RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 A0A0U1RQG5 324 aaPredicted RBP11.82□□□□□ -0.52
TNC-210ENST00000535648 KIF16BQ96L93 1317 aa11.82□□□□□ -0.52
TNC-210ENST00000535648 SLC4A10Q6U841 1118 aa11.81□□□□□ -0.52
TNC-210ENST00000535648 CCDC18Q5T9S5 1454 aa11.81□□□□□ -0.52
TNC-210ENST00000535648 G3V3G9 751 aa11.81□□□□□ -0.52
TNC-210ENST00000535648 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
TNC-210ENST00000535648 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
TNC-210ENST00000535648 GSE1Q14687 1217 aa11.8□□□□□ -0.52
TNC-210ENST00000535648 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
TNC-210ENST00000535648 KIF15Q9NS87 1388 aa11.8□□□□□ -0.52
TNC-210ENST00000535648 AEBP2Q6ZN18 517 aaPredicted RBP11.8□□□□□ -0.52
TNC-210ENST00000535648 NLRP13Q86W25 1043 aa11.8□□□□□ -0.52
TNC-210ENST00000535648 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
TNC-210ENST00000535648 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
TNC-210ENST00000535648 TNNT3P45378 269 aaPredicted RBP11.79□□□□□ -0.52
TNC-210ENST00000535648 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
TNC-210ENST00000535648 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
TNC-210ENST00000535648 TPM3P06753 285 aa11.79□□□□□ -0.52
TNC-210ENST00000535648 AMPHP49418 695 aa11.79□□□□□ -0.52
TNC-210ENST00000535648 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
TNC-210ENST00000535648 CHMP4CQ96CF2 233 aa11.78□□□□□ -0.52
TNC-210ENST00000535648 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
TNC-210ENST00000535648 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
TNC-210ENST00000535648 CEP89Q96ST8 783 aa11.78□□□□□ -0.52
TNC-210ENST00000535648 ARID3AQ99856 593 aa11.78□□□□□ -0.52
TNC-210ENST00000535648 CREBRFQ8IUR6 639 aa11.77□□□□□ -0.52
TNC-210ENST00000535648 SF3A1Q15459 793 aaKnown RBP11.77□□□□□ -0.53
TNC-210ENST00000535648 UACAQ9BZF9 1416 aa11.77□□□□□ -0.53
TNC-210ENST00000535648 KIF3BO15066 747 aa11.76□□□□□ -0.53
TNC-210ENST00000535648 NOL8Q76FK4 1167 aaKnown RBP11.76□□□□□ -0.53
TNC-210ENST00000535648 H3BQV1 296 aa11.76□□□□□ -0.53
TNC-210ENST00000535648 PDE4CQ08493 712 aa11.76□□□□□ -0.53
TNC-210ENST00000535648 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
TNC-210ENST00000535648 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
TNC-210ENST00000535648 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
TNC-210ENST00000535648 MARCH6O60337 910 aa11.75□□□□□ -0.53
TNC-210ENST00000535648 MYBBP1AQ9BQG0 1328 aaKnown RBP11.75□□□□□ -0.53
TNC-210ENST00000535648 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
TNC-210ENST00000535648 TOMM22Q9NS69 142 aa11.75□□□□□ -0.53
TNC-210ENST00000535648 WASHC2CQ9Y4E1 1318 aa11.74□□□□□ -0.53
TNC-210ENST00000535648 TPD52L1Q16890 204 aaPredicted RBP11.74□□□□□ -0.53
TNC-210ENST00000535648 CENPQQ7L2Z9 268 aaPredicted RBP11.74□□□□□ -0.53
TNC-210ENST00000535648 TSR1Q2NL82 804 aaKnown RBP11.74□□□□□ -0.53
TNC-210ENST00000535648 ATP6V1DQ9Y5K8 247 aa11.74□□□□□ -0.53
TNC-210ENST00000535648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNC-210ENST00000535648 PHF23Q9BUL5 403 aaPredicted RBP11.73□□□□□ -0.53
TNC-210ENST00000535648 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNC-210ENST00000535648 VPS53Q5VIR6 699 aa11.73□□□□□ -0.53
TNC-210ENST00000535648 TPM2P07951 284 aa11.73□□□□□ -0.53
TNC-210ENST00000535648 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
TNC-210ENST00000535648 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
TNC-210ENST00000535648 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
TNC-210ENST00000535648 LRRFIP1Q32MZ4 808 aaKnown RBP11.72□□□□□ -0.53
TNC-210ENST00000535648 GOLGA6L19H0YKK7 550 aa11.72□□□□□ -0.53
TNC-210ENST00000535648 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
TNC-210ENST00000535648 VSIG10Q8N0Z9 540 aa11.72□□□□□ -0.53
TNC-210ENST00000535648 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
TNC-210ENST00000535648 CCDC144AA2RUR9 1427 aa11.71□□□□□ -0.53
TNC-210ENST00000535648 RILPL2Q969X0 211 aa11.71□□□□□ -0.53
TNC-210ENST00000535648 AKAP17AQ02040 695 aaKnown RBP11.71□□□□□ -0.53
TNC-210ENST00000535648 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.53
TNC-210ENST00000535648 WIZO95785 1651 aa11.71□□□□□ -0.54
TNC-210ENST00000535648 TPM1P09493 284 aa11.71□□□□□ -0.54
TNC-210ENST00000535648 LTV1Q96GA3 475 aaPredicted RBP11.71□□□□□ -0.54
TNC-210ENST00000535648 PES1O00541 588 aaKnown RBP11.71□□□□□ -0.54
TNC-210ENST00000535648 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.54
TNC-210ENST00000535648 C1orf141Q5JVX7 400 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 ZBED9Q6R2W3 1325 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 FOXD4L5Q5VV16 416 aaPredicted RBP11.7□□□□□ -0.54
TNC-210ENST00000535648 FOXD4L4Q8WXT5 416 aaPredicted RBP11.7□□□□□ -0.54
TNC-210ENST00000535648 CGNL1Q0VF96 1302 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 ANKRD45Q5TZF3 282 aa11.7□□□□□ -0.54
TNC-210ENST00000535648 E9PSI1 815 aa11.69□□□□□ -0.54
TNC-210ENST00000535648 SETQ01105 290 aaPredicted RBP11.69□□□□□ -0.54
TNC-210ENST00000535648 CCDC70Q6NSX1 233 aa11.69□□□□□ -0.54
TNC-210ENST00000535648 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
TNC-210ENST00000535648 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
TNC-210ENST00000535648 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
TNC-210ENST00000535648 ZKSCAN2Q63HK3 967 aa11.68□□□□□ -0.54
TNC-210ENST00000535648 COG3Q96JB2 828 aa11.68□□□□□ -0.54
TNC-210ENST00000535648 TRAK1Q9UPV9 953 aa11.68□□□□□ -0.54
TNC-210ENST00000535648 EVC2Q86UK5 1308 aa11.68□□□□□ -0.54
TNC-210ENST00000535648 FHOD3Q2V2M9 1422 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 PKNOX2Q96KN3 472 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
TNC-210ENST00000535648 BECN2A8MW95 431 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 RUFY2Q8WXA3 655 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 PANK3Q9H999 370 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 RRP7AQ9Y3A4 280 aaKnown RBP11.67□□□□□ -0.54
TNC-210ENST00000535648 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
TNC-210ENST00000535648 MSH5O43196 834 aa11.67□□□□□ -0.54
TNC-210ENST00000535648 GPS2Q13227 327 aa11.66□□□□□ -0.54
TNC-210ENST00000535648 DIAPH3Q9NSV4 1193 aa11.66□□□□□ -0.54
TNC-210ENST00000535648 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
TNC-210ENST00000535648 ROCK1Q13464 1354 aa11.66□□□□□ -0.54
TNC-210ENST00000535648 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
TNC-210ENST00000535648 NEXNQ0ZGT2 675 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms