RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 GPATCH8Q9UKJ3 1502 aaKnown RBP25.31■■□□□ 1.64
LPCAT3-206ENST00000537179 MED14O60244 1454 aa25.3■■□□□ 1.64
LPCAT3-206ENST00000537179 TNRQ92752 1358 aa25.3■■□□□ 1.64
LPCAT3-206ENST00000537179 LRRC7Q96NW7 1537 aa25.29■■□□□ 1.64
LPCAT3-206ENST00000537179 NPHP4O75161 1426 aaPredicted RBP25.29■■□□□ 1.64
LPCAT3-206ENST00000537179 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.64
LPCAT3-206ENST00000537179 CASKIN1Q8WXD9 1431 aa25.28■■□□□ 1.64
LPCAT3-206ENST00000537179 KIAA1107Q9UPP5 1409 aa25.28■■□□□ 1.64
LPCAT3-206ENST00000537179 PZPP20742 1482 aa25.27■■□□□ 1.64
LPCAT3-206ENST00000537179 PLEKHH2Q8IVE3 1493 aa25.27■■□□□ 1.64
LPCAT3-206ENST00000537179 SETD1AO15047 1707 aaKnown RBP25.26■■□□□ 1.63
LPCAT3-206ENST00000537179 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
LPCAT3-206ENST00000537179 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
LPCAT3-206ENST00000537179 UGGT1Q9NYU2 1555 aa25.24■■□□□ 1.63
LPCAT3-206ENST00000537179 ANKLE2Q86XL3 938 aa25.24■■□□□ 1.63
LPCAT3-206ENST00000537179 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
LPCAT3-206ENST00000537179 FBXO31Q5XUX0 539 aaPredicted RBP25.22■■□□□ 1.63
LPCAT3-206ENST00000537179 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
LPCAT3-206ENST00000537179 XIRP1Q702N8 1843 aaKnown RBP25.21■■□□□ 1.63
LPCAT3-206ENST00000537179 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.63
LPCAT3-206ENST00000537179 NLRP1Q9C000 1473 aa25.2■■□□□ 1.62
LPCAT3-206ENST00000537179 POTEAQ6S8J7 498 aa25.16■■□□□ 1.62
LPCAT3-206ENST00000537179 THEMISQ8N1K5 641 aaPredicted RBP25.16■■□□□ 1.62
LPCAT3-206ENST00000537179 FYCO1Q9BQS8 1478 aa25.15■■□□□ 1.62
LPCAT3-206ENST00000537179 MIA2Q96PC5 1412 aa25.13■■□□□ 1.61
LPCAT3-206ENST00000537179 CFDP1Q9UEE9 299 aaPredicted RBP25.12■■□□□ 1.61
LPCAT3-206ENST00000537179 DHX29Q7Z478 1369 aaKnown RBP25.11■■□□□ 1.61
LPCAT3-206ENST00000537179 RTEL1-TNFRSF6BF6WH68 1400 aa25.09■■□□□ 1.61
LPCAT3-206ENST00000537179 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
LPCAT3-206ENST00000537179 CCNB3Q8WWL7 1395 aa25.07■■□□□ 1.6
LPCAT3-206ENST00000537179 TIAM1Q13009 1591 aa25.06■■□□□ 1.6
LPCAT3-206ENST00000537179 UBR1Q8IWV7 1749 aa25.04■■□□□ 1.6
LPCAT3-206ENST00000537179 KIF3BO15066 747 aa25.04■■□□□ 1.6
LPCAT3-206ENST00000537179 ROBO1Q9Y6N7 1651 aa25.02■■□□□ 1.6
LPCAT3-206ENST00000537179 WASHC2CQ9Y4E1 1318 aa25.02■■□□□ 1.6
LPCAT3-206ENST00000537179 ZNF644Q9H582 1327 aaPredicted RBP25.01■■□□□ 1.59
LPCAT3-206ENST00000537179 FAM135BQ49AJ0 1406 aa25■■□□□ 1.59
LPCAT3-206ENST00000537179 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
LPCAT3-206ENST00000537179 CFAP65Q6ZU64 1925 aaKnown RBP24.94■■□□□ 1.58
LPCAT3-206ENST00000537179 ABCC3O15438 1527 aa24.94■■□□□ 1.58
LPCAT3-206ENST00000537179 ERVK-7P63135 1459 aa24.94■■□□□ 1.58
LPCAT3-206ENST00000537179 CCDC141Q6ZP82 1450 aa24.94■■□□□ 1.58
LPCAT3-206ENST00000537179 MTUS2Q5JR59 1369 aa24.91■■□□□ 1.58
LPCAT3-206ENST00000537179 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
LPCAT3-206ENST00000537179 CEP152O94986 1710 aa24.9■■□□□ 1.58
LPCAT3-206ENST00000537179 SLIT1O75093 1534 aa24.9■■□□□ 1.58
LPCAT3-206ENST00000537179 ARHGAP23Q9P227 1491 aa24.89■■□□□ 1.58
LPCAT3-206ENST00000537179 SRCAPQ6ZRS2 3230 aa24.89■■□□□ 1.58
LPCAT3-206ENST00000537179 PHLPP1O60346 1717 aa24.89■■□□□ 1.57
LPCAT3-206ENST00000537179 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
LPCAT3-206ENST00000537179 EHBP1L1Q8N3D4 1523 aa24.87■■□□□ 1.57
LPCAT3-206ENST00000537179 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
LPCAT3-206ENST00000537179 UPF1Q92900 1129 aaKnown RBP eCLIP24.85■■□□□ 1.57
LPCAT3-206ENST00000537179 MROH1Q8NDA8 1641 aa24.85■■□□□ 1.57
LPCAT3-206ENST00000537179 LRRC9Q6ZRR7 1453 aa24.84■■□□□ 1.57
LPCAT3-206ENST00000537179 LTKP29376 864 aa24.84■■□□□ 1.57
LPCAT3-206ENST00000537179 TMEM94Q12767 1356 aa24.83■■□□□ 1.57
LPCAT3-206ENST00000537179 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.56
LPCAT3-206ENST00000537179 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
LPCAT3-206ENST00000537179 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
LPCAT3-206ENST00000537179 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
LPCAT3-206ENST00000537179 TXNDC2Q86VQ3 553 aa24.78■■□□□ 1.56
LPCAT3-206ENST00000537179 PIK3C2BO00750 1634 aa24.78■■□□□ 1.56
LPCAT3-206ENST00000537179 COL16A1Q07092 1604 aaPredicted RBP24.78■■□□□ 1.56
LPCAT3-206ENST00000537179 JCADQ9P266 1359 aa24.77■■□□□ 1.56
LPCAT3-206ENST00000537179 LRP6O75581 1613 aa24.76■■□□□ 1.55
LPCAT3-206ENST00000537179 NWD1Q149M9 1564 aa24.74■■□□□ 1.55
LPCAT3-206ENST00000537179 PRDM15P57071 1507 aaPredicted RBP24.73■■□□□ 1.55
LPCAT3-206ENST00000537179 TRIM52Q96A61 297 aa24.71■■□□□ 1.55
LPCAT3-206ENST00000537179 MAST1Q9Y2H9 1570 aa24.71■■□□□ 1.55
LPCAT3-206ENST00000537179 NKTRP30414 1462 aaKnown RBP24.7■■□□□ 1.55
LPCAT3-206ENST00000537179 KDM5AP29375 1690 aaKnown RBP24.7■■□□□ 1.54
LPCAT3-206ENST00000537179 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
LPCAT3-206ENST00000537179 RBM33Q96EV2 1170 aaKnown RBP24.69■■□□□ 1.54
LPCAT3-206ENST00000537179 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
LPCAT3-206ENST00000537179 TET3O43151 1660 aa24.69■■□□□ 1.54
LPCAT3-206ENST00000537179 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
LPCAT3-206ENST00000537179 SHPRHQ149N8 1683 aa24.67■■□□□ 1.54
LPCAT3-206ENST00000537179 KCNA6P17658 529 aa24.67■■□□□ 1.54
LPCAT3-206ENST00000537179 PROSER2Q86WR7 435 aaPredicted RBP24.65■■□□□ 1.54
LPCAT3-206ENST00000537179 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
LPCAT3-206ENST00000537179 MSH6P52701 1360 aa24.64■■□□□ 1.53
LPCAT3-206ENST00000537179 EFCAB6Q5THR3 1501 aa24.63■■□□□ 1.53
LPCAT3-206ENST00000537179 ARHGAP31Q2M1Z3 1444 aa24.62■■□□□ 1.53
LPCAT3-206ENST00000537179 FGD6Q6ZV73 1430 aa24.62■■□□□ 1.53
LPCAT3-206ENST00000537179 TSPY4P0CV99 314 aa24.62■■□□□ 1.53
LPCAT3-206ENST00000537179 TSPY10P0CW01 314 aa24.62■■□□□ 1.53
LPCAT3-206ENST00000537179 CDK12Q9NYV4 1490 aaPredicted RBP24.62■■□□□ 1.53
LPCAT3-206ENST00000537179 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
LPCAT3-206ENST00000537179 MEX3CQ5U5Q3 659 aaKnown RBP24.6■■□□□ 1.53
LPCAT3-206ENST00000537179 SLAIN2Q9P270 581 aa24.6■■□□□ 1.53
LPCAT3-206ENST00000537179 CHD2O14647 1828 aaKnown RBP24.58■■□□□ 1.53
LPCAT3-206ENST00000537179 AHDC1Q5TGY3 1603 aaPredicted RBP24.58■■□□□ 1.53
LPCAT3-206ENST00000537179 SLC26A8Q96RN1 970 aa24.58■■□□□ 1.53
LPCAT3-206ENST00000537179 DUOX2Q9NRD8 1548 aa24.55■■□□□ 1.52
LPCAT3-206ENST00000537179 RXRBP28702 533 aa24.54■■□□□ 1.52
LPCAT3-206ENST00000537179 ADGRB3O60242 1522 aa24.52■■□□□ 1.52
LPCAT3-206ENST00000537179 DIP2AQ14689 1571 aa24.51■■□□□ 1.51
LPCAT3-206ENST00000537179 STAG3Q9UJ98 1225 aa24.51■■□□□ 1.51
LPCAT3-206ENST00000537179 RGS12O14924 1447 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms