RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
PRKAB1-204ENST00000538271 CLTCQ00610 1675 aaKnown RBP16.72■□□□□ 0.27
PRKAB1-204ENST00000538271 SYNMO15061 1565 aa16.71■□□□□ 0.27
PRKAB1-204ENST00000538271 FAM135BQ49AJ0 1406 aa16.69■□□□□ 0.26
PRKAB1-204ENST00000538271 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
PRKAB1-204ENST00000538271 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
PRKAB1-204ENST00000538271 KIDINS220Q9ULH0 1771 aa16.65■□□□□ 0.26
PRKAB1-204ENST00000538271 MED14O60244 1454 aa16.65■□□□□ 0.26
PRKAB1-204ENST00000538271 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
PRKAB1-204ENST00000538271 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
PRKAB1-204ENST00000538271 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
PRKAB1-204ENST00000538271 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
PRKAB1-204ENST00000538271 DEPDC5O75140 1603 aa16.61■□□□□ 0.25
PRKAB1-204ENST00000538271 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
PRKAB1-204ENST00000538271 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
PRKAB1-204ENST00000538271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRKAB1-204ENST00000538271 XIRP1Q702N8 1843 aaKnown RBP16.6■□□□□ 0.25
PRKAB1-204ENST00000538271 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
PRKAB1-204ENST00000538271 RXRBP28702 533 aa16.59■□□□□ 0.25
PRKAB1-204ENST00000538271 CDK12Q9NYV4 1490 aaPredicted RBP16.59■□□□□ 0.25
PRKAB1-204ENST00000538271 CDK13Q14004 1512 aaKnown RBP16.59■□□□□ 0.25
PRKAB1-204ENST00000538271 IFFO2Q5TF58 517 aa16.58■□□□□ 0.24
PRKAB1-204ENST00000538271 ABCC1P33527 1531 aa16.58■□□□□ 0.24
PRKAB1-204ENST00000538271 ITSN2Q9NZM3 1697 aa16.58■□□□□ 0.24
PRKAB1-204ENST00000538271 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
PRKAB1-204ENST00000538271 RBM33Q96EV2 1170 aaKnown RBP16.56■□□□□ 0.24
PRKAB1-204ENST00000538271 JCADQ9P266 1359 aa16.55■□□□□ 0.24
PRKAB1-204ENST00000538271 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
PRKAB1-204ENST00000538271 KIF14Q15058 1648 aa16.53■□□□□ 0.24
PRKAB1-204ENST00000538271 LRP6O75581 1613 aa16.52■□□□□ 0.24
PRKAB1-204ENST00000538271 TNRQ92752 1358 aa16.52■□□□□ 0.24
PRKAB1-204ENST00000538271 GGT6Q6P531 493 aa16.52■□□□□ 0.24
PRKAB1-204ENST00000538271 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
PRKAB1-204ENST00000538271 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
PRKAB1-204ENST00000538271 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
PRKAB1-204ENST00000538271 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
PRKAB1-204ENST00000538271 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
PRKAB1-204ENST00000538271 UGGT1Q9NYU2 1555 aa16.47■□□□□ 0.23
PRKAB1-204ENST00000538271 FAM135AQ9P2D6 1515 aa16.47■□□□□ 0.23
PRKAB1-204ENST00000538271 ABCB7O75027 752 aa16.47■□□□□ 0.23
PRKAB1-204ENST00000538271 ZC3H13Q5T200 1668 aaKnown RBP16.46■□□□□ 0.23
PRKAB1-204ENST00000538271 SAMD9LQ8IVG5 1584 aa16.45■□□□□ 0.22
PRKAB1-204ENST00000538271 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
PRKAB1-204ENST00000538271 RGS12O14924 1447 aa16.45■□□□□ 0.22
PRKAB1-204ENST00000538271 SPATA31A6Q5VVP1 1343 aa16.45■□□□□ 0.22
PRKAB1-204ENST00000538271 RANGAP1P46060 587 aaPredicted RBP16.44■□□□□ 0.22
PRKAB1-204ENST00000538271 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
PRKAB1-204ENST00000538271 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-204ENST00000538271 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-204ENST00000538271 NUTM2DQ5VT03 806 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-204ENST00000538271 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
PRKAB1-204ENST00000538271 A2MP01023 1474 aa16.42■□□□□ 0.22
PRKAB1-204ENST00000538271 LRRC9Q6ZRR7 1453 aa16.42■□□□□ 0.22
PRKAB1-204ENST00000538271 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
PRKAB1-204ENST00000538271 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-204ENST00000538271 COL16A1Q07092 1604 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-204ENST00000538271 SPAG9O60271 1321 aaKnown RBP16.4■□□□□ 0.22
PRKAB1-204ENST00000538271 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
PRKAB1-204ENST00000538271 PZPP20742 1482 aa16.39■□□□□ 0.21
PRKAB1-204ENST00000538271 ATP7AQ04656 1500 aa16.39■□□□□ 0.21
PRKAB1-204ENST00000538271 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
PRKAB1-204ENST00000538271 LRP5O75197 1615 aa16.38■□□□□ 0.21
PRKAB1-204ENST00000538271 TROQ12816 1431 aaPredicted RBP16.38■□□□□ 0.21
PRKAB1-204ENST00000538271 MIA2Q96PC5 1412 aa16.38■□□□□ 0.21
PRKAB1-204ENST00000538271 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
PRKAB1-204ENST00000538271 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
PRKAB1-204ENST00000538271 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
PRKAB1-204ENST00000538271 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
PRKAB1-204ENST00000538271 AFF2P51816 1311 aa16.34■□□□□ 0.21
PRKAB1-204ENST00000538271 CLIP1P30622 1438 aa16.34■□□□□ 0.21
PRKAB1-204ENST00000538271 SHPRHQ149N8 1683 aa16.33■□□□□ 0.2
PRKAB1-204ENST00000538271 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
PRKAB1-204ENST00000538271 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
PRKAB1-204ENST00000538271 INO80Q9ULG1 1556 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-204ENST00000538271 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-204ENST00000538271 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
PRKAB1-204ENST00000538271 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
PRKAB1-204ENST00000538271 QTRT2Q9H974 415 aaKnown RBP16.29■□□□□ 0.2
PRKAB1-204ENST00000538271 SYCP2Q9BX26 1530 aa16.29■□□□□ 0.2
PRKAB1-204ENST00000538271 ADGBQ8N7X0 1667 aa16.28■□□□□ 0.2
PRKAB1-204ENST00000538271 YY1P25490 414 aa16.28■□□□□ 0.2
PRKAB1-204ENST00000538271 EP400Q96L91 3159 aa16.28■□□□□ 0.2
PRKAB1-204ENST00000538271 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
PRKAB1-204ENST00000538271 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
PRKAB1-204ENST00000538271 LTKP29376 864 aa16.26■□□□□ 0.19
PRKAB1-204ENST00000538271 PROSER2Q86WR7 435 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-204ENST00000538271 CCDC125Q86Z20 511 aa16.25■□□□□ 0.19
PRKAB1-204ENST00000538271 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
PRKAB1-204ENST00000538271 TIAM1Q13009 1591 aa16.24■□□□□ 0.19
PRKAB1-204ENST00000538271 MSH6P52701 1360 aa16.24■□□□□ 0.19
PRKAB1-204ENST00000538271 KCNA6P17658 529 aa16.23■□□□□ 0.19
PRKAB1-204ENST00000538271 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
PRKAB1-204ENST00000538271 NGLY1Q96IV0 654 aa16.22■□□□□ 0.19
PRKAB1-204ENST00000538271 PRDM15P57071 1507 aaPredicted RBP16.22■□□□□ 0.19
PRKAB1-204ENST00000538271 WASHC2CQ9Y4E1 1318 aa16.21■□□□□ 0.19
PRKAB1-204ENST00000538271 UBR1Q8IWV7 1749 aa16.21■□□□□ 0.19
PRKAB1-204ENST00000538271 AHDC1Q5TGY3 1603 aaPredicted RBP16.2■□□□□ 0.18
PRKAB1-204ENST00000538271 NWD1Q149M9 1564 aa16.19■□□□□ 0.18
PRKAB1-204ENST00000538271 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
PRKAB1-204ENST00000538271 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms