RNA–Protein interactions for RNA: ENST00000535681.1

NPTX1-202, Transcript of neuronal pentraxin 1, humanhuman

TSL 2

Gene NPTX1, Length 3,957 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-202ENST00000535681 SAMD9Q5K651 1589 aa12.71□□□□□ -0.37
NPTX1-202ENST00000535681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.71□□□□□ -0.38
NPTX1-202ENST00000535681 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.38
NPTX1-202ENST00000535681 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.38
NPTX1-202ENST00000535681 ANKRD30BQ9BXX2 1392 aa12.7□□□□□ -0.38
NPTX1-202ENST00000535681 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
NPTX1-202ENST00000535681 TMC1Q8TDI8 760 aa12.7□□□□□ -0.38
NPTX1-202ENST00000535681 KIAA1211Q6ZU35 1233 aa12.69□□□□□ -0.38
NPTX1-202ENST00000535681 LRRIQ1Q96JM4 1722 aa12.69□□□□□ -0.38
NPTX1-202ENST00000535681 PKD2Q13563 968 aa12.69□□□□□ -0.38
NPTX1-202ENST00000535681 AEBP2Q6ZN18 517 aaPredicted RBP12.69□□□□□ -0.38
NPTX1-202ENST00000535681 XRCC6P12956 609 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPTX1-202ENST00000535681 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
NPTX1-202ENST00000535681 RRP1P56182 461 aaKnown RBP12.68□□□□□ -0.38
NPTX1-202ENST00000535681 PAXIP1Q6ZW49 1069 aaPredicted RBP12.68□□□□□ -0.38
NPTX1-202ENST00000535681 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
NPTX1-202ENST00000535681 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
NPTX1-202ENST00000535681 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
NPTX1-202ENST00000535681 DAPK1P53355 1430 aa12.66□□□□□ -0.38
NPTX1-202ENST00000535681 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
NPTX1-202ENST00000535681 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
NPTX1-202ENST00000535681 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
NPTX1-202ENST00000535681 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
NPTX1-202ENST00000535681 ABCC5O15440 1437 aa12.65□□□□□ -0.38
NPTX1-202ENST00000535681 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
NPTX1-202ENST00000535681 RPRD2Q5VT52 1461 aaKnown RBP12.65□□□□□ -0.38
NPTX1-202ENST00000535681 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.39
NPTX1-202ENST00000535681 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 MRE11P49959 708 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 CARD11Q9BXL7 1154 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 RCAN3Q9UKA8 241 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 PRDM10Q9NQV6 1147 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 USP47Q96K76 1375 aa12.64□□□□□ -0.39
NPTX1-202ENST00000535681 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
NPTX1-202ENST00000535681 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
NPTX1-202ENST00000535681 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
NPTX1-202ENST00000535681 MSNP26038 577 aaKnown RBP12.62□□□□□ -0.39
NPTX1-202ENST00000535681 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
NPTX1-202ENST00000535681 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
NPTX1-202ENST00000535681 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
NPTX1-202ENST00000535681 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
NPTX1-202ENST00000535681 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
NPTX1-202ENST00000535681 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
NPTX1-202ENST00000535681 PRG4Q92954 1404 aaPredicted RBP12.6□□□□□ -0.39
NPTX1-202ENST00000535681 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
NPTX1-202ENST00000535681 IPO4Q8TEX9 1081 aaKnown RBP12.59□□□□□ -0.39
NPTX1-202ENST00000535681 SPATA31E1Q6ZUB1 1445 aa12.59□□□□□ -0.39
NPTX1-202ENST00000535681 GTF2E1P29083 439 aaPredicted RBP12.59□□□□□ -0.39
NPTX1-202ENST00000535681 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
NPTX1-202ENST00000535681 PLEKHD1A6NEE1 506 aa12.58□□□□□ -0.4
NPTX1-202ENST00000535681 NUP155O75694 1391 aa12.58□□□□□ -0.4
NPTX1-202ENST00000535681 PNISRQ8TF01 805 aaKnown RBP12.57□□□□□ -0.4
NPTX1-202ENST00000535681 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
NPTX1-202ENST00000535681 PLCD3Q8N3E9 789 aa12.57□□□□□ -0.4
NPTX1-202ENST00000535681 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
NPTX1-202ENST00000535681 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
NPTX1-202ENST00000535681 UPF2Q9HAU5 1272 aaKnown RBP12.56□□□□□ -0.4
NPTX1-202ENST00000535681 WDR62O43379 1518 aa12.56□□□□□ -0.4
NPTX1-202ENST00000535681 RGL3Q3MIN7 710 aa12.56□□□□□ -0.4
NPTX1-202ENST00000535681 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
NPTX1-202ENST00000535681 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
NPTX1-202ENST00000535681 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
NPTX1-202ENST00000535681 ANKRD30AQ9BXX3 1397 aa12.54□□□□□ -0.4
NPTX1-202ENST00000535681 KIAA1107Q9UPP5 1409 aa12.54□□□□□ -0.4
NPTX1-202ENST00000535681 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
NPTX1-202ENST00000535681 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
NPTX1-202ENST00000535681 PZPP20742 1482 aa12.53□□□□□ -0.4
NPTX1-202ENST00000535681 NUP153P49790 1475 aaKnown RBP12.53□□□□□ -0.4
NPTX1-202ENST00000535681 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
NPTX1-202ENST00000535681 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
NPTX1-202ENST00000535681 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
NPTX1-202ENST00000535681 PLIN1O60240 522 aa12.52□□□□□ -0.4
NPTX1-202ENST00000535681 TRAK2O60296 914 aa12.52□□□□□ -0.4
NPTX1-202ENST00000535681 CRBNQ96SW2 442 aa12.52□□□□□ -0.4
NPTX1-202ENST00000535681 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
NPTX1-202ENST00000535681 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPTX1-202ENST00000535681 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
NPTX1-202ENST00000535681 KTN1Q86UP2 1357 aaKnown RBP12.52□□□□□ -0.41
NPTX1-202ENST00000535681 TARBP1Q13395 1621 aaKnown RBP12.52□□□□□ -0.41
NPTX1-202ENST00000535681 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
NPTX1-202ENST00000535681 CAMSAP2Q08AD1 1489 aa12.51□□□□□ -0.41
NPTX1-202ENST00000535681 CENPQQ7L2Z9 268 aaPredicted RBP12.51□□□□□ -0.41
NPTX1-202ENST00000535681 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
NPTX1-202ENST00000535681 KIF15Q9NS87 1388 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
NPTX1-202ENST00000535681 TROQ12816 1431 aaPredicted RBP12.5□□□□□ -0.41
NPTX1-202ENST00000535681 UQCRHLA0A096LP55 91 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 UQCRHP07919 91 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 JPH4Q96JJ6 628 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 MCM4P33991 863 aa12.5□□□□□ -0.41
NPTX1-202ENST00000535681 MYBBP1AQ9BQG0 1328 aaKnown RBP12.49□□□□□ -0.41
NPTX1-202ENST00000535681 PLB1Q6P1J6 1458 aa12.49□□□□□ -0.41
NPTX1-202ENST00000535681 DNMT1P26358 1616 aaKnown RBP12.49□□□□□ -0.41
NPTX1-202ENST00000535681 ERBB4Q15303 1308 aa12.49□□□□□ -0.41
NPTX1-202ENST00000535681 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
NPTX1-202ENST00000535681 ISY1Q9ULR0 285 aaKnown RBP12.49□□□□□ -0.41
NPTX1-202ENST00000535681 KIAA0586Q9BVV6 1533 aa12.49□□□□□ -0.41
NPTX1-202ENST00000535681 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms