RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ZNF142P52746 1687 aaPredicted RBP29.59■■■□□ 2.33
NDUFS3-213ENST00000534716 MYO3AQ8NEV4 1616 aa29.58■■■□□ 2.33
NDUFS3-213ENST00000534716 CAMSAP1Q5T5Y3 1602 aa29.57■■■□□ 2.32
NDUFS3-213ENST00000534716 WASHC2CQ9Y4E1 1318 aa29.55■■■□□ 2.32
NDUFS3-213ENST00000534716 CEP170BQ9Y4F5 1589 aaPredicted RBP29.55■■■□□ 2.32
NDUFS3-213ENST00000534716 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
NDUFS3-213ENST00000534716 PZPP20742 1482 aa29.54■■■□□ 2.32
NDUFS3-213ENST00000534716 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
NDUFS3-213ENST00000534716 A2ML1A8K2U0 1454 aa29.5■■■□□ 2.31
NDUFS3-213ENST00000534716 EIF2AK4Q9P2K8 1649 aaKnown RBP29.49■■■□□ 2.31
NDUFS3-213ENST00000534716 PKD2Q13563 968 aa29.49■■■□□ 2.31
NDUFS3-213ENST00000534716 TCOF1Q13428 1488 aaKnown RBP29.48■■■□□ 2.31
NDUFS3-213ENST00000534716 SHANK2Q9UPX8 1470 aa29.48■■■□□ 2.31
NDUFS3-213ENST00000534716 FBXO31Q5XUX0 539 aaPredicted RBP29.48■■■□□ 2.31
NDUFS3-213ENST00000534716 ABCC5O15440 1437 aa29.47■■■□□ 2.31
NDUFS3-213ENST00000534716 TNRQ92752 1358 aa29.47■■■□□ 2.31
NDUFS3-213ENST00000534716 FGD6Q6ZV73 1430 aa29.46■■■□□ 2.31
NDUFS3-213ENST00000534716 PTPN23Q9H3S7 1636 aa29.46■■■□□ 2.31
NDUFS3-213ENST00000534716 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.31
NDUFS3-213ENST00000534716 DUOX2Q9NRD8 1548 aa29.45■■■□□ 2.31
NDUFS3-213ENST00000534716 DISP3Q9P2K9 1392 aa29.43■■■□□ 2.3
NDUFS3-213ENST00000534716 DNMT1P26358 1616 aaKnown RBP29.43■■■□□ 2.3
NDUFS3-213ENST00000534716 LTBP4Q8N2S1 1624 aa29.43■■■□□ 2.3
NDUFS3-213ENST00000534716 ABCC3O15438 1527 aa29.42■■■□□ 2.3
NDUFS3-213ENST00000534716 ZC3H13Q5T200 1668 aaKnown RBP29.4■■■□□ 2.3
NDUFS3-213ENST00000534716 DAPK1P53355 1430 aa29.4■■■□□ 2.3
NDUFS3-213ENST00000534716 MROH1Q8NDA8 1641 aa29.4■■■□□ 2.3
NDUFS3-213ENST00000534716 CROCC2H7BZ55 1655 aa29.4■■■□□ 2.3
NDUFS3-213ENST00000534716 KIF15Q9NS87 1388 aa29.39■■■□□ 2.3
NDUFS3-213ENST00000534716 NLRP1Q9C000 1473 aa29.39■■■□□ 2.3
NDUFS3-213ENST00000534716 ERBINQ96RT1 1412 aa29.37■■■□□ 2.29
NDUFS3-213ENST00000534716 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
NDUFS3-213ENST00000534716 ILDR2Q71H61 639 aa29.36■■■□□ 2.29
NDUFS3-213ENST00000534716 SOCS7O14512 581 aa29.35■■■□□ 2.29
NDUFS3-213ENST00000534716 RRP7BPQ9NSQ0 103 aa29.33■■■□□ 2.29
NDUFS3-213ENST00000534716 SPATA31D1Q6ZQQ2 1576 aa29.33■■■□□ 2.29
NDUFS3-213ENST00000534716 PRDM15P57071 1507 aaPredicted RBP29.31■■■□□ 2.28
NDUFS3-213ENST00000534716 THEMISQ8N1K5 641 aaPredicted RBP29.31■■■□□ 2.28
NDUFS3-213ENST00000534716 ERVK-7P63135 1459 aa29.29■■■□□ 2.28
NDUFS3-213ENST00000534716 ANKRD30AQ9BXX3 1397 aa29.28■■■□□ 2.28
NDUFS3-213ENST00000534716 ZNF335Q9H4Z2 1342 aaPredicted RBP29.28■■■□□ 2.28
NDUFS3-213ENST00000534716 UGGT1Q9NYU2 1555 aa29.28■■■□□ 2.28
NDUFS3-213ENST00000534716 ARHGAP31Q2M1Z3 1444 aa29.28■■■□□ 2.28
NDUFS3-213ENST00000534716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.27
NDUFS3-213ENST00000534716 DEPDC5O75140 1603 aa29.25■■■□□ 2.27
NDUFS3-213ENST00000534716 NEURL4Q96JN8 1562 aa29.25■■■□□ 2.27
NDUFS3-213ENST00000534716 ANKLE2Q86XL3 938 aa29.24■■■□□ 2.27
NDUFS3-213ENST00000534716 ADGRL2O95490 1459 aa29.23■■■□□ 2.27
NDUFS3-213ENST00000534716 CEP152O94986 1710 aa29.23■■■□□ 2.27
NDUFS3-213ENST00000534716 CHIC2Q9UKJ5 165 aa29.22■■■□□ 2.27
NDUFS3-213ENST00000534716 POLR1AO95602 1720 aaPredicted RBP29.22■■■□□ 2.27
NDUFS3-213ENST00000534716 MED14O60244 1454 aa29.21■■■□□ 2.27
NDUFS3-213ENST00000534716 KANK1Q14678 1352 aa29.18■■■□□ 2.26
NDUFS3-213ENST00000534716 LMTK2Q8IWU2 1503 aa29.17■■■□□ 2.26
NDUFS3-213ENST00000534716 VWDEQ8N2E2 1590 aa29.17■■■□□ 2.26
NDUFS3-213ENST00000534716 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
NDUFS3-213ENST00000534716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
NDUFS3-213ENST00000534716 NPHP4O75161 1426 aaPredicted RBP29.12■■■□□ 2.25
NDUFS3-213ENST00000534716 CPS1P31327 1500 aa29.1■■■□□ 2.25
NDUFS3-213ENST00000534716 UBR1Q8IWV7 1749 aa29.08■■■□□ 2.25
NDUFS3-213ENST00000534716 ANKRD50Q9ULJ7 1429 aa29.07■■■□□ 2.24
NDUFS3-213ENST00000534716 ARHGAP23Q9P227 1491 aa29.06■■■□□ 2.24
NDUFS3-213ENST00000534716 SLIT1O75093 1534 aa29.05■■■□□ 2.24
NDUFS3-213ENST00000534716 IQGAP1P46940 1657 aa29.04■■■□□ 2.24
NDUFS3-213ENST00000534716 UBAP1LF5GYI3 381 aa29.02■■■□□ 2.24
NDUFS3-213ENST00000534716 EFCAB6Q5THR3 1501 aa29.02■■■□□ 2.24
NDUFS3-213ENST00000534716 SCAF11Q99590 1463 aaKnown RBP29.01■■■□□ 2.23
NDUFS3-213ENST00000534716 NOS1P29475 1434 aa29.01■■■□□ 2.23
NDUFS3-213ENST00000534716 ROCK1Q13464 1354 aa29.01■■■□□ 2.23
NDUFS3-213ENST00000534716 CFAP65Q6ZU64 1925 aaKnown RBP29■■■□□ 2.23
NDUFS3-213ENST00000534716 LTKP29376 864 aa28.98■■■□□ 2.23
NDUFS3-213ENST00000534716 KDM5AP29375 1690 aaKnown RBP28.98■■■□□ 2.23
NDUFS3-213ENST00000534716 PIK3C2BO00750 1634 aa28.98■■■□□ 2.23
NDUFS3-213ENST00000534716 IDI1Q13907 227 aa28.97■■■□□ 2.23
NDUFS3-213ENST00000534716 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
NDUFS3-213ENST00000534716 TXNDC2Q86VQ3 553 aa28.96■■■□□ 2.23
NDUFS3-213ENST00000534716 TMEM2Q9UHN6 1383 aa28.96■■■□□ 2.23
NDUFS3-213ENST00000534716 SYNMO15061 1565 aa28.96■■■□□ 2.23
NDUFS3-213ENST00000534716 EID1Q9Y6B2 187 aa28.94■■■□□ 2.22
NDUFS3-213ENST00000534716 SLC52A1Q9NWF4 448 aa28.93■■■□□ 2.22
NDUFS3-213ENST00000534716 UNC13BO14795 1591 aa28.9■■■□□ 2.22
NDUFS3-213ENST00000534716 STAG3Q9UJ98 1225 aa28.9■■■□□ 2.22
NDUFS3-213ENST00000534716 TOM1O60784 492 aa28.89■■■□□ 2.22
NDUFS3-213ENST00000534716 TET3O43151 1660 aa28.88■■■□□ 2.21
NDUFS3-213ENST00000534716 ADGRB3O60242 1522 aa28.86■■■□□ 2.21
NDUFS3-213ENST00000534716 LRRC7Q96NW7 1537 aa28.86■■■□□ 2.21
NDUFS3-213ENST00000534716 STRCP1A6NGW2 1772 aa28.85■■■□□ 2.21
NDUFS3-213ENST00000534716 PPARGC1BQ86YN6 1023 aaKnown RBP28.83■■■□□ 2.21
NDUFS3-213ENST00000534716 GCC2Q8IWJ2 1684 aa28.81■■■□□ 2.2
NDUFS3-213ENST00000534716 IQGAP3Q86VI3 1631 aa28.79■■■□□ 2.2
NDUFS3-213ENST00000534716 ALKQ9UM73 1620 aa28.79■■■□□ 2.2
NDUFS3-213ENST00000534716 PIP4K2BP78356 416 aa28.77■■■□□ 2.2
NDUFS3-213ENST00000534716 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
NDUFS3-213ENST00000534716 ITGAEP38570 1179 aa28.76■■■□□ 2.19
NDUFS3-213ENST00000534716 NUP155O75694 1391 aa28.75■■■□□ 2.19
NDUFS3-213ENST00000534716 ZFYVE9O95405 1425 aa28.74■■■□□ 2.19
NDUFS3-213ENST00000534716 E9PCH4 1651 aa28.74■■■□□ 2.19
NDUFS3-213ENST00000534716 SCAF1Q9H7N4 1312 aaKnown RBP28.72■■■□□ 2.19
NDUFS3-213ENST00000534716 HSPA1LP34931 641 aa28.71■■■□□ 2.19
NDUFS3-213ENST00000534716 TMEM131LA2VDJ0 1609 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms