RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
LMO3-213ENST00000536172 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
LMO3-213ENST00000536172 ARHGEF5Q12774 1597 aa17.71■□□□□ 0.43
LMO3-213ENST00000536172 POLR1AO95602 1720 aaPredicted RBP17.71■□□□□ 0.43
LMO3-213ENST00000536172 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
LMO3-213ENST00000536172 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
LMO3-213ENST00000536172 PZPP20742 1482 aa17.7■□□□□ 0.42
LMO3-213ENST00000536172 KIF3BO15066 747 aa17.7■□□□□ 0.42
LMO3-213ENST00000536172 TNRQ92752 1358 aa17.68■□□□□ 0.42
LMO3-213ENST00000536172 TSPY4P0CV99 314 aa17.68■□□□□ 0.42
LMO3-213ENST00000536172 TSPY10P0CW01 314 aa17.68■□□□□ 0.42
LMO3-213ENST00000536172 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
LMO3-213ENST00000536172 NLRP1Q9C000 1473 aa17.65■□□□□ 0.42
LMO3-213ENST00000536172 UBAP1LF5GYI3 381 aa17.65■□□□□ 0.42
LMO3-213ENST00000536172 CPS1P31327 1500 aa17.64■□□□□ 0.41
LMO3-213ENST00000536172 SOCS7O14512 581 aa17.64■□□□□ 0.41
LMO3-213ENST00000536172 ZC3H13Q5T200 1668 aaKnown RBP17.64■□□□□ 0.41
LMO3-213ENST00000536172 LRRC9Q6ZRR7 1453 aa17.63■□□□□ 0.41
LMO3-213ENST00000536172 MAST1Q9Y2H9 1570 aa17.63■□□□□ 0.41
LMO3-213ENST00000536172 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
LMO3-213ENST00000536172 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
LMO3-213ENST00000536172 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
LMO3-213ENST00000536172 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
LMO3-213ENST00000536172 FBXO31Q5XUX0 539 aaPredicted RBP17.62■□□□□ 0.41
LMO3-213ENST00000536172 ILDR2Q71H61 639 aa17.62■□□□□ 0.41
LMO3-213ENST00000536172 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
LMO3-213ENST00000536172 MAP3K1Q13233 1512 aa17.62■□□□□ 0.41
LMO3-213ENST00000536172 NEURL4Q96JN8 1562 aa17.62■□□□□ 0.41
LMO3-213ENST00000536172 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
LMO3-213ENST00000536172 DEPDC5O75140 1603 aa17.61■□□□□ 0.41
LMO3-213ENST00000536172 UGGT1Q9NYU2 1555 aa17.6■□□□□ 0.41
LMO3-213ENST00000536172 MED14O60244 1454 aa17.58■□□□□ 0.41
LMO3-213ENST00000536172 SHANK2Q9UPX8 1470 aa17.58■□□□□ 0.41
LMO3-213ENST00000536172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.56■□□□□ 0.4
LMO3-213ENST00000536172 TOM1O60784 492 aa17.56■□□□□ 0.4
LMO3-213ENST00000536172 ABCC3O15438 1527 aa17.56■□□□□ 0.4
LMO3-213ENST00000536172 MYOM3Q5VTT5 1437 aa17.55■□□□□ 0.4
LMO3-213ENST00000536172 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
LMO3-213ENST00000536172 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
LMO3-213ENST00000536172 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
LMO3-213ENST00000536172 DUOX2Q9NRD8 1548 aa17.52■□□□□ 0.4
LMO3-213ENST00000536172 ERVK-7P63135 1459 aa17.51■□□□□ 0.39
LMO3-213ENST00000536172 MROH1Q8NDA8 1641 aa17.5■□□□□ 0.39
LMO3-213ENST00000536172 CEP152O94986 1710 aa17.5■□□□□ 0.39
LMO3-213ENST00000536172 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
LMO3-213ENST00000536172 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
LMO3-213ENST00000536172 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
LMO3-213ENST00000536172 KANK4Q5T7N3 995 aaPredicted RBP17.48■□□□□ 0.39
LMO3-213ENST00000536172 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
LMO3-213ENST00000536172 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
LMO3-213ENST00000536172 SYNMO15061 1565 aa17.47■□□□□ 0.39
LMO3-213ENST00000536172 PRDM15P57071 1507 aaPredicted RBP17.47■□□□□ 0.39
LMO3-213ENST00000536172 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
LMO3-213ENST00000536172 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
LMO3-213ENST00000536172 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
LMO3-213ENST00000536172 HSPA1LP34931 641 aa17.45■□□□□ 0.38
LMO3-213ENST00000536172 KIF15Q9NS87 1388 aa17.44■□□□□ 0.38
LMO3-213ENST00000536172 APLP2Q06481 763 aa17.44■□□□□ 0.38
LMO3-213ENST00000536172 PTPN23Q9H3S7 1636 aa17.43■□□□□ 0.38
LMO3-213ENST00000536172 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
LMO3-213ENST00000536172 STRCP1A6NGW2 1772 aa17.43■□□□□ 0.38
LMO3-213ENST00000536172 SLIT1O75093 1534 aa17.42■□□□□ 0.38
LMO3-213ENST00000536172 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
LMO3-213ENST00000536172 KDM5AP29375 1690 aaKnown RBP17.42■□□□□ 0.38
LMO3-213ENST00000536172 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
LMO3-213ENST00000536172 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
LMO3-213ENST00000536172 KANK1Q14678 1352 aa17.4■□□□□ 0.38
LMO3-213ENST00000536172 ABCC5O15440 1437 aa17.4■□□□□ 0.38
LMO3-213ENST00000536172 ALKQ9UM73 1620 aa17.39■□□□□ 0.38
LMO3-213ENST00000536172 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
LMO3-213ENST00000536172 DAPK1P53355 1430 aa17.38■□□□□ 0.37
LMO3-213ENST00000536172 RRP7BPQ9NSQ0 103 aa17.38■□□□□ 0.37
LMO3-213ENST00000536172 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
LMO3-213ENST00000536172 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
LMO3-213ENST00000536172 FGD6Q6ZV73 1430 aa17.36■□□□□ 0.37
LMO3-213ENST00000536172 PIK3C2BO00750 1634 aa17.36■□□□□ 0.37
LMO3-213ENST00000536172 LMTK2Q8IWU2 1503 aa17.35■□□□□ 0.37
LMO3-213ENST00000536172 LTKP29376 864 aa17.34■□□□□ 0.37
LMO3-213ENST00000536172 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
LMO3-213ENST00000536172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.36
LMO3-213ENST00000536172 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
LMO3-213ENST00000536172 EFCAB6Q5THR3 1501 aa17.32■□□□□ 0.36
LMO3-213ENST00000536172 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
LMO3-213ENST00000536172 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
LMO3-213ENST00000536172 IDI1Q13907 227 aa17.27■□□□□ 0.36
LMO3-213ENST00000536172 SLC52A1Q9NWF4 448 aa17.27■□□□□ 0.36
LMO3-213ENST00000536172 NOS1P29475 1434 aa17.27■□□□□ 0.35
LMO3-213ENST00000536172 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
LMO3-213ENST00000536172 CHIC2Q9UKJ5 165 aa17.26■□□□□ 0.35
LMO3-213ENST00000536172 TET3O43151 1660 aa17.25■□□□□ 0.35
LMO3-213ENST00000536172 ADGRB3O60242 1522 aa17.25■□□□□ 0.35
LMO3-213ENST00000536172 FAM135BQ49AJ0 1406 aa17.24■□□□□ 0.35
LMO3-213ENST00000536172 KCNA6P17658 529 aa17.24■□□□□ 0.35
LMO3-213ENST00000536172 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
LMO3-213ENST00000536172 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
LMO3-213ENST00000536172 ANKRD50Q9ULJ7 1429 aa17.21■□□□□ 0.34
LMO3-213ENST00000536172 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
LMO3-213ENST00000536172 TMEM94Q12767 1356 aa17.2■□□□□ 0.34
LMO3-213ENST00000536172 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
LMO3-213ENST00000536172 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms