RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PLA2R1Q13018 1463 aa27.87■■■□□ 2.05
CCDC61-201ENST00000536603 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
CCDC61-201ENST00000536603 SPATA31D1Q6ZQQ2 1576 aa27.85■■■□□ 2.05
CCDC61-201ENST00000536603 RTEL1-TNFRSF6BF6WH68 1400 aa27.84■■■□□ 2.05
CCDC61-201ENST00000536603 UBAP1LF5GYI3 381 aa27.82■■■□□ 2.04
CCDC61-201ENST00000536603 PPARGC1BQ86YN6 1023 aaKnown RBP27.81■■■□□ 2.04
CCDC61-201ENST00000536603 DHX29Q7Z478 1369 aaKnown RBP27.81■■■□□ 2.04
CCDC61-201ENST00000536603 KIF3BO15066 747 aa27.8■■■□□ 2.04
CCDC61-201ENST00000536603 TCOF1Q13428 1488 aaKnown RBP27.8■■■□□ 2.04
CCDC61-201ENST00000536603 CCDC141Q6ZP82 1450 aa27.8■■■□□ 2.04
CCDC61-201ENST00000536603 A2ML1A8K2U0 1454 aa27.78■■■□□ 2.04
CCDC61-201ENST00000536603 TSPY4P0CV99 314 aa27.77■■■□□ 2.04
CCDC61-201ENST00000536603 TSPY10P0CW01 314 aa27.77■■■□□ 2.04
CCDC61-201ENST00000536603 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.04
CCDC61-201ENST00000536603 SOCS7O14512 581 aa27.76■■■□□ 2.03
CCDC61-201ENST00000536603 DNMT1P26358 1616 aaKnown RBP27.76■■■□□ 2.03
CCDC61-201ENST00000536603 ARHGEF5Q12774 1597 aa27.76■■■□□ 2.03
CCDC61-201ENST00000536603 PTPN23Q9H3S7 1636 aa27.74■■■□□ 2.03
CCDC61-201ENST00000536603 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
CCDC61-201ENST00000536603 FBXO31Q5XUX0 539 aaPredicted RBP27.73■■■□□ 2.03
CCDC61-201ENST00000536603 TNRQ92752 1358 aa27.73■■■□□ 2.03
CCDC61-201ENST00000536603 KDM5DQ9BY66 1539 aa27.72■■■□□ 2.03
CCDC61-201ENST00000536603 POLR1AO95602 1720 aaPredicted RBP27.7■■■□□ 2.03
CCDC61-201ENST00000536603 PZPP20742 1482 aa27.67■■■□□ 2.02
CCDC61-201ENST00000536603 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
CCDC61-201ENST00000536603 FAM50AQ14320 339 aaKnown RBP27.66■■■□□ 2.02
CCDC61-201ENST00000536603 FAM135AQ9P2D6 1515 aa27.66■■■□□ 2.02
CCDC61-201ENST00000536603 ABCC5O15440 1437 aa27.63■■■□□ 2.01
CCDC61-201ENST00000536603 ANKLE2Q86XL3 938 aa27.62■■■□□ 2.01
CCDC61-201ENST00000536603 THEMISQ8N1K5 641 aaPredicted RBP27.62■■■□□ 2.01
CCDC61-201ENST00000536603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.01
CCDC61-201ENST00000536603 NEURL4Q96JN8 1562 aa27.6■■■□□ 2.01
CCDC61-201ENST00000536603 PIP4K2BP78356 416 aa27.6■■■□□ 2.01
CCDC61-201ENST00000536603 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
CCDC61-201ENST00000536603 DAPK1P53355 1430 aa27.59■■■□□ 2.01
CCDC61-201ENST00000536603 CPS1P31327 1500 aa27.58■■■□□ 2.01
CCDC61-201ENST00000536603 UGGT1Q9NYU2 1555 aa27.58■■■□□ 2.01
CCDC61-201ENST00000536603 NLRP1Q9C000 1473 aa27.57■■■□□ 2
CCDC61-201ENST00000536603 SHANK2Q9UPX8 1470 aa27.57■■■□□ 2
CCDC61-201ENST00000536603 TOM1O60784 492 aa27.57■■■□□ 2
CCDC61-201ENST00000536603 CHIC2Q9UKJ5 165 aa27.55■■■□□ 2
CCDC61-201ENST00000536603 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
CCDC61-201ENST00000536603 NPHP4O75161 1426 aaPredicted RBP27.51■■□□□ 1.99
CCDC61-201ENST00000536603 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
CCDC61-201ENST00000536603 ZC3H13Q5T200 1668 aaKnown RBP27.5■■□□□ 1.99
CCDC61-201ENST00000536603 RNF17Q9BXT8 1623 aaKnown RBP27.5■■□□□ 1.99
CCDC61-201ENST00000536603 HSPA1LP34931 641 aa27.5■■□□□ 1.99
CCDC61-201ENST00000536603 DEPDC5O75140 1603 aa27.49■■□□□ 1.99
CCDC61-201ENST00000536603 ABCC3O15438 1527 aa27.47■■□□□ 1.99
CCDC61-201ENST00000536603 VWDEQ8N2E2 1590 aa27.47■■□□□ 1.99
CCDC61-201ENST00000536603 KIF15Q9NS87 1388 aa27.47■■□□□ 1.99
CCDC61-201ENST00000536603 IQGAP1P46940 1657 aa27.46■■□□□ 1.99
CCDC61-201ENST00000536603 EIF2AK4Q9P2K8 1649 aaKnown RBP27.46■■□□□ 1.99
CCDC61-201ENST00000536603 MED14O60244 1454 aa27.45■■□□□ 1.99
CCDC61-201ENST00000536603 ANKRD30AQ9BXX3 1397 aa27.45■■□□□ 1.98
CCDC61-201ENST00000536603 CFAP65Q6ZU64 1925 aaKnown RBP27.44■■□□□ 1.98
CCDC61-201ENST00000536603 DUOX2Q9NRD8 1548 aa27.44■■□□□ 1.98
CCDC61-201ENST00000536603 CEP152O94986 1710 aa27.43■■□□□ 1.98
CCDC61-201ENST00000536603 ITGAEP38570 1179 aa27.42■■□□□ 1.98
CCDC61-201ENST00000536603 ERVK-7P63135 1459 aa27.4■■□□□ 1.98
CCDC61-201ENST00000536603 MED1Q15648 1581 aaPredicted RBP27.39■■□□□ 1.97
CCDC61-201ENST00000536603 RRBP1Q9P2E9 1410 aaKnown RBP27.38■■□□□ 1.97
CCDC61-201ENST00000536603 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
CCDC61-201ENST00000536603 MROH1Q8NDA8 1641 aa27.37■■□□□ 1.97
CCDC61-201ENST00000536603 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
CCDC61-201ENST00000536603 ERBINQ96RT1 1412 aa27.35■■□□□ 1.97
CCDC61-201ENST00000536603 UBR1Q8IWV7 1749 aa27.34■■□□□ 1.97
CCDC61-201ENST00000536603 STRCP1A6NGW2 1772 aa27.33■■□□□ 1.97
CCDC61-201ENST00000536603 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
CCDC61-201ENST00000536603 LRRC7Q96NW7 1537 aa27.31■■□□□ 1.96
CCDC61-201ENST00000536603 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.3■■□□□ 1.96
CCDC61-201ENST00000536603 SYNMO15061 1565 aa27.3■■□□□ 1.96
CCDC61-201ENST00000536603 SCAF11Q99590 1463 aaKnown RBP27.29■■□□□ 1.96
CCDC61-201ENST00000536603 ROCK1Q13464 1354 aa27.28■■□□□ 1.96
CCDC61-201ENST00000536603 TXNDC2Q86VQ3 553 aa27.28■■□□□ 1.96
CCDC61-201ENST00000536603 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
CCDC61-201ENST00000536603 EID1Q9Y6B2 187 aa27.26■■□□□ 1.95
CCDC61-201ENST00000536603 ANKRD50Q9ULJ7 1429 aa27.25■■□□□ 1.95
CCDC61-201ENST00000536603 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
CCDC61-201ENST00000536603 PRDM15P57071 1507 aaPredicted RBP27.25■■□□□ 1.95
CCDC61-201ENST00000536603 KANK1Q14678 1352 aa27.24■■□□□ 1.95
CCDC61-201ENST00000536603 LTKP29376 864 aa27.23■■□□□ 1.95
CCDC61-201ENST00000536603 ARHGAP31Q2M1Z3 1444 aa27.23■■□□□ 1.95
CCDC61-201ENST00000536603 SLIT1O75093 1534 aa27.21■■□□□ 1.95
CCDC61-201ENST00000536603 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
CCDC61-201ENST00000536603 ARHGAP23Q9P227 1491 aa27.19■■□□□ 1.94
CCDC61-201ENST00000536603 TMEM2Q9UHN6 1383 aa27.13■■□□□ 1.93
CCDC61-201ENST00000536603 XIRP1Q702N8 1843 aaKnown RBP27.11■■□□□ 1.93
CCDC61-201ENST00000536603 EFCAB6Q5THR3 1501 aa27.11■■□□□ 1.93
CCDC61-201ENST00000536603 IDI1Q13907 227 aa27.09■■□□□ 1.93
CCDC61-201ENST00000536603 KDM5AP29375 1690 aaKnown RBP27.08■■□□□ 1.92
CCDC61-201ENST00000536603 BCANQ96GW7 911 aa27.06■■□□□ 1.92
CCDC61-201ENST00000536603 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
CCDC61-201ENST00000536603 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
CCDC61-201ENST00000536603 NAIPQ13075 1403 aa27.05■■□□□ 1.92
CCDC61-201ENST00000536603 UNC13BO14795 1591 aa27.03■■□□□ 1.92
CCDC61-201ENST00000536603 TMEM94Q12767 1356 aa27.02■■□□□ 1.92
CCDC61-201ENST00000536603 KCNA6P17658 529 aa27.02■■□□□ 1.92
CCDC61-201ENST00000536603 PROSER2Q86WR7 435 aaPredicted RBP27.02■■□□□ 1.92
CCDC61-201ENST00000536603 NUP155O75694 1391 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms