RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 RNF17Q9BXT8 1623 aaKnown RBP33.11■■■□□ 2.89
LMNB2-206ENST00000534495 PTPRKQ15262 1439 aa33.11■■■□□ 2.89
LMNB2-206ENST00000534495 KDM5DQ9BY66 1539 aa33.1■■■□□ 2.89
LMNB2-206ENST00000534495 DUOX2Q9NRD8 1548 aa33.1■■■□□ 2.89
LMNB2-206ENST00000534495 STRCQ7RTU9 1775 aa33.06■■■□□ 2.88
LMNB2-206ENST00000534495 KIF15Q9NS87 1388 aa33.05■■■□□ 2.88
LMNB2-206ENST00000534495 WASHC2CQ9Y4E1 1318 aa33.04■■■□□ 2.88
LMNB2-206ENST00000534495 MYO3AQ8NEV4 1616 aa33.02■■■□□ 2.88
LMNB2-206ENST00000534495 MROH1Q8NDA8 1641 aa33.01■■■□□ 2.87
LMNB2-206ENST00000534495 RRP7BPQ9NSQ0 103 aa33■■■□□ 2.87
LMNB2-206ENST00000534495 ZNF142P52746 1687 aaPredicted RBP33■■■□□ 2.87
LMNB2-206ENST00000534495 PZPP20742 1482 aa32.99■■■□□ 2.87
LMNB2-206ENST00000534495 ZC3H13Q5T200 1668 aaKnown RBP32.98■■■□□ 2.87
LMNB2-206ENST00000534495 FAM50AQ14320 339 aaKnown RBP32.98■■■□□ 2.87
LMNB2-206ENST00000534495 ERBINQ96RT1 1412 aa32.98■■■□□ 2.87
LMNB2-206ENST00000534495 ANKRD30AQ9BXX3 1397 aa32.96■■■□□ 2.87
LMNB2-206ENST00000534495 CHIC2Q9UKJ5 165 aa32.96■■■□□ 2.87
LMNB2-206ENST00000534495 ABCC3O15438 1527 aa32.96■■■□□ 2.87
LMNB2-206ENST00000534495 NCOA1Q15788 1441 aa32.94■■■□□ 2.86
LMNB2-206ENST00000534495 CEP170BQ9Y4F5 1589 aaPredicted RBP32.93■■■□□ 2.86
LMNB2-206ENST00000534495 FBXO31Q5XUX0 539 aaPredicted RBP32.93■■■□□ 2.86
LMNB2-206ENST00000534495 ADGRL2O95490 1459 aa32.93■■■□□ 2.86
LMNB2-206ENST00000534495 CEP152O94986 1710 aa32.91■■■□□ 2.86
LMNB2-206ENST00000534495 DMRT2Q9Y5R5 561 aa32.9■■■□□ 2.86
LMNB2-206ENST00000534495 PRDM15P57071 1507 aaPredicted RBP32.9■■■□□ 2.86
LMNB2-206ENST00000534495 CAMSAP1Q5T5Y3 1602 aa32.9■■■□□ 2.86
LMNB2-206ENST00000534495 DEPDC5O75140 1603 aa32.89■■■□□ 2.86
LMNB2-206ENST00000534495 PPARGC1BQ86YN6 1023 aaKnown RBP32.89■■■□□ 2.86
LMNB2-206ENST00000534495 TNRQ92752 1358 aa32.88■■■□□ 2.85
LMNB2-206ENST00000534495 A2ML1A8K2U0 1454 aa32.86■■■□□ 2.85
LMNB2-206ENST00000534495 CFAP65Q6ZU64 1925 aaKnown RBP32.85■■■□□ 2.85
LMNB2-206ENST00000534495 ILDR1Q86SU0 546 aaPredicted RBP32.84■■■□□ 2.85
LMNB2-206ENST00000534495 PTPRTO14522 1441 aa32.83■■■□□ 2.85
LMNB2-206ENST00000534495 PLA2R1Q13018 1463 aa32.8■■■□□ 2.84
LMNB2-206ENST00000534495 SPATA31D1Q6ZQQ2 1576 aa32.8■■■□□ 2.84
LMNB2-206ENST00000534495 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.77■■■□□ 2.84
LMNB2-206ENST00000534495 ERVK-7P63135 1459 aa32.76■■■□□ 2.84
LMNB2-206ENST00000534495 NLRP1Q9C000 1473 aa32.76■■■□□ 2.84
LMNB2-206ENST00000534495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.835e-10■■■■□ 22.6
LMNB2-206ENST00000534495 VWDEQ8N2E2 1590 aa32.75■■■□□ 2.83
LMNB2-206ENST00000534495 ARHGAP31Q2M1Z3 1444 aa32.75■■■□□ 2.83
LMNB2-206ENST00000534495 KANK1Q14678 1352 aa32.74■■■□□ 2.83
LMNB2-206ENST00000534495 ANKRD50Q9ULJ7 1429 aa32.74■■■□□ 2.83
LMNB2-206ENST00000534495 NCKAP5LQ9HCH0 1330 aa32.74■■■□□ 2.83
LMNB2-206ENST00000534495 PKD2Q13563 968 aa32.72■■■□□ 2.83
LMNB2-206ENST00000534495 LMTK2Q8IWU2 1503 aa32.71■■■□□ 2.83
LMNB2-206ENST00000534495 ROCK1Q13464 1354 aa32.7■■■□□ 2.83
LMNB2-206ENST00000534495 UGGT1Q9NYU2 1555 aa32.68■■■□□ 2.82
LMNB2-206ENST00000534495 FBXO41Q8TF61 875 aa32.67■■■□□ 2.82
LMNB2-206ENST00000534495 CERKQ8TCT0 537 aa32.66■■■□□ 2.82
LMNB2-206ENST00000534495 POLR1AO95602 1720 aaPredicted RBP32.65■■■□□ 2.82
LMNB2-206ENST00000534495 RRBP1Q9P2E9 1410 aaKnown RBP32.64■■■□□ 2.82
LMNB2-206ENST00000534495 THEMISQ8N1K5 641 aaPredicted RBP32.63■■■□□ 2.81
LMNB2-206ENST00000534495 ITGAEP38570 1179 aa32.62■■■□□ 2.81
LMNB2-206ENST00000534495 EFCAB6Q5THR3 1501 aa32.6■■■□□ 2.81
LMNB2-206ENST00000534495 UNC13BO14795 1591 aa32.58■■■□□ 2.81
LMNB2-206ENST00000534495 NEURL4Q96JN8 1562 aa32.58■■■□□ 2.81
LMNB2-206ENST00000534495 UBR1Q8IWV7 1749 aa32.58■■■□□ 2.81
LMNB2-206ENST00000534495 LTBP4Q8N2S1 1624 aa32.58■■■□□ 2.81
LMNB2-206ENST00000534495 ANKLE2Q86XL3 938 aa32.54■■■□□ 2.8
LMNB2-206ENST00000534495 TET3O43151 1660 aa32.53■■■□□ 2.8
LMNB2-206ENST00000534495 SYNMO15061 1565 aa32.5■■■□□ 2.79
LMNB2-206ENST00000534495 NOS1P29475 1434 aa32.5■■■□□ 2.79
LMNB2-206ENST00000534495 GCC2Q8IWJ2 1684 aa32.5■■■□□ 2.79
LMNB2-206ENST00000534495 PIK3C2BO00750 1634 aa32.49■■■□□ 2.79
LMNB2-206ENST00000534495 MED14O60244 1454 aa32.48■■■□□ 2.79
LMNB2-206ENST00000534495 RPRD2Q5VT52 1461 aaKnown RBP32.48■■■□□ 2.79
LMNB2-206ENST00000534495 ZNF335Q9H4Z2 1342 aaPredicted RBP32.48■■■□□ 2.79
LMNB2-206ENST00000534495 IQGAP3Q86VI3 1631 aa32.46■■■□□ 2.79
LMNB2-206ENST00000534495 KDM5AP29375 1690 aaKnown RBP32.45■■■□□ 2.79
LMNB2-206ENST00000534495 NPHP4O75161 1426 aaPredicted RBP32.43■■■□□ 2.78
LMNB2-206ENST00000534495 IDI1Q13907 227 aa32.43■■■□□ 2.78
LMNB2-206ENST00000534495 ARHGAP23Q9P227 1491 aa32.42■■■□□ 2.78
LMNB2-206ENST00000534495 SLIT1O75093 1534 aa32.42■■■□□ 2.78
LMNB2-206ENST00000534495 IQGAP1P46940 1657 aa32.42■■■□□ 2.78
LMNB2-206ENST00000534495 E9PCH4 1651 aa32.4■■■□□ 2.78
LMNB2-206ENST00000534495 IQSEC2Q5JU85 1478 aa32.4■■■□□ 2.78
LMNB2-206ENST00000534495 NUP155O75694 1391 aa32.38■■■□□ 2.77
LMNB2-206ENST00000534495 SLC52A1Q9NWF4 448 aa32.37■■■□□ 2.77
LMNB2-206ENST00000534495 SCAF11Q99590 1463 aaKnown RBP32.36■■■□□ 2.77
LMNB2-206ENST00000534495 STAG3Q9UJ98 1225 aa32.35■■■□□ 2.77
LMNB2-206ENST00000534495 NAIPQ13075 1403 aa32.34■■■□□ 2.77
LMNB2-206ENST00000534495 LTKP29376 864 aa32.34■■■□□ 2.77
LMNB2-206ENST00000534495 TMEM2Q9UHN6 1383 aa32.33■■■□□ 2.77
LMNB2-206ENST00000534495 ADGRB3O60242 1522 aa32.33■■■□□ 2.77
LMNB2-206ENST00000534495 TXNDC2Q86VQ3 553 aa32.31■■■□□ 2.76
LMNB2-206ENST00000534495 MYO5BQ9ULV0 1848 aa32.29■■■□□ 2.76
LMNB2-206ENST00000534495 EID1Q9Y6B2 187 aa32.28■■■□□ 2.76
LMNB2-206ENST00000534495 HFM1A2PYH4 1435 aa32.27■■■□□ 2.76
LMNB2-206ENST00000534495 CPS1P31327 1500 aa32.26■■■□□ 2.76
LMNB2-206ENST00000534495 TMEM131LA2VDJ0 1609 aa32.23■■■□□ 2.75
LMNB2-206ENST00000534495 STRCP1A6NGW2 1772 aa32.22■■■□□ 2.75
LMNB2-206ENST00000534495 SPHKAPQ2M3C7 1700 aa32.18■■■□□ 2.74
LMNB2-206ENST00000534495 ZFYVE9O95405 1425 aa32.15■■■□□ 2.74
LMNB2-206ENST00000534495 RIMS2Q9UQ26 1411 aa32.1■■■□□ 2.73
LMNB2-206ENST00000534495 UBAP1LF5GYI3 381 aa32.09■■■□□ 2.73
LMNB2-206ENST00000534495 CHGAP10645 457 aaKnown RBP32.09■■■□□ 2.73
LMNB2-206ENST00000534495 LRRC7Q96NW7 1537 aa32.07■■■□□ 2.72
LMNB2-206ENST00000534495 TRIM52Q96A61 297 aa32.07■■■□□ 2.72
LMNB2-206ENST00000534495 HDGFP51858 240 aaKnown RBP32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms