RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
GEN1-207ENST00000534669 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
GEN1-207ENST00000534669 GPATCH8Q9UKJ3 1502 aaKnown RBP11.74□□□□□ -0.53
GEN1-207ENST00000534669 INO80Q9ULG1 1556 aaPredicted RBP11.74□□□□□ -0.53
GEN1-207ENST00000534669 CAMSAP1Q5T5Y3 1602 aa11.74□□□□□ -0.53
GEN1-207ENST00000534669 PLXNC1O60486 1568 aa11.73□□□□□ -0.53
GEN1-207ENST00000534669 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
GEN1-207ENST00000534669 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
GEN1-207ENST00000534669 MYO3AQ8NEV4 1616 aa11.72□□□□□ -0.53
GEN1-207ENST00000534669 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
GEN1-207ENST00000534669 SPATA31D1Q6ZQQ2 1576 aa11.71□□□□□ -0.53
GEN1-207ENST00000534669 ATP7AQ04656 1500 aa11.71□□□□□ -0.53
GEN1-207ENST00000534669 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
GEN1-207ENST00000534669 HNRNPMP52272 730 aaKnown RBP eCLIP11.71□□□□□ -0.53
GEN1-207ENST00000534669 ZNF142P52746 1687 aaPredicted RBP11.71□□□□□ -0.54
GEN1-207ENST00000534669 ZMYM3Q14202 1370 aa11.69□□□□□ -0.54
GEN1-207ENST00000534669 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
GEN1-207ENST00000534669 NPATQ14207 1427 aa11.69□□□□□ -0.54
GEN1-207ENST00000534669 SPAG9O60271 1321 aaKnown RBP11.68□□□□□ -0.54
GEN1-207ENST00000534669 ZNF692Q9BU19 519 aaPredicted RBP11.68□□□□□ -0.54
GEN1-207ENST00000534669 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
GEN1-207ENST00000534669 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
GEN1-207ENST00000534669 A2MP01023 1474 aa11.68□□□□□ -0.54
GEN1-207ENST00000534669 PTPRKQ15262 1439 aa11.68□□□□□ -0.54
GEN1-207ENST00000534669 CEP170BQ9Y4F5 1589 aaPredicted RBP11.67□□□□□ -0.54
GEN1-207ENST00000534669 ZNF335Q9H4Z2 1342 aaPredicted RBP11.67□□□□□ -0.54
GEN1-207ENST00000534669 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
GEN1-207ENST00000534669 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
GEN1-207ENST00000534669 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
GEN1-207ENST00000534669 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
GEN1-207ENST00000534669 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
GEN1-207ENST00000534669 SOCS7O14512 581 aa11.65□□□□□ -0.54
GEN1-207ENST00000534669 TCOF1Q13428 1488 aaKnown RBP11.64□□□□□ -0.55
GEN1-207ENST00000534669 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
GEN1-207ENST00000534669 GGT6Q6P531 493 aa11.63□□□□□ -0.55
GEN1-207ENST00000534669 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
GEN1-207ENST00000534669 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
GEN1-207ENST00000534669 CCNB3Q8WWL7 1395 aa11.63□□□□□ -0.55
GEN1-207ENST00000534669 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
GEN1-207ENST00000534669 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
GEN1-207ENST00000534669 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
GEN1-207ENST00000534669 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
GEN1-207ENST00000534669 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
GEN1-207ENST00000534669 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
GEN1-207ENST00000534669 EHBP1L1Q8N3D4 1523 aa11.6□□□□□ -0.55
GEN1-207ENST00000534669 A2ML1A8K2U0 1454 aa11.58□□□□□ -0.56
GEN1-207ENST00000534669 UBAP1LF5GYI3 381 aa11.58□□□□□ -0.56
GEN1-207ENST00000534669 PKD2Q13563 968 aa11.57□□□□□ -0.56
GEN1-207ENST00000534669 FBXO31Q5XUX0 539 aaPredicted RBP11.57□□□□□ -0.56
GEN1-207ENST00000534669 CEP162Q5TB80 1403 aa11.56□□□□□ -0.56
GEN1-207ENST00000534669 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
GEN1-207ENST00000534669 CAMSAP2Q08AD1 1489 aa11.56□□□□□ -0.56
GEN1-207ENST00000534669 DHX29Q7Z478 1369 aaKnown RBP11.55□□□□□ -0.56
GEN1-207ENST00000534669 RTEL1-TNFRSF6BF6WH68 1400 aa11.55□□□□□ -0.56
GEN1-207ENST00000534669 SPDYE1Q8NFV5 336 aaPredicted RBP11.55□□□□□ -0.56
GEN1-207ENST00000534669 KDM5DQ9BY66 1539 aa11.55□□□□□ -0.56
GEN1-207ENST00000534669 VWDEQ8N2E2 1590 aa11.54□□□□□ -0.56
GEN1-207ENST00000534669 PZPP20742 1482 aa11.54□□□□□ -0.56
GEN1-207ENST00000534669 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
GEN1-207ENST00000534669 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
GEN1-207ENST00000534669 TNRQ92752 1358 aa11.54□□□□□ -0.56
GEN1-207ENST00000534669 CCDC141Q6ZP82 1450 aa11.53□□□□□ -0.56
GEN1-207ENST00000534669 KIF3BO15066 747 aa11.52□□□□□ -0.57
GEN1-207ENST00000534669 MED1Q15648 1581 aaPredicted RBP11.52□□□□□ -0.57
GEN1-207ENST00000534669 SHANK2Q9UPX8 1470 aa11.51□□□□□ -0.57
GEN1-207ENST00000534669 HSPA1LP34931 641 aa11.51□□□□□ -0.57
GEN1-207ENST00000534669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
GEN1-207ENST00000534669 CPS1P31327 1500 aa11.5□□□□□ -0.57
GEN1-207ENST00000534669 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
GEN1-207ENST00000534669 MROH1Q8NDA8 1641 aa11.49□□□□□ -0.57
GEN1-207ENST00000534669 RNF17Q9BXT8 1623 aaKnown RBP11.49□□□□□ -0.57
GEN1-207ENST00000534669 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
GEN1-207ENST00000534669 PIP4K2BP78356 416 aa11.49□□□□□ -0.57
GEN1-207ENST00000534669 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
GEN1-207ENST00000534669 FAM135AQ9P2D6 1515 aa11.49□□□□□ -0.57
GEN1-207ENST00000534669 DEPDC5O75140 1603 aa11.49□□□□□ -0.57
GEN1-207ENST00000534669 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
GEN1-207ENST00000534669 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
GEN1-207ENST00000534669 ABCC3O15438 1527 aa11.48□□□□□ -0.57
GEN1-207ENST00000534669 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
GEN1-207ENST00000534669 IQGAP1P46940 1657 aa11.48□□□□□ -0.57
GEN1-207ENST00000534669 CEP152O94986 1710 aa11.48□□□□□ -0.57
GEN1-207ENST00000534669 MED14O60244 1454 aa11.47□□□□□ -0.57
GEN1-207ENST00000534669 NPHP4O75161 1426 aaPredicted RBP11.47□□□□□ -0.57
GEN1-207ENST00000534669 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
GEN1-207ENST00000534669 ZC3H13Q5T200 1668 aaKnown RBP11.46□□□□□ -0.57
GEN1-207ENST00000534669 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
GEN1-207ENST00000534669 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
GEN1-207ENST00000534669 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
GEN1-207ENST00000534669 CLEC11AQ9Y240 323 aa11.45□□□□□ -0.58
GEN1-207ENST00000534669 UBR1Q8IWV7 1749 aa11.45□□□□□ -0.58
GEN1-207ENST00000534669 ERVK-7P63135 1459 aa11.44□□□□□ -0.58
GEN1-207ENST00000534669 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
GEN1-207ENST00000534669 LRRC7Q96NW7 1537 aa11.44□□□□□ -0.58
GEN1-207ENST00000534669 EIF2AK4Q9P2K8 1649 aaKnown RBP11.43□□□□□ -0.58
GEN1-207ENST00000534669 ANKLE2Q86XL3 938 aa11.43□□□□□ -0.58
GEN1-207ENST00000534669 LRRC9Q6ZRR7 1453 aa11.43□□□□□ -0.58
GEN1-207ENST00000534669 TOM1O60784 492 aa11.42□□□□□ -0.58
GEN1-207ENST00000534669 THEMISQ8N1K5 641 aaPredicted RBP11.42□□□□□ -0.58
GEN1-207ENST00000534669 SYNMO15061 1565 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms