RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
UBE3B-207ENST00000537063 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
UBE3B-207ENST00000537063 USP47Q96K76 1375 aa13.02□□□□□ -0.32
UBE3B-207ENST00000537063 VWDEQ8N2E2 1590 aa13.02□□□□□ -0.33
UBE3B-207ENST00000537063 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
UBE3B-207ENST00000537063 E9PCH4 1651 aa13.01□□□□□ -0.33
UBE3B-207ENST00000537063 ATP7AQ04656 1500 aa13.01□□□□□ -0.33
UBE3B-207ENST00000537063 ARID4BQ4LE39 1312 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-207ENST00000537063 FANCAO15360 1455 aa13□□□□□ -0.33
UBE3B-207ENST00000537063 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
UBE3B-207ENST00000537063 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
UBE3B-207ENST00000537063 ASXL2Q76L83 1435 aa12.99□□□□□ -0.33
UBE3B-207ENST00000537063 TET3O43151 1660 aa12.99□□□□□ -0.33
UBE3B-207ENST00000537063 A2MP01023 1474 aa12.99□□□□□ -0.33
UBE3B-207ENST00000537063 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
UBE3B-207ENST00000537063 CEP152O94986 1710 aa12.98□□□□□ -0.33
UBE3B-207ENST00000537063 SPHKAPQ2M3C7 1700 aa12.98□□□□□ -0.33
UBE3B-207ENST00000537063 TRPM2O94759 1503 aa12.98□□□□□ -0.33
UBE3B-207ENST00000537063 CFAP74Q9C0B2 1584 aa12.98□□□□□ -0.33
UBE3B-207ENST00000537063 MROH1Q8NDA8 1641 aa12.97□□□□□ -0.33
UBE3B-207ENST00000537063 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
UBE3B-207ENST00000537063 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
UBE3B-207ENST00000537063 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
UBE3B-207ENST00000537063 DHX29Q7Z478 1369 aaKnown RBP12.96□□□□□ -0.33
UBE3B-207ENST00000537063 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
UBE3B-207ENST00000537063 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
UBE3B-207ENST00000537063 PTPRTO14522 1441 aa12.95□□□□□ -0.34
UBE3B-207ENST00000537063 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
UBE3B-207ENST00000537063 PRKRIP1Q9H875 184 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-207ENST00000537063 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
UBE3B-207ENST00000537063 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
UBE3B-207ENST00000537063 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
UBE3B-207ENST00000537063 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
UBE3B-207ENST00000537063 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
UBE3B-207ENST00000537063 DCAF11Q8TEB1 546 aa12.91□□□□□ -0.34
UBE3B-207ENST00000537063 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
UBE3B-207ENST00000537063 AFAP1Q8N556 730 aa12.9□□□□□ -0.34
UBE3B-207ENST00000537063 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
UBE3B-207ENST00000537063 ZNF518AQ6AHZ1 1483 aa12.9□□□□□ -0.34
UBE3B-207ENST00000537063 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
UBE3B-207ENST00000537063 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
UBE3B-207ENST00000537063 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
UBE3B-207ENST00000537063 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
UBE3B-207ENST00000537063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBE3B-207ENST00000537063 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
UBE3B-207ENST00000537063 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
UBE3B-207ENST00000537063 COL17A1Q9UMD9 1497 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-207ENST00000537063 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
UBE3B-207ENST00000537063 POGZQ7Z3K3 1410 aa12.87□□□□□ -0.35
UBE3B-207ENST00000537063 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
UBE3B-207ENST00000537063 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
UBE3B-207ENST00000537063 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
UBE3B-207ENST00000537063 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
UBE3B-207ENST00000537063 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
UBE3B-207ENST00000537063 KDM2AQ9Y2K7 1162 aa12.86□□□□□ -0.35
UBE3B-207ENST00000537063 ST20-MTHFSA0A0A6YYL1 179 aa12.85□□□□□ -0.35
UBE3B-207ENST00000537063 KANK1Q14678 1352 aa12.84□□□□□ -0.35
UBE3B-207ENST00000537063 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.35
UBE3B-207ENST00000537063 CD109Q6YHK3 1445 aa12.83□□□□□ -0.36
UBE3B-207ENST00000537063 ABCA6Q8N139 1617 aa12.83□□□□□ -0.36
UBE3B-207ENST00000537063 MAP3K4Q9Y6R4 1608 aa12.83□□□□□ -0.36
UBE3B-207ENST00000537063 NEO1Q92859 1461 aa12.83□□□□□ -0.36
UBE3B-207ENST00000537063 KIF1BO60333 1816 aa12.82□□□□□ -0.36
UBE3B-207ENST00000537063 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
UBE3B-207ENST00000537063 MYOM2P54296 1465 aa12.82□□□□□ -0.36
UBE3B-207ENST00000537063 MROH2AA6NES4 1674 aa12.81□□□□□ -0.36
UBE3B-207ENST00000537063 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
UBE3B-207ENST00000537063 RICTORQ6R327 1708 aa12.8□□□□□ -0.36
UBE3B-207ENST00000537063 HNRNPUQ00839 825 aaKnown RBP eCLIP12.8□□□□□ -0.36
UBE3B-207ENST00000537063 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
UBE3B-207ENST00000537063 GLI2P10070 1586 aa12.8□□□□□ -0.36
UBE3B-207ENST00000537063 TESK2Q96S53 571 aa12.8□□□□□ -0.36
UBE3B-207ENST00000537063 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
UBE3B-207ENST00000537063 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBE3B-207ENST00000537063 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
UBE3B-207ENST00000537063 ADGRB3O60242 1522 aa12.78□□□□□ -0.36
UBE3B-207ENST00000537063 ZBED9Q6R2W3 1325 aa12.78□□□□□ -0.36
UBE3B-207ENST00000537063 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
UBE3B-207ENST00000537063 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
UBE3B-207ENST00000537063 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
UBE3B-207ENST00000537063 KIF3BO15066 747 aa12.77□□□□□ -0.37
UBE3B-207ENST00000537063 CAMSAP1Q5T5Y3 1602 aa12.76□□□□□ -0.37
UBE3B-207ENST00000537063 ZC3H13Q5T200 1668 aaKnown RBP12.76□□□□□ -0.37
UBE3B-207ENST00000537063 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
UBE3B-207ENST00000537063 PARD3Q8TEW0 1356 aa12.76□□□□□ -0.37
UBE3B-207ENST00000537063 MYO3AQ8NEV4 1616 aa12.76□□□□□ -0.37
UBE3B-207ENST00000537063 ABCC3O15438 1527 aa12.75□□□□□ -0.37
UBE3B-207ENST00000537063 MYOM1P52179 1685 aa12.75□□□□□ -0.37
UBE3B-207ENST00000537063 PPLO60437 1756 aa12.75□□□□□ -0.37
UBE3B-207ENST00000537063 BRD4O60885 1362 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-207ENST00000537063 SYNMO15061 1565 aa12.74□□□□□ -0.37
UBE3B-207ENST00000537063 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
UBE3B-207ENST00000537063 LRPPRCP42704 1394 aaKnown RBP12.74□□□□□ -0.37
UBE3B-207ENST00000537063 RALBP1Q15311 655 aa12.74□□□□□ -0.37
UBE3B-207ENST00000537063 SETBP1Q9Y6X0 1596 aa12.73□□□□□ -0.37
UBE3B-207ENST00000537063 WASHC2CQ9Y4E1 1318 aa12.73□□□□□ -0.37
UBE3B-207ENST00000537063 FKBP8Q14318 412 aa12.73□□□□□ -0.37
UBE3B-207ENST00000537063 SIGLEC1Q9BZZ2 1709 aa12.73□□□□□ -0.37
UBE3B-207ENST00000537063 PER1O15534 1290 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-207ENST00000537063 NPATQ14207 1427 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms