RBP14.98□□□□□ -0.01
NPIPB3-209ENST00000538439 ANKRD30AQ9BXX3 1397 aa14.98□□□□□ -0.01
NPIPB3-209ENST00000538439 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
NPIPB3-209ENST00000538439 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
NPIPB3-209ENST00000538439 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
NPIPB3-209ENST00000538439 SETD5Q9C0A6 1442 aa14.97□□□□□ -0.01
NPIPB3-209ENST00000538439 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
NPIPB3-209ENST00000538439 TRAPPC8Q9Y2L5 1435 aa14.96□□□□□ -0.01
NPIPB3-209ENST00000538439 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
NPIPB3-209ENST00000538439 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
NPIPB3-209ENST00000538439 PTPRMP28827 1452 aa14.95□□□□□ -0.02
NPIPB3-209ENST00000538439 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 CROCC2H7BZ55 1655 aa14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 PYGBP11216 843 aa14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 HRCP23327 699 aa14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 DENND4BO75064 1496 aaPredicted RBP14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
NPIPB3-209ENST00000538439 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
NPIPB3-209ENST00000538439 GTPBP6O43824 516 aaPredicted RBP14.93□□□□□ -0.02
NPIPB3-209ENST00000538439 NAIPQ13075 1403 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 RYDENQ9NUL5 291 aaKnown RBP14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 STK24Q9Y6E0 443 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 ZNF518AQ6AHZ1 1483 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 MAST1Q9Y2H9 1570 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 RTEL1-TNFRSF6BF6WH68 1400 aa14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
NPIPB3-209ENST00000538439 ADGBQ8N7X0 1667 aa14.91□□□□□ -0.02
NPIPB3-209ENST00000538439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.91□□□□□ -0.02
NPIPB3-209ENST00000538439 ZFP91Q96JP5 570 aaPredicted RBP14.91□□□□□ -0.02
NPIPB3-209ENST00000538439 BCL11BQ9C0K0 894 aaPredicted RBP14.91□□□□□ -0.02
NPIPB3-209ENST00000538439 POGZQ7Z3K3 1410 aa14.91□□□□□ -0.02
NPIPB3-209ENST00000538439 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
NPIPB3-209ENST00000538439 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
NPIPB3-209ENST00000538439 RAPGEF3O95398 923 aa14.88□□□□□ -0.03
NPIPB3-209ENST00000538439 ILDR2Q71H61 639 aa14.87□□□□□ -0.03
NPIPB3-209ENST00000538439 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
NPIPB3-209ENST00000538439 PLXNC1O60486 1568 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 ANKRD50Q9ULJ7 1429 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 MLH3Q9UHC1 1453 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 NBR1Q14596 966 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 ATP7AQ04656 1500 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 KDM5CP41229 1560 aa14.85□□□□□ -0.03
NPIPB3-209ENST00000538439 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
NPIPB3-209ENST00000538439 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
NPIPB3-209ENST00000538439 TRIM52Q96A61 297 aa14.84□□□□□ -0.03
NPIPB3-209ENST00000538439 ZFYVE16Q7Z3T8 1539 aa14.83□□□□□ -0.04
NPIPB3-209ENST00000538439 DUOX2Q9NRD8 1548 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms