RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
SEMA4D-221ENST00000537934 ARAP3Q8WWN8 1544 aa15.32■□□□□ 0.04
SEMA4D-221ENST00000537934 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-221ENST00000537934 TRAPPC8Q9Y2L5 1435 aa15.31■□□□□ 0.04
SEMA4D-221ENST00000537934 NEFMP07197 916 aa15.31■□□□□ 0.04
SEMA4D-221ENST00000537934 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
SEMA4D-221ENST00000537934 PKNOX2Q96KN3 472 aa15.3■□□□□ 0.04
SEMA4D-221ENST00000537934 KIF15Q9NS87 1388 aa15.3■□□□□ 0.04
SEMA4D-221ENST00000537934 ANKRD50Q9ULJ7 1429 aa15.3■□□□□ 0.04
SEMA4D-221ENST00000537934 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
SEMA4D-221ENST00000537934 CD109Q6YHK3 1445 aa15.29■□□□□ 0.04
SEMA4D-221ENST00000537934 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
SEMA4D-221ENST00000537934 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
SEMA4D-221ENST00000537934 AFAP1Q8N556 730 aa15.28■□□□□ 0.04
SEMA4D-221ENST00000537934 MPHOSPH9Q99550 1183 aa15.27■□□□□ 0.03
SEMA4D-221ENST00000537934 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
SEMA4D-221ENST00000537934 PPM1GO15355 546 aaPredicted RBP15.26■□□□□ 0.03
SEMA4D-221ENST00000537934 MAST1Q9Y2H9 1570 aa15.26■□□□□ 0.03
SEMA4D-221ENST00000537934 BRPF3Q9ULD4 1205 aa15.26■□□□□ 0.03
SEMA4D-221ENST00000537934 FOXD1Q16676 465 aa15.25■□□□□ 0.03
SEMA4D-221ENST00000537934 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
SEMA4D-221ENST00000537934 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
SEMA4D-221ENST00000537934 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-221ENST00000537934 LAS1LQ9Y4W2 734 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-221ENST00000537934 PLXNC1O60486 1568 aa15.22■□□□□ 0.03
SEMA4D-221ENST00000537934 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
SEMA4D-221ENST00000537934 PZPP20742 1482 aa15.22■□□□□ 0.03
SEMA4D-221ENST00000537934 GSE1Q14687 1217 aa15.21■□□□□ 0.03
SEMA4D-221ENST00000537934 TONSLQ96HA7 1378 aa15.21■□□□□ 0.02
SEMA4D-221ENST00000537934 ZFYVE16Q7Z3T8 1539 aa15.2■□□□□ 0.02
SEMA4D-221ENST00000537934 FAM69CQ0P6D2 419 aa15.2■□□□□ 0.02
SEMA4D-221ENST00000537934 RNF123Q5XPI4 1314 aa15.2■□□□□ 0.02
SEMA4D-221ENST00000537934 NUP155O75694 1391 aa15.19■□□□□ 0.02
SEMA4D-221ENST00000537934 CCDC184Q52MB2 194 aa15.19■□□□□ 0.02
SEMA4D-221ENST00000537934 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
SEMA4D-221ENST00000537934 DIP2BQ9P265 1576 aa15.18■□□□□ 0.02
SEMA4D-221ENST00000537934 SMG6Q86US8 1419 aaKnown RBP15.18■□□□□ 0.02
SEMA4D-221ENST00000537934 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
SEMA4D-221ENST00000537934 CFAP74Q9C0B2 1584 aa15.17■□□□□ 0.02
SEMA4D-221ENST00000537934 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
SEMA4D-221ENST00000537934 GLI2P10070 1586 aa15.16■□□□□ 0.02
SEMA4D-221ENST00000537934 INO80Q9ULG1 1556 aaPredicted RBP15.16■□□□□ 0.02
SEMA4D-221ENST00000537934 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
SEMA4D-221ENST00000537934 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
SEMA4D-221ENST00000537934 ZNF518AQ6AHZ1 1483 aa15.15■□□□□ 0.02
SEMA4D-221ENST00000537934 PKD2Q13563 968 aa15.15■□□□□ 0.02
SEMA4D-221ENST00000537934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
SEMA4D-221ENST00000537934 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 RAPGEF3O95398 923 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 GLIPR1L2Q4G1C9 344 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 TSPOAP1O95153 1857 aa15.14■□□□□ 0.01
SEMA4D-221ENST00000537934 NEO1Q92859 1461 aa15.13■□□□□ 0.01
SEMA4D-221ENST00000537934 CNTLNQ9NXG0 1405 aa15.13■□□□□ 0.01
SEMA4D-221ENST00000537934 ERBINQ96RT1 1412 aa15.13■□□□□ 0.01
SEMA4D-221ENST00000537934 KDM5DQ9BY66 1539 aa15.13■□□□□ 0.01
SEMA4D-221ENST00000537934 TCERG1O14776 1098 aaKnown RBP15.12■□□□□ 0.01
SEMA4D-221ENST00000537934 PRKRIP1Q9H875 184 aaPredicted RBP15.12■□□□□ 0.01
SEMA4D-221ENST00000537934 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
SEMA4D-221ENST00000537934 KIDINS220Q9ULH0 1771 aa15.12■□□□□ 0.01
SEMA4D-221ENST00000537934 UNC13BO14795 1591 aa15.11■□□□□ 0.01
SEMA4D-221ENST00000537934 FAM135AQ9P2D6 1515 aa15.11■□□□□ 0.01
SEMA4D-221ENST00000537934 KDM5CP41229 1560 aa15.11■□□□□ 0.01
SEMA4D-221ENST00000537934 NUDCQ9Y266 331 aa15.1■□□□□ 0.01
SEMA4D-221ENST00000537934 PDE4AP27815 886 aa15.09■□□□□ 0.01
SEMA4D-221ENST00000537934 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
SEMA4D-221ENST00000537934 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0.01
SEMA4D-221ENST00000537934 KIF13AQ9H1H9 1805 aa15.08■□□□□ 0
SEMA4D-221ENST00000537934 BACH2Q9BYV9 841 aa15.08■□□□□ 0
SEMA4D-221ENST00000537934 HSPA5P11021 654 aaKnown RBP15.07■□□□□ 0
SEMA4D-221ENST00000537934 HECW2Q9P2P5 1572 aa15.07■□□□□ 0
SEMA4D-221ENST00000537934 MAGI2Q86UL8 1455 aa15.07■□□□□ 0
SEMA4D-221ENST00000537934 RPRD2Q5VT52 1461 aaKnown RBP15.06■□□□□ 0
SEMA4D-221ENST00000537934 MS4A1P11836 297 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 NFKBIBQ15653 356 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 DDRGK1Q96HY6 314 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 MLH3Q9UHC1 1453 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 RICTORQ6R327 1708 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 KIF3BO15066 747 aa15.06■□□□□ 0
SEMA4D-221ENST00000537934 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
SEMA4D-221ENST00000537934 IQGAP3Q86VI3 1631 aa15.05■□□□□ 0
SEMA4D-221ENST00000537934 ABCA6Q8N139 1617 aa15.04■□□□□ -0
SEMA4D-221ENST00000537934 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
SEMA4D-221ENST00000537934 A2MP01023 1474 aa15.03■□□□□ -0
SEMA4D-221ENST00000537934 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
SEMA4D-221ENST00000537934 ZMYND15Q9H091 742 aa15.02■□□□□ -0
SEMA4D-221ENST00000537934 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
SEMA4D-221ENST00000537934 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
SEMA4D-221ENST00000537934 EIF4G2P78344 907 aaKnown RBP eCLIP15.01□□□□□ -0.01
SEMA4D-221ENST00000537934 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
SEMA4D-221ENST00000537934 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
SEMA4D-221ENST00000537934 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
SEMA4D-221ENST00000537934 MROH1Q8NDA8 1641 aa15□□□□□ -0.01
SEMA4D-221ENST00000537934 DIP2CQ9Y2E4 1556 aa14.99□□□□□ -0.01
SEMA4D-221ENST00000537934 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
SEMA4D-221ENST00000537934 PLA2R1Q13018 1463 aa14.98□□□□□ -0.01
SEMA4D-221ENST00000537934 PODXL2Q9NZ53 605 aa14.98□□□□□ -0.01
SEMA4D-221ENST00000537934 VSIG10Q8N0Z9 540 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms