RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 OSBPP22059 807 aa5.54□□□□□ -1.52
CSDE1-216ENST00000534389 PPP4R3BQ5MIZ7 849 aa5.54□□□□□ -1.52
CSDE1-216ENST00000534389 POTEBQ6S5H4 581 aa5.54□□□□□ -1.52
CSDE1-216ENST00000534389 HS3ST6Q96QI5 342 aa5.54□□□□□ -1.52
CSDE1-216ENST00000534389 NEUROD2Q15784 382 aa5.53□□□□□ -1.52
CSDE1-216ENST00000534389 ZDHHC16Q969W1 377 aa5.53□□□□□ -1.52
CSDE1-216ENST00000534389 ZMYND10O75800 440 aa5.52□□□□□ -1.53
CSDE1-216ENST00000534389 PRIM1P49642 420 aaKnown RBP5.52□□□□□ -1.53
CSDE1-216ENST00000534389 EN1Q05925 392 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-216ENST00000534389 HIC1Q14526 733 aa5.52□□□□□ -1.53
CSDE1-216ENST00000534389 AK7Q96M32 723 aa5.52□□□□□ -1.53
CSDE1-216ENST00000534389 ADAM33Q9BZ11 813 aa5.52□□□□□ -1.53
CSDE1-216ENST00000534389 GNPATO15228 680 aa5.51□□□□□ -1.53
CSDE1-216ENST00000534389 BARGINQ6ZT62 677 aa5.51□□□□□ -1.53
CSDE1-216ENST00000534389 PTPREP23469 700 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 PTGDRQ13258 359 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 TSR1Q2NL82 804 aaKnown RBP5.49□□□□□ -1.53
CSDE1-216ENST00000534389 ZNF687Q8N1G0 1237 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 CERKQ8TCT0 537 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 KCNK17Q96T54 332 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 BCL2L12Q9HB09 334 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 CDHR5Q9HBB8 845 aa5.49□□□□□ -1.53
CSDE1-216ENST00000534389 MINK1Q8N4C8 1332 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-216ENST00000534389 MAP2K5Q13163 448 aa5.48□□□□□ -1.53
CSDE1-216ENST00000534389 TTLL12Q14166 644 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-216ENST00000534389 C6orf132Q5T0Z8 1188 aa5.48□□□□□ -1.53
CSDE1-216ENST00000534389 POTEEQ6S8J3 1075 aa5.48□□□□□ -1.53
CSDE1-216ENST00000534389 AXIN2Q9Y2T1 843 aa5.48□□□□□ -1.53
CSDE1-216ENST00000534389 PSEN2P49810 448 aa5.47□□□□□ -1.53
CSDE1-216ENST00000534389 ATP1B4Q9UN42 357 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-216ENST00000534389 ARHGAP33O14559 1287 aa5.46□□□□□ -1.54
CSDE1-216ENST00000534389 PBX2P40425 430 aa5.46□□□□□ -1.54
CSDE1-216ENST00000534389 CDAN1Q8IWY9 1227 aa5.46□□□□□ -1.54
CSDE1-216ENST00000534389 CCDC102AQ96A19 550 aa5.46□□□□□ -1.54
CSDE1-216ENST00000534389 DAXXQ9UER7 740 aaPredicted RBP5.46□□□□□ -1.54
CSDE1-216ENST00000534389 IRF6O14896 467 aa5.45□□□□□ -1.54
CSDE1-216ENST00000534389 COL9A1P20849 921 aa5.45□□□□□ -1.54
CSDE1-216ENST00000534389 DMRTA1Q5VZB9 504 aa5.45□□□□□ -1.54
CSDE1-216ENST00000534389 PPP1R3GB7ZBB8 358 aa5.44□□□□□ -1.54
CSDE1-216ENST00000534389 FECHP22830 423 aa5.44□□□□□ -1.54
CSDE1-216ENST00000534389 PADI6Q6TGC4 694 aa5.44□□□□□ -1.54
CSDE1-216ENST00000534389 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
CSDE1-216ENST00000534389 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
CSDE1-216ENST00000534389 TRIM66O15016 1216 aa5.43□□□□□ -1.54
CSDE1-216ENST00000534389 OATP04181 439 aa5.43□□□□□ -1.54
CSDE1-216ENST00000534389 BRPF1P55201 1214 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-216ENST00000534389 LSM11P83369 360 aaKnown RBP eCLIP5.43□□□□□ -1.54
CSDE1-216ENST00000534389 PDE4DQ08499 809 aa5.43□□□□□ -1.54
CSDE1-216ENST00000534389 PACS2Q86VP3 889 aa5.43□□□□□ -1.54
CSDE1-216ENST00000534389 RBM46Q8TBY0 533 aaKnown RBP5.43□□□□□ -1.54
CSDE1-216ENST00000534389 STAC3Q96MF2 364 aa5.43□□□□□ -1.54
CSDE1-216ENST00000534389 NPDC1Q9NQX5 325 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-216ENST00000534389 GPR37O15354 613 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 SLC4A3P48751 1232 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 PRSS12P56730 875 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 PROX2Q3B8N5 592 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 CDCA7LQ96GN5 454 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 ZBED2Q9BTP6 218 aa5.42□□□□□ -1.54
CSDE1-216ENST00000534389 NBPF26B4DH59 902 aa5.41□□□□□ -1.54
CSDE1-216ENST00000534389 HRCP23327 699 aa5.41□□□□□ -1.54
CSDE1-216ENST00000534389 HDGFP51858 240 aaKnown RBP5.41□□□□□ -1.54
CSDE1-216ENST00000534389 FAM161AQ3B820 660 aa5.41□□□□□ -1.54
CSDE1-216ENST00000534389 ANKRD13DQ6ZTN6 518 aa5.41□□□□□ -1.54
CSDE1-216ENST00000534389 GPBP1L1Q9HC44 474 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-216ENST00000534389 CLCN1P35523 988 aa5.4□□□□□ -1.54
CSDE1-216ENST00000534389 KDM4CQ9H3R0 1056 aa5.4□□□□□ -1.54
CSDE1-216ENST00000534389 TRIM6-TRIM34B2RNG4 842 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 MDM2Q00987 491 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-216ENST00000534389 TMEM132AQ24JP5 1023 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 ADGRD1Q6QNK2 874 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 SLC4A5Q9BY07 1137 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 RBM27Q9P2N5 1060 aaKnown RBP5.39□□□□□ -1.55
CSDE1-216ENST00000534389 PNMA3Q9UL41 463 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 VPS9D1Q9Y2B5 631 aa5.39□□□□□ -1.55
CSDE1-216ENST00000534389 TK2O00142 265 aa5.38□□□□□ -1.55
CSDE1-216ENST00000534389 RSPH4AQ5TD94 716 aa5.38□□□□□ -1.55
CSDE1-216ENST00000534389 NUDT18Q6ZVK8 323 aa5.38□□□□□ -1.55
CSDE1-216ENST00000534389 FAM198AQ9UFP1 575 aa5.38□□□□□ -1.55
CSDE1-216ENST00000534389 TSKSQ9UJT2 592 aa5.38□□□□□ -1.55
CSDE1-216ENST00000534389 RNF40O75150 1001 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 AMHR2Q16671 573 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 GIGYF2Q6Y7W6 1299 aaKnown RBP5.37□□□□□ -1.55
CSDE1-216ENST00000534389 METTL3Q86U44 580 aaKnown RBP5.37□□□□□ -1.55
CSDE1-216ENST00000534389 TTC13Q8NBP0 860 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 DDRGK1Q96HY6 314 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 GPCPD1Q9NPB8 672 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 KIAA1468Q9P260 1216 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 ADGRG1Q9Y653 693 aa5.37□□□□□ -1.55
CSDE1-216ENST00000534389 GOLGA8CPA6NN73 597 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 PARP9Q8IXQ6 854 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 NLRP7Q8WX94 980 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 TATDN2Q93075 761 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 NBPF3Q9H094 633 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 RABGEF1Q9UJ41 708 aa5.36□□□□□ -1.55
CSDE1-216ENST00000534389 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.35□□□□□ -1.55
CSDE1-216ENST00000534389 C3orf80F5H4A9 247 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 SMAPO00193 183 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 HRO43593 1189 aa5.35□□□□□ -1.55
CSDE1-216ENST00000534389 ONECUT3O60422 494 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms