RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 FANCAO15360 1455 aa21.76■■□□□ 1.07
MKS1-204ENST00000537529 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
MKS1-204ENST00000537529 ASXL2Q76L83 1435 aa21.75■■□□□ 1.07
MKS1-204ENST00000537529 PLA2R1Q13018 1463 aa21.74■■□□□ 1.07
MKS1-204ENST00000537529 ATP10AO60312 1499 aa21.73■■□□□ 1.07
MKS1-204ENST00000537529 DCAF11Q8TEB1 546 aa21.72■■□□□ 1.07
MKS1-204ENST00000537529 ARID4BQ4LE39 1312 aaPredicted RBP21.71■■□□□ 1.07
MKS1-204ENST00000537529 CARD11Q9BXL7 1154 aa21.7■■□□□ 1.06
MKS1-204ENST00000537529 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
MKS1-204ENST00000537529 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
MKS1-204ENST00000537529 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
MKS1-204ENST00000537529 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
MKS1-204ENST00000537529 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
MKS1-204ENST00000537529 ADGRL1O94910 1474 aa21.68■■□□□ 1.06
MKS1-204ENST00000537529 PRAG1Q86YV5 1406 aa21.67■■□□□ 1.06
MKS1-204ENST00000537529 NPM1P06748 294 aaKnown RBP eCLIP21.66■■□□□ 1.06
MKS1-204ENST00000537529 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
MKS1-204ENST00000537529 DEPDC5O75140 1603 aa21.65■■□□□ 1.06
MKS1-204ENST00000537529 ROCK2O75116 1388 aaKnown RBP21.65■■□□□ 1.06
MKS1-204ENST00000537529 SCAPERQ9BY12 1400 aa21.65■■□□□ 1.06
MKS1-204ENST00000537529 A2MP01023 1474 aa21.65■■□□□ 1.06
MKS1-204ENST00000537529 TRPM1Q7Z4N2 1603 aa21.65■■□□□ 1.06
MKS1-204ENST00000537529 EIF2AK4Q9P2K8 1649 aaKnown RBP21.61■■□□□ 1.05
MKS1-204ENST00000537529 SUPT16HQ9Y5B9 1047 aaKnown RBP21.6■■□□□ 1.05
MKS1-204ENST00000537529 RGL3Q3MIN7 710 aa21.6■■□□□ 1.05
MKS1-204ENST00000537529 E9PCH4 1651 aa21.59■■□□□ 1.05
MKS1-204ENST00000537529 KANK1Q14678 1352 aa21.59■■□□□ 1.05
MKS1-204ENST00000537529 LAMC1P11047 1609 aa21.59■■□□□ 1.05
MKS1-204ENST00000537529 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
MKS1-204ENST00000537529 GPRASP1Q5JY77 1395 aa21.58■■□□□ 1.05
MKS1-204ENST00000537529 TRPM2O94759 1503 aa21.58■■□□□ 1.05
MKS1-204ENST00000537529 TET3O43151 1660 aa21.58■■□□□ 1.05
MKS1-204ENST00000537529 PELP1Q8IZL8 1130 aaKnown RBP21.57■■□□□ 1.04
MKS1-204ENST00000537529 DHX29Q7Z478 1369 aaKnown RBP21.57■■□□□ 1.04
MKS1-204ENST00000537529 VWDEQ8N2E2 1590 aa21.57■■□□□ 1.04
MKS1-204ENST00000537529 POLR3GLQ9BT43 218 aa21.57■■□□□ 1.04
MKS1-204ENST00000537529 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
MKS1-204ENST00000537529 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
MKS1-204ENST00000537529 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
MKS1-204ENST00000537529 PTPRTO14522 1441 aa21.55■■□□□ 1.04
MKS1-204ENST00000537529 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
MKS1-204ENST00000537529 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
MKS1-204ENST00000537529 SPHKAPQ2M3C7 1700 aa21.54■■□□□ 1.04
MKS1-204ENST00000537529 MRS2Q9HD23 443 aa21.52■■□□□ 1.04
MKS1-204ENST00000537529 CD109Q6YHK3 1445 aa21.52■■□□□ 1.04
MKS1-204ENST00000537529 KIDINS220Q9ULH0 1771 aa21.51■■□□□ 1.03
MKS1-204ENST00000537529 KIF3BO15066 747 aa21.51■■□□□ 1.03
MKS1-204ENST00000537529 CEP152O94986 1710 aa21.5■■□□□ 1.03
MKS1-204ENST00000537529 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
MKS1-204ENST00000537529 MROH1Q8NDA8 1641 aa21.5■■□□□ 1.03
MKS1-204ENST00000537529 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
MKS1-204ENST00000537529 CLTCL1P53675 1640 aa21.48■■□□□ 1.03
MKS1-204ENST00000537529 RNF17Q9BXT8 1623 aaKnown RBP21.48■■□□□ 1.03
MKS1-204ENST00000537529 NBPF1Q3BBV0 1214 aa21.48■■□□□ 1.03
MKS1-204ENST00000537529 STAC3Q96MF2 364 aa21.46■■□□□ 1.03
MKS1-204ENST00000537529 MADDQ8WXG6 1647 aa21.45■■□□□ 1.02
MKS1-204ENST00000537529 NEFLP07196 543 aa21.45■■□□□ 1.02
MKS1-204ENST00000537529 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
MKS1-204ENST00000537529 EFCAB6Q5THR3 1501 aa21.43■■□□□ 1.02
MKS1-204ENST00000537529 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
MKS1-204ENST00000537529 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
MKS1-204ENST00000537529 FAM9BQ8IZU0 186 aa21.43■■□□□ 1.02
MKS1-204ENST00000537529 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
MKS1-204ENST00000537529 LMTK2Q8IWU2 1503 aa21.42■■□□□ 1.02
MKS1-204ENST00000537529 KTN1Q86UP2 1357 aaKnown RBP21.42■■□□□ 1.02
MKS1-204ENST00000537529 NEO1Q92859 1461 aa21.42■■□□□ 1.02
MKS1-204ENST00000537529 FKBP8Q14318 412 aa21.4■■□□□ 1.02
MKS1-204ENST00000537529 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
MKS1-204ENST00000537529 TESK2Q96S53 571 aa21.36■■□□□ 1.01
MKS1-204ENST00000537529 FRMPD1Q5SYB0 1578 aa21.36■■□□□ 1.01
MKS1-204ENST00000537529 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
MKS1-204ENST00000537529 IQGAP1P46940 1657 aa21.35■■□□□ 1.01
MKS1-204ENST00000537529 RALBP1Q15311 655 aa21.35■■□□□ 1.01
MKS1-204ENST00000537529 DISP3Q9P2K9 1392 aa21.34■■□□□ 1.01
MKS1-204ENST00000537529 TMF1P82094 1093 aa21.34■■□□□ 1.01
MKS1-204ENST00000537529 CNGB1Q14028 1251 aaPredicted RBP21.33■■□□□ 1.01
MKS1-204ENST00000537529 ABCA6Q8N139 1617 aa21.33■■□□□ 1.01
MKS1-204ENST00000537529 MYOM2P54296 1465 aa21.33■■□□□ 1
MKS1-204ENST00000537529 KIAA1210Q9ULL0 1709 aa21.32■■□□□ 1
MKS1-204ENST00000537529 MYBBP1AQ9BQG0 1328 aaKnown RBP21.32■■□□□ 1
MKS1-204ENST00000537529 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
MKS1-204ENST00000537529 UGGT1Q9NYU2 1555 aa21.31■■□□□ 1
MKS1-204ENST00000537529 KIF1BO60333 1816 aa21.31■■□□□ 1
MKS1-204ENST00000537529 BRD4O60885 1362 aaPredicted RBP21.3■■□□□ 1
MKS1-204ENST00000537529 MAP3K4Q9Y6R4 1608 aa21.29■■□□□ 1
MKS1-204ENST00000537529 TMC1Q8TDI8 760 aa21.28■■□□□ 1
MKS1-204ENST00000537529 GLI2P10070 1586 aa21.27■■□□□ 1
MKS1-204ENST00000537529 EIF3AQ14152 1382 aaKnown RBP21.27■■□□□ 1
MKS1-204ENST00000537529 WASHC2CQ9Y4E1 1318 aa21.27■■□□□ 1
MKS1-204ENST00000537529 BCANQ96GW7 911 aa21.27■□□□□ 0.99
MKS1-204ENST00000537529 PARD3Q8TEW0 1356 aa21.26■□□□□ 0.99
MKS1-204ENST00000537529 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
MKS1-204ENST00000537529 ABCC3O15438 1527 aa21.25■□□□□ 0.99
MKS1-204ENST00000537529 ADGRB3O60242 1522 aa21.25■□□□□ 0.99
MKS1-204ENST00000537529 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
MKS1-204ENST00000537529 NPATQ14207 1427 aa21.25■□□□□ 0.99
MKS1-204ENST00000537529 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
MKS1-204ENST00000537529 MROH2AA6NES4 1674 aa21.24■□□□□ 0.99
MKS1-204ENST00000537529 PER1O15534 1290 aaPredicted RBP21.24■□□□□ 0.99
MKS1-204ENST00000537529 GGT6Q6P531 493 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms