RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 A2ML1A8K2U0 1454 aa19.96■□□□□ 0.79
USF1-211ENST00000534633 LRRC9Q6ZRR7 1453 aa19.96■□□□□ 0.79
USF1-211ENST00000534633 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
USF1-211ENST00000534633 POLR1AO95602 1720 aaPredicted RBP19.94■□□□□ 0.78
USF1-211ENST00000534633 KIF3BO15066 747 aa19.94■□□□□ 0.78
USF1-211ENST00000534633 PZPP20742 1482 aa19.92■□□□□ 0.78
USF1-211ENST00000534633 MAP3K1Q13233 1512 aa19.92■□□□□ 0.78
USF1-211ENST00000534633 MAST1Q9Y2H9 1570 aa19.91■□□□□ 0.78
USF1-211ENST00000534633 TSPY4P0CV99 314 aa19.9■□□□□ 0.78
USF1-211ENST00000534633 TSPY10P0CW01 314 aa19.9■□□□□ 0.78
USF1-211ENST00000534633 RNF17Q9BXT8 1623 aaKnown RBP19.9■□□□□ 0.78
USF1-211ENST00000534633 TNRQ92752 1358 aa19.89■□□□□ 0.77
USF1-211ENST00000534633 ZNF335Q9H4Z2 1342 aaPredicted RBP19.89■□□□□ 0.77
USF1-211ENST00000534633 ZC3H13Q5T200 1668 aaKnown RBP19.88■□□□□ 0.77
USF1-211ENST00000534633 EIF2AK4Q9P2K8 1649 aaKnown RBP19.88■□□□□ 0.77
USF1-211ENST00000534633 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
USF1-211ENST00000534633 FBXO31Q5XUX0 539 aaPredicted RBP19.86■□□□□ 0.77
USF1-211ENST00000534633 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
USF1-211ENST00000534633 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
USF1-211ENST00000534633 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
USF1-211ENST00000534633 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
USF1-211ENST00000534633 DISP3Q9P2K9 1392 aa19.83■□□□□ 0.76
USF1-211ENST00000534633 SPATA31D1Q6ZQQ2 1576 aa19.82■□□□□ 0.76
USF1-211ENST00000534633 ABCC3O15438 1527 aa19.81■□□□□ 0.76
USF1-211ENST00000534633 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
USF1-211ENST00000534633 UGGT1Q9NYU2 1555 aa19.81■□□□□ 0.76
USF1-211ENST00000534633 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
USF1-211ENST00000534633 MROH1Q8NDA8 1641 aa19.8■□□□□ 0.76
USF1-211ENST00000534633 CEP152O94986 1710 aa19.8■□□□□ 0.76
USF1-211ENST00000534633 CROCC2H7BZ55 1655 aa19.8■□□□□ 0.76
USF1-211ENST00000534633 CPS1P31327 1500 aa19.78■□□□□ 0.76
USF1-211ENST00000534633 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
USF1-211ENST00000534633 THEMISQ8N1K5 641 aaPredicted RBP19.78■□□□□ 0.76
USF1-211ENST00000534633 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
USF1-211ENST00000534633 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
USF1-211ENST00000534633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
USF1-211ENST00000534633 ANKLE2Q86XL3 938 aa19.76■□□□□ 0.75
USF1-211ENST00000534633 MED14O60244 1454 aa19.75■□□□□ 0.75
USF1-211ENST00000534633 IQGAP1P46940 1657 aa19.75■□□□□ 0.75
USF1-211ENST00000534633 ERVK-7P63135 1459 aa19.74■□□□□ 0.75
USF1-211ENST00000534633 SHANK2Q9UPX8 1470 aa19.74■□□□□ 0.75
USF1-211ENST00000534633 PTPN23Q9H3S7 1636 aa19.74■□□□□ 0.75
USF1-211ENST00000534633 VWDEQ8N2E2 1590 aa19.73■□□□□ 0.75
USF1-211ENST00000534633 UBR1Q8IWV7 1749 aa19.72■□□□□ 0.75
USF1-211ENST00000534633 PRDM15P57071 1507 aaPredicted RBP19.71■□□□□ 0.75
USF1-211ENST00000534633 NPHP4O75161 1426 aaPredicted RBP19.71■□□□□ 0.75
USF1-211ENST00000534633 ILDR2Q71H61 639 aa19.7■□□□□ 0.74
USF1-211ENST00000534633 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
USF1-211ENST00000534633 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
USF1-211ENST00000534633 ABCC5O15440 1437 aa19.68■□□□□ 0.74
USF1-211ENST00000534633 APLP2Q06481 763 aa19.68■□□□□ 0.74
USF1-211ENST00000534633 STRCP1A6NGW2 1772 aa19.66■□□□□ 0.74
USF1-211ENST00000534633 DAPK1P53355 1430 aa19.66■□□□□ 0.74
USF1-211ENST00000534633 ARHGAP31Q2M1Z3 1444 aa19.66■□□□□ 0.74
USF1-211ENST00000534633 FGD6Q6ZV73 1430 aa19.65■□□□□ 0.74
USF1-211ENST00000534633 TOM1O60784 492 aa19.64■□□□□ 0.73
USF1-211ENST00000534633 SYNMO15061 1565 aa19.63■□□□□ 0.73
USF1-211ENST00000534633 SOCS7O14512 581 aa19.63■□□□□ 0.73
USF1-211ENST00000534633 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
USF1-211ENST00000534633 SLIT1O75093 1534 aa19.61■□□□□ 0.73
USF1-211ENST00000534633 SCAF11Q99590 1463 aaKnown RBP19.61■□□□□ 0.73
USF1-211ENST00000534633 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
USF1-211ENST00000534633 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
USF1-211ENST00000534633 KDM5AP29375 1690 aaKnown RBP19.6■□□□□ 0.73
USF1-211ENST00000534633 PIK3C2BO00750 1634 aa19.6■□□□□ 0.73
USF1-211ENST00000534633 KANK1Q14678 1352 aa19.59■□□□□ 0.73
USF1-211ENST00000534633 ALKQ9UM73 1620 aa19.59■□□□□ 0.73
USF1-211ENST00000534633 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
USF1-211ENST00000534633 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
USF1-211ENST00000534633 LMTK2Q8IWU2 1503 aa19.57■□□□□ 0.72
USF1-211ENST00000534633 LRRC7Q96NW7 1537 aa19.57■□□□□ 0.72
USF1-211ENST00000534633 HSPA1LP34931 641 aa19.57■□□□□ 0.72
USF1-211ENST00000534633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.72
USF1-211ENST00000534633 ADGRL2O95490 1459 aa19.54■□□□□ 0.72
USF1-211ENST00000534633 MED1Q15648 1581 aaPredicted RBP19.53■□□□□ 0.72
USF1-211ENST00000534633 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
USF1-211ENST00000534633 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
USF1-211ENST00000534633 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
USF1-211ENST00000534633 LTKP29376 864 aa19.52■□□□□ 0.72
USF1-211ENST00000534633 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.72
USF1-211ENST00000534633 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
USF1-211ENST00000534633 TMEM2Q9UHN6 1383 aa19.5■□□□□ 0.71
USF1-211ENST00000534633 STAG3Q9UJ98 1225 aa19.48■□□□□ 0.71
USF1-211ENST00000534633 NOS1P29475 1434 aa19.48■□□□□ 0.71
USF1-211ENST00000534633 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
USF1-211ENST00000534633 IDI1Q13907 227 aa19.45■□□□□ 0.7
USF1-211ENST00000534633 RPRD2Q5VT52 1461 aaKnown RBP19.45■□□□□ 0.7
USF1-211ENST00000534633 TET3O43151 1660 aa19.45■□□□□ 0.7
USF1-211ENST00000534633 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
USF1-211ENST00000534633 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
USF1-211ENST00000534633 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
USF1-211ENST00000534633 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
USF1-211ENST00000534633 SLC52A1Q9NWF4 448 aa19.41■□□□□ 0.7
USF1-211ENST00000534633 UNC13BO14795 1591 aa19.4■□□□□ 0.7
USF1-211ENST00000534633 NWD1Q149M9 1564 aa19.38■□□□□ 0.69
USF1-211ENST00000534633 KCNA6P17658 529 aa19.36■□□□□ 0.69
USF1-211ENST00000534633 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
USF1-211ENST00000534633 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
USF1-211ENST00000534633 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
USF1-211ENST00000534633 TMEM94Q12767 1356 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms