RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 IQGAP3Q86VI3 1631 aa18.14■□□□□ 0.49
DDB1-209ENST00000537877 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
DDB1-209ENST00000537877 COL17A1Q9UMD9 1497 aaPredicted RBP18.12■□□□□ 0.49
DDB1-209ENST00000537877 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
DDB1-209ENST00000537877 RNF17Q9BXT8 1623 aaKnown RBP18.12■□□□□ 0.49
DDB1-209ENST00000537877 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
DDB1-209ENST00000537877 ARHGEF40Q8TER5 1519 aa18.11■□□□□ 0.49
DDB1-209ENST00000537877 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
DDB1-209ENST00000537877 NUP155O75694 1391 aa18.11■□□□□ 0.49
DDB1-209ENST00000537877 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
DDB1-209ENST00000537877 FAM135AQ9P2D6 1515 aa18.1■□□□□ 0.49
DDB1-209ENST00000537877 MROH1Q8NDA8 1641 aa18.08■□□□□ 0.48
DDB1-209ENST00000537877 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
DDB1-209ENST00000537877 SLC4A1APQ9BWU0 796 aaKnown RBP18.07■□□□□ 0.48
DDB1-209ENST00000537877 ATP10AO60312 1499 aa18.07■□□□□ 0.48
DDB1-209ENST00000537877 KANK1Q14678 1352 aa18.05■□□□□ 0.48
DDB1-209ENST00000537877 AGLP35573 1532 aa18.04■□□□□ 0.48
DDB1-209ENST00000537877 KIF3BO15066 747 aa18.04■□□□□ 0.48
DDB1-209ENST00000537877 TET3O43151 1660 aa18.03■□□□□ 0.48
DDB1-209ENST00000537877 LMTK2Q8IWU2 1503 aa18.01■□□□□ 0.47
DDB1-209ENST00000537877 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.01■□□□□ 0.472e-7■■□□□ 13.1
DDB1-209ENST00000537877 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
DDB1-209ENST00000537877 PKD2Q13563 968 aa18■□□□□ 0.47
DDB1-209ENST00000537877 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
DDB1-209ENST00000537877 CEP152O94986 1710 aa17.97■□□□□ 0.47
DDB1-209ENST00000537877 E9PCH4 1651 aa17.96■□□□□ 0.47
DDB1-209ENST00000537877 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
DDB1-209ENST00000537877 TIMELESSQ9UNS1 1208 aa17.95■□□□□ 0.46
DDB1-209ENST00000537877 ABCC3O15438 1527 aa17.95■□□□□ 0.46
DDB1-209ENST00000537877 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
DDB1-209ENST00000537877 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
DDB1-209ENST00000537877 FOXD1Q16676 465 aa17.94■□□□□ 0.46
DDB1-209ENST00000537877 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
DDB1-209ENST00000537877 CAMSAP1Q5T5Y3 1602 aa17.92■□□□□ 0.46
DDB1-209ENST00000537877 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
DDB1-209ENST00000537877 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
DDB1-209ENST00000537877 GGT6Q6P531 493 aa17.91■□□□□ 0.46
DDB1-209ENST00000537877 TONSLQ96HA7 1378 aa17.89■□□□□ 0.45
DDB1-209ENST00000537877 TRPM2O94759 1503 aa17.89■□□□□ 0.45
DDB1-209ENST00000537877 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
DDB1-209ENST00000537877 PLA2R1Q13018 1463 aa17.87■□□□□ 0.45
DDB1-209ENST00000537877 PTPRTO14522 1441 aa17.87■□□□□ 0.45
DDB1-209ENST00000537877 WASHC2CQ9Y4E1 1318 aa17.86■□□□□ 0.45
DDB1-209ENST00000537877 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
DDB1-209ENST00000537877 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
DDB1-209ENST00000537877 NPATQ14207 1427 aa17.84■□□□□ 0.45
DDB1-209ENST00000537877 CLTCQ00610 1675 aaKnown RBP17.82■□□□□ 0.44
DDB1-209ENST00000537877 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
DDB1-209ENST00000537877 CLTCL1P53675 1640 aa17.81■□□□□ 0.44
DDB1-209ENST00000537877 NEURL4Q96JN8 1562 aa17.8■□□□□ 0.44
DDB1-209ENST00000537877 MROH2AA6NES4 1674 aa17.79■□□□□ 0.44
DDB1-209ENST00000537877 PREX1Q8TCU6 1659 aa17.78■□□□□ 0.44
DDB1-209ENST00000537877 NOS1P29475 1434 aa17.78■□□□□ 0.44
DDB1-209ENST00000537877 ARID4BQ4LE39 1312 aaPredicted RBP17.77■□□□□ 0.44
DDB1-209ENST00000537877 PPP1R15AO75807 674 aaPredicted RBP17.76■□□□□ 0.43
DDB1-209ENST00000537877 SYNMO15061 1565 aa17.75■□□□□ 0.43
DDB1-209ENST00000537877 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
DDB1-209ENST00000537877 MLECQ14165 292 aa17.74■□□□□ 0.43
DDB1-209ENST00000537877 L3MBTL2Q969R5 705 aa17.74■□□□□ 0.43
DDB1-209ENST00000537877 KIF1BO60333 1816 aa17.74■□□□□ 0.43
DDB1-209ENST00000537877 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
DDB1-209ENST00000537877 SPATA31E1Q6ZUB1 1445 aa17.73■□□□□ 0.43
DDB1-209ENST00000537877 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
DDB1-209ENST00000537877 FER1L4A9Z1Z3 1794 aa17.72■□□□□ 0.43
DDB1-209ENST00000537877 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
DDB1-209ENST00000537877 UGGT1Q9NYU2 1555 aa17.72■□□□□ 0.43
DDB1-209ENST00000537877 ADGRB3O60242 1522 aa17.71■□□□□ 0.43
DDB1-209ENST00000537877 CFAP65Q6ZU64 1925 aaKnown RBP17.7■□□□□ 0.42
DDB1-209ENST00000537877 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
DDB1-209ENST00000537877 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
DDB1-209ENST00000537877 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
DDB1-209ENST00000537877 IFT172Q9UG01 1749 aa17.65■□□□□ 0.42
DDB1-209ENST00000537877 ADAMTSL3P82987 1691 aa17.65■□□□□ 0.42
DDB1-209ENST00000537877 C3P01024 1663 aa17.64■□□□□ 0.41
DDB1-209ENST00000537877 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
DDB1-209ENST00000537877 MADDQ8WXG6 1647 aa17.64■□□□□ 0.41
DDB1-209ENST00000537877 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
DDB1-209ENST00000537877 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
DDB1-209ENST00000537877 MYOM2P54296 1465 aa17.62■□□□□ 0.41
DDB1-209ENST00000537877 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
DDB1-209ENST00000537877 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
DDB1-209ENST00000537877 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
DDB1-209ENST00000537877 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
DDB1-209ENST00000537877 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
DDB1-209ENST00000537877 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
DDB1-209ENST00000537877 PPLO60437 1756 aa17.59■□□□□ 0.41
DDB1-209ENST00000537877 NBPF8Q3BBV2 869 aa17.59■□□□□ 0.41
DDB1-209ENST00000537877 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
DDB1-209ENST00000537877 TNRQ92752 1358 aa17.58■□□□□ 0.41
DDB1-209ENST00000537877 IDI1Q13907 227 aa17.57■□□□□ 0.4
DDB1-209ENST00000537877 RPGRIP1LQ68CZ1 1315 aa17.57■□□□□ 0.4
DDB1-209ENST00000537877 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
DDB1-209ENST00000537877 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
DDB1-209ENST00000537877 NEXMIFQ5QGS0 1516 aa17.56■□□□□ 0.4
DDB1-209ENST00000537877 NLRP1Q9C000 1473 aa17.55■□□□□ 0.4
DDB1-209ENST00000537877 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
DDB1-209ENST00000537877 KIAA1210Q9ULL0 1709 aa17.55■□□□□ 0.4
DDB1-209ENST00000537877 LAMC1P11047 1609 aa17.55■□□□□ 0.4
DDB1-209ENST00000537877 NRXN1Q9ULB1 1477 aa17.55■□□□□ 0.4
DDB1-209ENST00000537877 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms