RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 MEX3CQ5U5Q3 659 aaKnown RBP9.97□□□□□ -0.81
MSH6-209ENST00000538136 ADAMTS2O95450 1211 aa9.97□□□□□ -0.81
MSH6-209ENST00000538136 PPP6R1Q9UPN7 881 aa9.97□□□□□ -0.81
MSH6-209ENST00000538136 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
MSH6-209ENST00000538136 NEUROD2Q15784 382 aa9.96□□□□□ -0.81
MSH6-209ENST00000538136 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
MSH6-209ENST00000538136 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.82
MSH6-209ENST00000538136 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.82
MSH6-209ENST00000538136 CFAP65Q6ZU64 1925 aaKnown RBP9.96□□□□□ -0.82
MSH6-209ENST00000538136 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
MSH6-209ENST00000538136 FOXO3O43524 673 aa9.95□□□□□ -0.82
MSH6-209ENST00000538136 DDX17Q92841 729 aaKnown RBP9.94□□□□□ -0.82
MSH6-209ENST00000538136 CABP2Q9NPB3 220 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 ST20-MTHFSA0A0A6YYL1 179 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 PSME1Q06323 249 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 FAM9BQ8IZU0 186 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 TEX14Q8IWB6 1497 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 ABCC5O15440 1437 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
MSH6-209ENST00000538136 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
MSH6-209ENST00000538136 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
MSH6-209ENST00000538136 CAMSAP2Q08AD1 1489 aa9.93□□□□□ -0.82
MSH6-209ENST00000538136 DAPK1P53355 1430 aa9.92□□□□□ -0.82
MSH6-209ENST00000538136 KDM4FA0A1W2PPD8 638 aa9.92□□□□□ -0.82
MSH6-209ENST00000538136 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
MSH6-209ENST00000538136 AMOTL2Q9Y2J4 779 aa9.92□□□□□ -0.82
MSH6-209ENST00000538136 ROCK2O75116 1388 aaKnown RBP9.91□□□□□ -0.82
MSH6-209ENST00000538136 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
MSH6-209ENST00000538136 TIAM1Q13009 1591 aa9.91□□□□□ -0.82
MSH6-209ENST00000538136 PTPRKQ15262 1439 aa9.91□□□□□ -0.82
MSH6-209ENST00000538136 MIA2Q96PC5 1412 aa9.9□□□□□ -0.82
MSH6-209ENST00000538136 CCDC141Q6ZP82 1450 aa9.9□□□□□ -0.82
MSH6-209ENST00000538136 COL17A1Q9UMD9 1497 aaPredicted RBP9.9□□□□□ -0.82
MSH6-209ENST00000538136 KIF14Q15058 1648 aa9.9□□□□□ -0.82
MSH6-209ENST00000538136 U2SURPO15042 1029 aaKnown RBP9.9□□□□□ -0.83
MSH6-209ENST00000538136 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
MSH6-209ENST00000538136 STRN4Q9NRL3 753 aa9.89□□□□□ -0.83
MSH6-209ENST00000538136 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
MSH6-209ENST00000538136 HSPA5P11021 654 aaKnown RBP9.89□□□□□ -0.83
MSH6-209ENST00000538136 ZC3H6P61129 1189 aaKnown RBP9.88□□□□□ -0.83
MSH6-209ENST00000538136 SLC52A1Q9NWF4 448 aa9.88□□□□□ -0.83
MSH6-209ENST00000538136 LTKP29376 864 aa9.88□□□□□ -0.83
MSH6-209ENST00000538136 ZNF335Q9H4Z2 1342 aaPredicted RBP9.88□□□□□ -0.83
MSH6-209ENST00000538136 EHBP1L1Q8N3D4 1523 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 ANP32CO43423 234 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 KCNA6P17658 529 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 KNSTRNQ9Y448 316 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 MAGI3Q5TCQ9 1506 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 KDM5BQ9UGL1 1544 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 NCOA1Q15788 1441 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 CABLES1Q8TDN4 633 aa9.87□□□□□ -0.83
MSH6-209ENST00000538136 TNRQ92752 1358 aa9.86□□□□□ -0.83
MSH6-209ENST00000538136 A2MP01023 1474 aa9.86□□□□□ -0.83
MSH6-209ENST00000538136 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
MSH6-209ENST00000538136 ZNF316A6NFI3 1004 aaPredicted RBP9.86□□□□□ -0.83
MSH6-209ENST00000538136 ZNF330Q9Y3S2 320 aaPredicted RBP9.86□□□□□ -0.83
MSH6-209ENST00000538136 EVA1CP58658 441 aa9.86□□□□□ -0.83
MSH6-209ENST00000538136 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
MSH6-209ENST00000538136 FBLN1P23142 703 aa9.85□□□□□ -0.83
MSH6-209ENST00000538136 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.85□□□□□ -0.83
MSH6-209ENST00000538136 NEFMP07197 916 aa9.85□□□□□ -0.83
MSH6-209ENST00000538136 SYTL4Q96C24 671 aaPredicted RBP9.85□□□□□ -0.83
MSH6-209ENST00000538136 CTTNBP2Q8WZ74 1663 aa9.85□□□□□ -0.83
MSH6-209ENST00000538136 ADCY10Q96PN6 1610 aa9.84□□□□□ -0.83
MSH6-209ENST00000538136 TMF1P82094 1093 aa9.84□□□□□ -0.83
MSH6-209ENST00000538136 NBPF8Q3BBV2 869 aa9.84□□□□□ -0.83
MSH6-209ENST00000538136 LAS1LQ9Y4W2 734 aaKnown RBP9.84□□□□□ -0.83
MSH6-209ENST00000538136 NLRP6P59044 892 aa9.83□□□□□ -0.84
MSH6-209ENST00000538136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.83□□□□□ -0.84
MSH6-209ENST00000538136 SLC12A5Q9H2X9 1139 aa9.83□□□□□ -0.84
MSH6-209ENST00000538136 GGNBP2Q9H3C7 697 aa9.83□□□□□ -0.84
MSH6-209ENST00000538136 LMTK3Q96Q04 1460 aa9.82□□□□□ -0.84
MSH6-209ENST00000538136 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
MSH6-209ENST00000538136 ERBINQ96RT1 1412 aa9.82□□□□□ -0.84
MSH6-209ENST00000538136 CABP1Q9NZU7 370 aa9.82□□□□□ -0.84
MSH6-209ENST00000538136 KDM6BO15054 1643 aa9.81□□□□□ -0.84
MSH6-209ENST00000538136 NAIPQ13075 1403 aa9.81□□□□□ -0.84
MSH6-209ENST00000538136 DMRT2Q9Y5R5 561 aa9.81□□□□□ -0.84
MSH6-209ENST00000538136 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
MSH6-209ENST00000538136 AMPHP49418 695 aa9.81□□□□□ -0.84
MSH6-209ENST00000538136 NGLY1Q96IV0 654 aa9.81□□□□□ -0.84
MSH6-209ENST00000538136 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 HDGFL2Q7Z4V5 671 aaPredicted RBP9.8□□□□□ -0.84
MSH6-209ENST00000538136 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
MSH6-209ENST00000538136 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 KAT6BQ8WYB5 2073 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 SUPT6HQ7KZ85 1726 aaKnown RBP9.8□□□□□ -0.84
MSH6-209ENST00000538136 TOM1O60784 492 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 MORC1Q86VD1 984 aa9.8□□□□□ -0.84
MSH6-209ENST00000538136 ATP10AO60312 1499 aa9.79□□□□□ -0.84
MSH6-209ENST00000538136 C8orf37Q96NL8 207 aa9.79□□□□□ -0.84
MSH6-209ENST00000538136 MRS2Q9HD23 443 aa9.79□□□□□ -0.84
MSH6-209ENST00000538136 ABCA8O94911 1581 aa9.79□□□□□ -0.84
MSH6-209ENST00000538136 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
MSH6-209ENST00000538136 KLHL34Q8N239 644 aa9.78□□□□□ -0.84
MSH6-209ENST00000538136 CDK19Q9BWU1 502 aa9.78□□□□□ -0.84
MSH6-209ENST00000538136 ARHGEF12Q9NZN5 1544 aa9.78□□□□□ -0.84
MSH6-209ENST00000538136 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
MSH6-209ENST00000538136 NLRP2Q9NX02 1062 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms