RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 ADGBQ8N7X0 1667 aa18.04■□□□□ 0.48
VAMP1-204ENST00000535180 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
VAMP1-204ENST00000535180 TNRQ92752 1358 aa18.03■□□□□ 0.48
VAMP1-204ENST00000535180 THEMISQ8N1K5 641 aaPredicted RBP18.02■□□□□ 0.48
VAMP1-204ENST00000535180 EEA1Q15075 1411 aa18.01■□□□□ 0.47
VAMP1-204ENST00000535180 XIRP1Q702N8 1843 aaKnown RBP18.01■□□□□ 0.47
VAMP1-204ENST00000535180 HNRNPMP52272 730 aaKnown RBP eCLIP17.99■□□□□ 0.47
VAMP1-204ENST00000535180 FBXO31Q5XUX0 539 aaPredicted RBP17.99■□□□□ 0.47
VAMP1-204ENST00000535180 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
VAMP1-204ENST00000535180 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
VAMP1-204ENST00000535180 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
VAMP1-204ENST00000535180 PZPP20742 1482 aa17.96■□□□□ 0.47
VAMP1-204ENST00000535180 FAM135AQ9P2D6 1515 aa17.96■□□□□ 0.47
VAMP1-204ENST00000535180 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
VAMP1-204ENST00000535180 UPF1Q92900 1129 aaKnown RBP eCLIP17.95■□□□□ 0.46
VAMP1-204ENST00000535180 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
VAMP1-204ENST00000535180 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
VAMP1-204ENST00000535180 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
VAMP1-204ENST00000535180 MIA2Q96PC5 1412 aa17.92■□□□□ 0.46
VAMP1-204ENST00000535180 CCDC18Q5T9S5 1454 aa17.91■□□□□ 0.46
VAMP1-204ENST00000535180 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
VAMP1-204ENST00000535180 GPATCH8Q9UKJ3 1502 aaKnown RBP17.91■□□□□ 0.46
VAMP1-204ENST00000535180 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
VAMP1-204ENST00000535180 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
VAMP1-204ENST00000535180 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
VAMP1-204ENST00000535180 DHX29Q7Z478 1369 aaKnown RBP17.85■□□□□ 0.45
VAMP1-204ENST00000535180 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
VAMP1-204ENST00000535180 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
VAMP1-204ENST00000535180 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
VAMP1-204ENST00000535180 KIF3BO15066 747 aa17.82■□□□□ 0.44
VAMP1-204ENST00000535180 UBTFP17480 764 aaKnown RBP17.82■□□□□ 0.44
VAMP1-204ENST00000535180 RTEL1-TNFRSF6BF6WH68 1400 aa17.81■□□□□ 0.44
VAMP1-204ENST00000535180 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
VAMP1-204ENST00000535180 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
VAMP1-204ENST00000535180 CFAP65Q6ZU64 1925 aaKnown RBP17.8■□□□□ 0.44
VAMP1-204ENST00000535180 SCAF11Q99590 1463 aaKnown RBP17.78■□□□□ 0.44
VAMP1-204ENST00000535180 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
VAMP1-204ENST00000535180 JCADQ9P266 1359 aa17.77■□□□□ 0.43
VAMP1-204ENST00000535180 ZNF772Q68DY9 489 aaPredicted RBP17.76■□□□□ 0.43
VAMP1-204ENST00000535180 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
VAMP1-204ENST00000535180 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
VAMP1-204ENST00000535180 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
VAMP1-204ENST00000535180 TMEM94Q12767 1356 aa17.74■□□□□ 0.43
VAMP1-204ENST00000535180 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
VAMP1-204ENST00000535180 ARHGAP23Q9P227 1491 aa17.72■□□□□ 0.43
VAMP1-204ENST00000535180 LTKP29376 864 aa17.72■□□□□ 0.43
VAMP1-204ENST00000535180 SLIT1O75093 1534 aa17.72■□□□□ 0.43
VAMP1-204ENST00000535180 MAP3K1Q13233 1512 aa17.72■□□□□ 0.43
VAMP1-204ENST00000535180 ZNF644Q9H582 1327 aaPredicted RBP17.72■□□□□ 0.43
VAMP1-204ENST00000535180 TXNDC2Q86VQ3 553 aa17.71■□□□□ 0.43
VAMP1-204ENST00000535180 FYCO1Q9BQS8 1478 aa17.7■□□□□ 0.42
VAMP1-204ENST00000535180 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
VAMP1-204ENST00000535180 LRP6O75581 1613 aa17.7■□□□□ 0.42
VAMP1-204ENST00000535180 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
VAMP1-204ENST00000535180 NCOA2Q15596 1464 aa17.69■□□□□ 0.42
VAMP1-204ENST00000535180 COL16A1Q07092 1604 aaPredicted RBP17.69■□□□□ 0.42
VAMP1-204ENST00000535180 RXRBP28702 533 aa17.69■□□□□ 0.42
VAMP1-204ENST00000535180 SPATA31A6Q5VVP1 1343 aa17.68■□□□□ 0.42
VAMP1-204ENST00000535180 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
VAMP1-204ENST00000535180 ABCC3O15438 1527 aa17.67■□□□□ 0.42
VAMP1-204ENST00000535180 KCNA6P17658 529 aa17.66■□□□□ 0.42
VAMP1-204ENST00000535180 SLAIN2Q9P270 581 aa17.66■□□□□ 0.42
VAMP1-204ENST00000535180 PROSER2Q86WR7 435 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-204ENST00000535180 EID1Q9Y6B2 187 aa17.65■□□□□ 0.42
VAMP1-204ENST00000535180 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
VAMP1-204ENST00000535180 SHPRHQ149N8 1683 aa17.64■□□□□ 0.42
VAMP1-204ENST00000535180 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.42
VAMP1-204ENST00000535180 PRDM15P57071 1507 aaPredicted RBP17.64■□□□□ 0.41
VAMP1-204ENST00000535180 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
VAMP1-204ENST00000535180 RBM33Q96EV2 1170 aaKnown RBP17.63■□□□□ 0.41
VAMP1-204ENST00000535180 CEP152O94986 1710 aa17.62■□□□□ 0.41
VAMP1-204ENST00000535180 MSH6P52701 1360 aa17.62■□□□□ 0.41
VAMP1-204ENST00000535180 CCDC141Q6ZP82 1450 aa17.62■□□□□ 0.41
VAMP1-204ENST00000535180 NKTRP30414 1462 aaKnown RBP17.6■□□□□ 0.41
VAMP1-204ENST00000535180 NWD1Q149M9 1564 aa17.59■□□□□ 0.41
VAMP1-204ENST00000535180 RSPH4AQ5TD94 716 aa17.59■□□□□ 0.41
VAMP1-204ENST00000535180 TET3O43151 1660 aa17.58■□□□□ 0.41
VAMP1-204ENST00000535180 PIK3C2BO00750 1634 aa17.58■□□□□ 0.4
VAMP1-204ENST00000535180 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
VAMP1-204ENST00000535180 MTUS2Q5JR59 1369 aa17.57■□□□□ 0.4
VAMP1-204ENST00000535180 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
VAMP1-204ENST00000535180 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
VAMP1-204ENST00000535180 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
VAMP1-204ENST00000535180 MROH1Q8NDA8 1641 aa17.55■□□□□ 0.4
VAMP1-204ENST00000535180 FOXD1Q16676 465 aa17.55■□□□□ 0.4
VAMP1-204ENST00000535180 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
VAMP1-204ENST00000535180 SLC26A8Q96RN1 970 aa17.54■□□□□ 0.4
VAMP1-204ENST00000535180 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
VAMP1-204ENST00000535180 CHD2O14647 1828 aaKnown RBP17.54■□□□□ 0.4
VAMP1-204ENST00000535180 RGS12O14924 1447 aa17.53■□□□□ 0.4
VAMP1-204ENST00000535180 ARHGEF5Q12774 1597 aa17.52■□□□□ 0.39
VAMP1-204ENST00000535180 SETBP1Q9Y6X0 1596 aa17.52■□□□□ 0.39
VAMP1-204ENST00000535180 AFF2P51816 1311 aa17.51■□□□□ 0.39
VAMP1-204ENST00000535180 DIP2AQ14689 1571 aa17.49■□□□□ 0.39
VAMP1-204ENST00000535180 ARHGAP31Q2M1Z3 1444 aa17.49■□□□□ 0.39
VAMP1-204ENST00000535180 EFCAB6Q5THR3 1501 aa17.49■□□□□ 0.39
VAMP1-204ENST00000535180 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
VAMP1-204ENST00000535180 NUTM2BA6NNL0 878 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-204ENST00000535180 NUTM2EB1AL46 878 aaPredicted RBP17.49■□□□□ 0.39
VAMP1-204ENST00000535180 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms